RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 CMC4P56277 68 aaPredicted RBP10.54□□□□□ -0.72
COMMD4-216ENST00000567023 AP3S2P59780 193 aa10.54□□□□□ -0.72
COMMD4-216ENST00000567023 CCDC71LQ8N9Z2 235 aa10.54□□□□□ -0.72
COMMD4-216ENST00000567023 DUSP18Q8NEJ0 188 aa10.54□□□□□ -0.72
COMMD4-216ENST00000567023 PINX1Q96BK5 328 aaKnown RBP10.54□□□□□ -0.72
COMMD4-216ENST00000567023 GALNT14Q96FL9 552 aa10.54□□□□□ -0.72
COMMD4-216ENST00000567023 SCP2D1Q9UJQ7 156 aa10.54□□□□□ -0.72
COMMD4-216ENST00000567023 CORTO00230 105 aa10.53□□□□□ -0.72
COMMD4-216ENST00000567023 IFNA17P01571 189 aa10.53□□□□□ -0.72
COMMD4-216ENST00000567023 IGHV3-48P01763 117 aa10.53□□□□□ -0.72
COMMD4-216ENST00000567023 AKR1C2P52895 323 aa10.53□□□□□ -0.72
COMMD4-216ENST00000567023 AARDQ4LEZ3 155 aa10.53□□□□□ -0.72
COMMD4-216ENST00000567023 TOMM20LQ6UXN7 152 aa10.53□□□□□ -0.72
COMMD4-216ENST00000567023 TOMM5Q8N4H5 51 aa10.53□□□□□ -0.72
COMMD4-216ENST00000567023 STPG3Q8N7X2 389 aa10.53□□□□□ -0.72
COMMD4-216ENST00000567023 RNF183Q96D59 192 aa10.53□□□□□ -0.72
COMMD4-216ENST00000567023 SDHCQ99643 169 aaPredicted RBP10.53□□□□□ -0.72
COMMD4-216ENST00000567023 GINS3Q9BRX5 216 aa10.53□□□□□ -0.72
COMMD4-216ENST00000567023 MAP6D1Q9H9H5 199 aa10.53□□□□□ -0.72
COMMD4-216ENST00000567023 C14orf166Q9Y224 244 aaKnown RBP10.53□□□□□ -0.72
COMMD4-216ENST00000567023 ALMS1Q8TCU4 4167 aa10.53□□□□□ -0.72
COMMD4-216ENST00000567023 CDS2O95674 445 aa10.52□□□□□ -0.73
COMMD4-216ENST00000567023 TMEM50AO95807 157 aa10.52□□□□□ -0.73
COMMD4-216ENST00000567023 RNASE2P10153 161 aaKnown RBP10.52□□□□□ -0.73
COMMD4-216ENST00000567023 FAUP35544 74 aaKnown RBP10.52□□□□□ -0.73
COMMD4-216ENST00000567023 SUB1P53999 127 aaKnown RBP eCLIP10.52□□□□□ -0.73
COMMD4-216ENST00000567023 TRIM16LQ309B1 348 aa10.52□□□□□ -0.73
COMMD4-216ENST00000567023 DEFB135Q30KP9 77 aa10.52□□□□□ -0.73
COMMD4-216ENST00000567023 BSXQ3C1V8 233 aa10.52□□□□□ -0.73
COMMD4-216ENST00000567023 SP6Q3SY56 376 aa10.52□□□□□ -0.73
COMMD4-216ENST00000567023 SPINK9Q5DT21 86 aa10.52□□□□□ -0.73
COMMD4-216ENST00000567023 ZNF600Q6ZNG1 722 aa10.52□□□□□ -0.73
COMMD4-216ENST00000567023 SLC35G3Q8N808 338 aa10.52□□□□□ -0.73
COMMD4-216ENST00000567023 RRNAD1Q96FB5 475 aaKnown RBP10.52□□□□□ -0.73
COMMD4-216ENST00000567023 PDCD10Q9BUL8 212 aa10.52□□□□□ -0.73
COMMD4-216ENST00000567023 VSIRQ9H7M9 311 aa10.52□□□□□ -0.73
COMMD4-216ENST00000567023 NAA60Q9H7X0 242 aa10.52□□□□□ -0.73
COMMD4-216ENST00000567023 ZFAND3Q9H8U3 227 aa10.52□□□□□ -0.73
COMMD4-216ENST00000567023 MCUBQ9NWR8 336 aa10.52□□□□□ -0.73
COMMD4-216ENST00000567023 IGHV3-49A0A0A0MS15 119 aa10.51□□□□□ -0.73
COMMD4-216ENST00000567023 A0A0G2JRQ6 117 aa10.51□□□□□ -0.73
COMMD4-216ENST00000567023 A0A0J9YWU9 116 aa10.51□□□□□ -0.73
COMMD4-216ENST00000567023 CRYM-AS1A6NIL9 109 aa10.51□□□□□ -0.73
COMMD4-216ENST00000567023 PAFAH1B2P68402 229 aa10.51□□□□□ -0.73
COMMD4-216ENST00000567023 BAK1Q16611 211 aa10.51□□□□□ -0.73
COMMD4-216ENST00000567023 Q6ZRM9 215 aa10.51□□□□□ -0.73
COMMD4-216ENST00000567023 LINC00299Q6ZSB3 139 aa10.51□□□□□ -0.73
COMMD4-216ENST00000567023 LYG2Q86SG7 212 aa10.51□□□□□ -0.73
COMMD4-216ENST00000567023 APRG1Q8IVJ8 170 aa10.51□□□□□ -0.73
COMMD4-216ENST00000567023 FAM219AQ8IW50 185 aa10.51□□□□□ -0.73
COMMD4-216ENST00000567023 OR52E5Q8NH55 327 aa10.51□□□□□ -0.73
COMMD4-216ENST00000567023 GLYATL2Q8WU03 294 aa10.51□□□□□ -0.73
COMMD4-216ENST00000567023 TMEM230Q96A57 120 aa10.51□□□□□ -0.73
COMMD4-216ENST00000567023 SCGB3A2Q96PL1 93 aa10.51□□□□□ -0.73
COMMD4-216ENST00000567023 TMEM222Q9H0R3 208 aa10.51□□□□□ -0.73
COMMD4-216ENST00000567023 BIRC6Q9NR09 4857 aa10.5□□□□□ -0.73
COMMD4-216ENST00000567023 TEX13DA0A0J9YY54 714 aaPredicted RBP10.5□□□□□ -0.73
COMMD4-216ENST00000567023 OR5AC1P0C628 307 aa10.5□□□□□ -0.73
COMMD4-216ENST00000567023 EWSR1Q01844 656 aaKnown RBP eCLIP10.5□□□□□ -0.73
COMMD4-216ENST00000567023 LILRB2Q8N423 598 aa10.5□□□□□ -0.73
COMMD4-216ENST00000567023 OR4X1Q8NH49 305 aa10.5□□□□□ -0.73
COMMD4-216ENST00000567023 CSTL1Q9H114 145 aa10.5□□□□□ -0.73
COMMD4-216ENST00000567023 FNDC4Q9H6D8 234 aaPredicted RBP10.5□□□□□ -0.73
COMMD4-216ENST00000567023 PUS1Q9Y606 427 aaKnown RBP eCLIP10.5□□□□□ -0.73
COMMD4-216ENST00000567023 TRAV2A0A0B4J234 112 aa10.49□□□□□ -0.73
COMMD4-216ENST00000567023 A0A1B0GU03 582 aa10.49□□□□□ -0.73
COMMD4-216ENST00000567023 CLN5O75503 358 aa10.49□□□□□ -0.73
COMMD4-216ENST00000567023 APOHP02749 345 aaPredicted RBP10.49□□□□□ -0.73
COMMD4-216ENST00000567023 RPL35AP18077 110 aaKnown RBP10.49□□□□□ -0.73
COMMD4-216ENST00000567023 SPCS3P61009 180 aa10.49□□□□□ -0.73
COMMD4-216ENST00000567023 DHODHQ02127 395 aa10.49□□□□□ -0.73
COMMD4-216ENST00000567023 CNPY1Q3B7I2 92 aa10.49□□□□□ -0.73
COMMD4-216ENST00000567023 TCF24Q7RTU0 167 aa10.49□□□□□ -0.73
COMMD4-216ENST00000567023 LHFPL5Q8TAF8 219 aa10.49□□□□□ -0.73
COMMD4-216ENST00000567023 ST8SIA2Q92186 375 aa10.49□□□□□ -0.73
COMMD4-216ENST00000567023 RBPMSQ93062 196 aaKnown RBP10.49□□□□□ -0.73
COMMD4-216ENST00000567023 SLC25A21Q9BQT8 299 aaPredicted RBP10.49□□□□□ -0.73
COMMD4-216ENST00000567023 ENY2Q9NPA8 101 aa10.49□□□□□ -0.73
COMMD4-216ENST00000567023 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.49□□□□□ -0.73
COMMD4-216ENST00000567023 TMEM56-RWDD3S4R434 201 aa10.49□□□□□ -0.73
COMMD4-216ENST00000567023 KMT2AQ03164 3969 aa10.49□□□□□ -0.73
COMMD4-216ENST00000567023 IGKV3-7A0A075B6H7 116 aa10.48□□□□□ -0.73
COMMD4-216ENST00000567023 IGHV3OR16-13A0A075B7E8 117 aa10.48□□□□□ -0.73
COMMD4-216ENST00000567023 IGHV3-74A0A0B4J1X5 117 aa10.48□□□□□ -0.73
COMMD4-216ENST00000567023 DFFBO76075 338 aa10.48□□□□□ -0.73
COMMD4-216ENST00000567023 TFPI2P48307 235 aa10.48□□□□□ -0.73
COMMD4-216ENST00000567023 HOXA1P49639 335 aaPredicted RBP10.48□□□□□ -0.73
COMMD4-216ENST00000567023 SUPT4H1P63272 117 aaKnown RBP10.48□□□□□ -0.73
COMMD4-216ENST00000567023 ZNF124Q15973 351 aa10.48□□□□□ -0.73
COMMD4-216ENST00000567023 MLANAQ16655 118 aa10.48□□□□□ -0.73
COMMD4-216ENST00000567023 TRIQKQ629K1 86 aa10.48□□□□□ -0.73
COMMD4-216ENST00000567023 GBGT1Q8N5D6 347 aa10.48□□□□□ -0.73
COMMD4-216ENST00000567023 TMEM217Q8N7C4 229 aa10.48□□□□□ -0.73
COMMD4-216ENST00000567023 MS4A6AQ9H2W1 248 aa10.48□□□□□ -0.73
COMMD4-216ENST00000567023 MRPL36Q9P0J6 103 aaKnown RBP10.48□□□□□ -0.73
COMMD4-216ENST00000567023 TRAV30A0A087WSZ9 112 aa10.47□□□□□ -0.73
COMMD4-216ENST00000567023 CXorf65A6NEN9 183 aa10.47□□□□□ -0.73
COMMD4-216ENST00000567023 NUPR2A6NF83 97 aa10.47□□□□□ -0.73
COMMD4-216ENST00000567023 MPTX1A8MV57 137 aa10.47□□□□□ -0.73
COMMD4-216ENST00000567023 IL7P13232 177 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms