RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 CD3DP04234 171 aa10.96□□□□□ -0.65
RNF40-209ENST00000566703 PI3P19957 117 aa10.96□□□□□ -0.65
RNF40-209ENST00000566703 UCP1P25874 307 aa10.96□□□□□ -0.65
RNF40-209ENST00000566703 CRYBB3P26998 211 aa10.96□□□□□ -0.65
RNF40-209ENST00000566703 ETV6P41212 452 aa10.96□□□□□ -0.65
RNF40-209ENST00000566703 BSXQ3C1V8 233 aa10.96□□□□□ -0.65
RNF40-209ENST00000566703 SPINK9Q5DT21 86 aa10.96□□□□□ -0.65
RNF40-209ENST00000566703 OR52I2Q8NH67 350 aa10.96□□□□□ -0.65
RNF40-209ENST00000566703 GRAMD2BQ96HH9 432 aa10.96□□□□□ -0.65
RNF40-209ENST00000566703 METTL26Q96S19 204 aa10.96□□□□□ -0.65
RNF40-209ENST00000566703 ENY2Q9NPA8 101 aa10.96□□□□□ -0.65
RNF40-209ENST00000566703 ALMS1Q8TCU4 4167 aa10.95□□□□□ -0.66
RNF40-209ENST00000566703 K7EQG2 157 aa10.95□□□□□ -0.66
RNF40-209ENST00000566703 ZNF182P17025 639 aaPredicted RBP10.95□□□□□ -0.66
RNF40-209ENST00000566703 NANOS2P60321 138 aaKnown RBP10.95□□□□□ -0.66
RNF40-209ENST00000566703 SPCS3P61009 180 aa10.95□□□□□ -0.66
RNF40-209ENST00000566703 TRIM16LQ309B1 348 aa10.95□□□□□ -0.66
RNF40-209ENST00000566703 AARDQ4LEZ3 155 aa10.95□□□□□ -0.66
RNF40-209ENST00000566703 FAM219AQ8IW50 185 aa10.95□□□□□ -0.66
RNF40-209ENST00000566703 STHQ8IWL8 128 aa10.95□□□□□ -0.66
RNF40-209ENST00000566703 TMEM229BQ8NBD8 167 aa10.95□□□□□ -0.66
RNF40-209ENST00000566703 OR52E5Q8NH55 327 aa10.95□□□□□ -0.66
RNF40-209ENST00000566703 TMEM230Q96A57 120 aa10.95□□□□□ -0.66
RNF40-209ENST00000566703 NARS2Q96I59 477 aaKnown RBP10.95□□□□□ -0.66
RNF40-209ENST00000566703 FNDC4Q9H6D8 234 aaPredicted RBP10.95□□□□□ -0.66
RNF40-209ENST00000566703 IGHV3-66A0A0C4DH42 116 aa10.94□□□□□ -0.66
RNF40-209ENST00000566703 RPS10-NUDT3A0A1W2PQS6 291 aa10.94□□□□□ -0.66
RNF40-209ENST00000566703 CD74P04233 296 aa10.94□□□□□ -0.66
RNF40-209ENST00000566703 OPRK1P41145 380 aa10.94□□□□□ -0.66
RNF40-209ENST00000566703 HOXA1P49639 335 aaPredicted RBP10.94□□□□□ -0.66
RNF40-209ENST00000566703 SP6Q3SY56 376 aa10.94□□□□□ -0.66
RNF40-209ENST00000566703 LEMD1Q68G75 181 aa10.94□□□□□ -0.66
RNF40-209ENST00000566703 MORN3Q6PF18 240 aaPredicted RBP10.94□□□□□ -0.66
RNF40-209ENST00000566703 RPP25LQ8N5L8 163 aaKnown RBP10.94□□□□□ -0.66
RNF40-209ENST00000566703 C2CD4CQ8TF44 421 aa10.94□□□□□ -0.66
RNF40-209ENST00000566703 ABHD1Q96SE0 405 aa10.94□□□□□ -0.66
RNF40-209ENST00000566703 HRH4Q9H3N8 390 aa10.94□□□□□ -0.66
RNF40-209ENST00000566703 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.94□□□□□ -0.66
RNF40-209ENST00000566703 EXTL2Q9UBQ6 330 aa10.94□□□□□ -0.66
RNF40-209ENST00000566703 FBXL17Q9UF56 701 aa10.94□□□□□ -0.66
RNF40-209ENST00000566703 RABAC1Q9UI14 185 aa10.94□□□□□ -0.66
RNF40-209ENST00000566703 CDS2O95674 445 aa10.93□□□□□ -0.66
RNF40-209ENST00000566703 RAB3DO95716 219 aa10.93□□□□□ -0.66
RNF40-209ENST00000566703 SPP1P10451 314 aa10.93□□□□□ -0.66
RNF40-209ENST00000566703 HTR2BP41595 481 aa10.93□□□□□ -0.66
RNF40-209ENST00000566703 TAS2R19P59542 299 aa10.93□□□□□ -0.66
RNF40-209ENST00000566703 SSBP1Q04837 148 aaKnown RBP10.93□□□□□ -0.66
RNF40-209ENST00000566703 MLANAQ16655 118 aa10.93□□□□□ -0.66
RNF40-209ENST00000566703 FAM24BQ8N5W8 94 aa10.93□□□□□ -0.66
RNF40-209ENST00000566703 OR13C8Q8NGS7 320 aa10.93□□□□□ -0.66
RNF40-209ENST00000566703 MRPL36Q9P0J6 103 aaKnown RBP10.93□□□□□ -0.66
RNF40-209ENST00000566703 A0A0G2JRQ6 117 aa10.92□□□□□ -0.66
RNF40-209ENST00000566703 C11orf94C9JXX5 98 aa10.92□□□□□ -0.66
RNF40-209ENST00000566703 IGKV1-17P01599 117 aa10.92□□□□□ -0.66
RNF40-209ENST00000566703 GIG44P09565 113 aaPredicted RBP10.92□□□□□ -0.66
RNF40-209ENST00000566703 P2RY1P47900 373 aa10.92□□□□□ -0.66
RNF40-209ENST00000566703 EIF2B2P49770 351 aaKnown RBP10.92□□□□□ -0.66
RNF40-209ENST00000566703 AP2S1P53680 142 aaPredicted RBP10.92□□□□□ -0.66
RNF40-209ENST00000566703 MRPS10P82664 201 aaKnown RBP10.92□□□□□ -0.66
RNF40-209ENST00000566703 CTF1Q16619 201 aa10.92□□□□□ -0.66
RNF40-209ENST00000566703 RNASE12Q5GAN4 147 aaKnown RBP10.92□□□□□ -0.66
RNF40-209ENST00000566703 STEAP1BQ6NZ63 245 aa10.92□□□□□ -0.66
RNF40-209ENST00000566703 Q6ZRM9 215 aa10.92□□□□□ -0.66
RNF40-209ENST00000566703 TRPT1Q86TN4 253 aaKnown RBP10.92□□□□□ -0.66
RNF40-209ENST00000566703 RNASE11Q8TAA1 199 aaKnown RBP10.92□□□□□ -0.66
RNF40-209ENST00000566703 CACFD1Q9UGQ2 172 aa10.92□□□□□ -0.66
RNF40-209ENST00000566703 U3KQE9 123 aa10.92□□□□□ -0.66
RNF40-209ENST00000566703 TEX13DA0A0J9YY54 714 aaPredicted RBP10.91□□□□□ -0.66
RNF40-209ENST00000566703 GABARAPH6UMI1 98 aa10.91□□□□□ -0.66
RNF40-209ENST00000566703 DEDDO75618 318 aa10.91□□□□□ -0.66
RNF40-209ENST00000566703 GABARAPO95166 117 aa10.91□□□□□ -0.66
RNF40-209ENST00000566703 SLC25A4P12235 298 aa10.91□□□□□ -0.66
RNF40-209ENST00000566703 MIFP14174 115 aa10.91□□□□□ -0.66
RNF40-209ENST00000566703 PPP5CP53041 499 aa10.91□□□□□ -0.66
RNF40-209ENST00000566703 YPEL3P61236 119 aaPredicted RBP10.91□□□□□ -0.66
RNF40-209ENST00000566703 DHODHQ02127 395 aa10.91□□□□□ -0.66
RNF40-209ENST00000566703 SURF2Q15527 256 aaPredicted RBP10.91□□□□□ -0.66
RNF40-209ENST00000566703 SCGB2B2Q4G0G5 96 aa10.91□□□□□ -0.66
RNF40-209ENST00000566703 Q8NAQ8 132 aa10.91□□□□□ -0.66
RNF40-209ENST00000566703 STXBP6Q8NFX7 210 aa10.91□□□□□ -0.66
RNF40-209ENST00000566703 OR4D10Q8NGI6 311 aa10.91□□□□□ -0.66
RNF40-209ENST00000566703 OR1S2Q8NGQ3 325 aa10.91□□□□□ -0.66
RNF40-209ENST00000566703 MARCH1Q8TCQ1 289 aa10.91□□□□□ -0.66
RNF40-209ENST00000566703 RNASEH2CQ8TDP1 164 aaKnown RBP10.91□□□□□ -0.66
RNF40-209ENST00000566703 DCANP1Q8TF63 244 aa10.91□□□□□ -0.66
RNF40-209ENST00000566703 Q8WTZ3 238 aa10.91□□□□□ -0.66
RNF40-209ENST00000566703 GLYATL2Q8WU03 294 aa10.91□□□□□ -0.66
RNF40-209ENST00000566703 TMEM222Q9H0R3 208 aa10.91□□□□□ -0.66
RNF40-209ENST00000566703 HELTA6NFD8 242 aa10.9□□□□□ -0.66
RNF40-209ENST00000566703 ZNF705EA8MWA4 302 aaPredicted RBP10.9□□□□□ -0.66
RNF40-209ENST00000566703 DEFB4AO15263 64 aa10.9□□□□□ -0.66
RNF40-209ENST00000566703 IGLC1P0CG04 106 aa10.9□□□□□ -0.66
RNF40-209ENST00000566703 MEF2DQ14814 521 aa10.9□□□□□ -0.66
RNF40-209ENST00000566703 TIGITQ495A1 244 aa10.9□□□□□ -0.66
RNF40-209ENST00000566703 C2orf83Q53S99 150 aa10.9□□□□□ -0.66
RNF40-209ENST00000566703 ETFRF1Q6IPR1 90 aa10.9□□□□□ -0.66
RNF40-209ENST00000566703 NOXA1Q86UR1 476 aa10.9□□□□□ -0.66
RNF40-209ENST00000566703 RBPMSQ93062 196 aaKnown RBP10.9□□□□□ -0.66
RNF40-209ENST00000566703 RTBDNQ9BSG5 229 aaPredicted RBP10.9□□□□□ -0.66
RNF40-209ENST00000566703 SEPSECSQ9HD40 501 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms