RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 ZGRF1Q86YA3 2104 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 OR1L8Q8NGR8 309 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 FAM168AQ92567 244 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 C19orf24Q9BVV8 132 aa11.57□□□□□ -0.56
CDH1-209ENST00000566510 PLAUP00749 431 aa11.56□□□□□ -0.56
CDH1-209ENST00000566510 IGLV2-8P01709 118 aa11.56□□□□□ -0.56
CDH1-209ENST00000566510 NTF3P20783 257 aa11.56□□□□□ -0.56
CDH1-209ENST00000566510 C10orf55Q5SWW7 151 aa11.56□□□□□ -0.56
CDH1-209ENST00000566510 FAM19A2Q8N3H0 131 aa11.56□□□□□ -0.56
CDH1-209ENST00000566510 OR10X1Q8NGY0 326 aa11.56□□□□□ -0.56
CDH1-209ENST00000566510 FLYWCH2Q96CP2 140 aaKnown RBP11.56□□□□□ -0.56
CDH1-209ENST00000566510 SLC25A2Q9BXI2 301 aa11.56□□□□□ -0.56
CDH1-209ENST00000566510 NRN1Q9NPD7 142 aa11.56□□□□□ -0.56
CDH1-209ENST00000566510 ATMQ13315 3056 aa11.56□□□□□ -0.56
CDH1-209ENST00000566510 A6NNC1 897 aa11.56□□□□□ -0.56
CDH1-209ENST00000566510 DLL1O00548 723 aa11.56□□□□□ -0.56
CDH1-209ENST00000566510 AMY1AP04745 511 aa11.56□□□□□ -0.56
CDH1-209ENST00000566510 CD40P25942 277 aa11.56□□□□□ -0.56
CDH1-209ENST00000566510 NPIPB3Q92617 1050 aa11.56□□□□□ -0.56
CDH1-209ENST00000566510 GAL3ST2Q9H3Q3 398 aa11.56□□□□□ -0.56
CDH1-209ENST00000566510 ZNF331Q9NQX6 463 aaPredicted RBP11.56□□□□□ -0.56
CDH1-209ENST00000566510 ZNF355PQ9NSJ1 428 aa11.56□□□□□ -0.56
CDH1-209ENST00000566510 AMMECR1Q9Y4X0 333 aaPredicted RBP11.56□□□□□ -0.56
CDH1-209ENST00000566510 NKX6-3A6NJ46 265 aa11.55□□□□□ -0.56
CDH1-209ENST00000566510 FOSL1P15407 271 aa11.55□□□□□ -0.56
CDH1-209ENST00000566510 USF1P22415 310 aaPredicted RBP11.55□□□□□ -0.56
CDH1-209ENST00000566510 DIAPH2-AS1Q14236 149 aa11.55□□□□□ -0.56
CDH1-209ENST00000566510 OSR1Q8TAX0 266 aaPredicted RBP11.55□□□□□ -0.56
CDH1-209ENST00000566510 NDUFA4L2Q9NRX3 87 aa11.55□□□□□ -0.56
CDH1-209ENST00000566510 CDC42EP3Q9UKI2 254 aa11.55□□□□□ -0.56
CDH1-209ENST00000566510 LINC00312Q9Y6C7 94 aa11.55□□□□□ -0.56
CDH1-209ENST00000566510 PIEZO2Q9H5I5 2752 aa11.55□□□□□ -0.56
CDH1-209ENST00000566510 A0A1W2PS18 150 aa11.55□□□□□ -0.56
CDH1-209ENST00000566510 APCSP02743 223 aa11.55□□□□□ -0.56
CDH1-209ENST00000566510 REG1AP05451 166 aa11.55□□□□□ -0.56
CDH1-209ENST00000566510 C1orf185Q5T7R7 199 aa11.55□□□□□ -0.56
CDH1-209ENST00000566510 C10orf113Q5VZT2 155 aa11.55□□□□□ -0.56
CDH1-209ENST00000566510 LHFPL4Q7Z7J7 247 aa11.55□□□□□ -0.56
CDH1-209ENST00000566510 SGK494Q96LW2 274 aa11.55□□□□□ -0.56
CDH1-209ENST00000566510 IGF2BP2-AS1Q96M15 143 aa11.55□□□□□ -0.56
CDH1-209ENST00000566510 TMEM68Q96MH6 324 aa11.55□□□□□ -0.56
CDH1-209ENST00000566510 C20orf144Q9BQM9 153 aa11.55□□□□□ -0.56
CDH1-209ENST00000566510 PAXXQ9BUH6 204 aa11.55□□□□□ -0.56
CDH1-209ENST00000566510 H0YJW9 148 aa11.54□□□□□ -0.56
CDH1-209ENST00000566510 BMPR1BO00238 502 aa11.54□□□□□ -0.56
CDH1-209ENST00000566510 CYB5R2Q6BCY4 276 aa11.54□□□□□ -0.56
CDH1-209ENST00000566510 RBMXL3Q8N7X1 1067 aaKnown RBP11.54□□□□□ -0.56
CDH1-209ENST00000566510 KCNS1Q96KK3 526 aa11.54□□□□□ -0.56
CDH1-209ENST00000566510 FAM167A-AS1Q96KT0 104 aa11.54□□□□□ -0.56
CDH1-209ENST00000566510 RPH3ALQ9UNE2 315 aa11.54□□□□□ -0.56
CDH1-209ENST00000566510 SMIM27A0A1W2PRY6 76 aa11.54□□□□□ -0.56
CDH1-209ENST00000566510 HLA-DQA1P01909 254 aa11.54□□□□□ -0.56
CDH1-209ENST00000566510 RPLP1P05386 114 aaKnown RBP11.54□□□□□ -0.56
CDH1-209ENST00000566510 COMPP49747 757 aaPredicted RBP11.54□□□□□ -0.56
CDH1-209ENST00000566510 OR10J3Q5JRS4 329 aa11.54□□□□□ -0.56
CDH1-209ENST00000566510 ZNF833PQ6ZTB9 187 aa11.54□□□□□ -0.56
CDH1-209ENST00000566510 ZNF714Q96N38 554 aa11.54□□□□□ -0.56
CDH1-209ENST00000566510 MRPL32Q9BYC8 188 aaKnown RBP11.54□□□□□ -0.56
CDH1-209ENST00000566510 M0QZK8 103 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 APELAP0DMC3 54 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 MFAP2P55001 183 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 ATP5IP56385 69 aaPredicted RBP11.53□□□□□ -0.56
CDH1-209ENST00000566510 WT1-ASQ06250 92 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 WFDC8Q8IUA0 241 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 BLNKQ8WV28 456 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 CACNG8Q8WXS5 425 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 CCL17Q92583 94 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 CUL9Q8IWT3 2517 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 RIF1Q5UIP0 2472 aaKnown RBP11.53□□□□□ -0.56
CDH1-209ENST00000566510 SLAQ13239 276 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 PRR31Q5SQ13 230 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 PNKDQ8N490 385 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 WNT10AQ9GZT5 417 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 FNDC4Q9H6D8 234 aaPredicted RBP11.53□□□□□ -0.56
CDH1-209ENST00000566510 LINC00574Q9H8X3 128 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 ACACAQ13085 2346 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 POLEQ07864 2286 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 IZUMO1RA6ND01 250 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 TNFRSF1AP19438 455 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 ORM2P19652 201 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 TMEM200BQ69YZ2 307 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 PIP4P1Q86T03 277 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 OR4C13Q8NGP0 309 aa11.53□□□□□ -0.56
CDH1-209ENST00000566510 TACC2O95359 2948 aa11.52□□□□□ -0.57
CDH1-209ENST00000566510 ENSAO43768 121 aaKnown RBP11.52□□□□□ -0.57
CDH1-209ENST00000566510 ZNF324O75467 553 aaPredicted RBP11.52□□□□□ -0.57
CDH1-209ENST00000566510 CAMPP49913 170 aa11.52□□□□□ -0.57
CDH1-209ENST00000566510 GNG5P63218 68 aa11.52□□□□□ -0.57
CDH1-209ENST00000566510 COX19Q49B96 90 aa11.52□□□□□ -0.57
CDH1-209ENST00000566510 SPATA45Q537H7 98 aa11.52□□□□□ -0.57
CDH1-209ENST00000566510 RNF2Q99496 336 aa11.52□□□□□ -0.57
CDH1-209ENST00000566510 SAP30LQ9HAJ7 183 aa11.52□□□□□ -0.57
CDH1-209ENST00000566510 SLC25A17O43808 307 aa11.52□□□□□ -0.57
CDH1-209ENST00000566510 TEX36Q5VZQ5 186 aa11.52□□□□□ -0.57
CDH1-209ENST00000566510 TMEM108Q6UXF1 575 aa11.52□□□□□ -0.57
CDH1-209ENST00000566510 LINC00305Q7Z4B0 112 aa11.52□□□□□ -0.57
CDH1-209ENST00000566510 ATOH7Q8N100 152 aa11.52□□□□□ -0.57
CDH1-209ENST00000566510 BORCS7Q96B45 105 aa11.52□□□□□ -0.57
CDH1-209ENST00000566510 ZNF430Q9H8G1 570 aaPredicted RBP11.52□□□□□ -0.57
CDH1-209ENST00000566510 SH3BGRL2Q9UJC5 107 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms