RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 IL22RA2Q969J5 263 aa11.19□□□□□ -0.62
CMTM3-212ENST00000566121 RTBDNQ9BSG5 229 aaPredicted RBP11.19□□□□□ -0.62
CMTM3-212ENST00000566121 SELENOKQ9Y6D0 94 aa11.19□□□□□ -0.62
CMTM3-212ENST00000566121 TMEM56-RWDD3S4R434 201 aa11.19□□□□□ -0.62
CMTM3-212ENST00000566121 DISC1C4P0D8 188 aa11.18□□□□□ -0.62
CMTM3-212ENST00000566121 GSTZ1O43708 216 aaPredicted RBP11.18□□□□□ -0.62
CMTM3-212ENST00000566121 CRYBB3P26998 211 aa11.18□□□□□ -0.62
CMTM3-212ENST00000566121 TMBIM6P55061 237 aa11.18□□□□□ -0.62
CMTM3-212ENST00000566121 TRIM16LQ309B1 348 aa11.18□□□□□ -0.62
CMTM3-212ENST00000566121 Q6ZRM9 215 aa11.18□□□□□ -0.62
CMTM3-212ENST00000566121 LYG2Q86SG7 212 aa11.18□□□□□ -0.62
CMTM3-212ENST00000566121 MARCH1Q8TCQ1 289 aa11.18□□□□□ -0.62
CMTM3-212ENST00000566121 RNASEH2CQ8TDP1 164 aaKnown RBP11.18□□□□□ -0.62
CMTM3-212ENST00000566121 RBPMSQ93062 196 aaKnown RBP11.18□□□□□ -0.62
CMTM3-212ENST00000566121 PRRT1Q99946 306 aa11.18□□□□□ -0.62
CMTM3-212ENST00000566121 NAA60Q9H7X0 242 aa11.18□□□□□ -0.62
CMTM3-212ENST00000566121 UBQLN2Q9UHD9 624 aa11.18□□□□□ -0.62
CMTM3-212ENST00000566121 PIGBOS1A0A0B4J2F0 54 aa11.17□□□□□ -0.62
CMTM3-212ENST00000566121 MPTX1A8MV57 137 aa11.17□□□□□ -0.62
CMTM3-212ENST00000566121 CTDSP2O14595 271 aa11.17□□□□□ -0.62
CMTM3-212ENST00000566121 ZNF207O43670 478 aaKnown RBP11.17□□□□□ -0.62
CMTM3-212ENST00000566121 ETV6P41212 452 aa11.17□□□□□ -0.62
CMTM3-212ENST00000566121 ATP5IP56385 69 aaPredicted RBP11.17□□□□□ -0.62
CMTM3-212ENST00000566121 IZUMO4Q1ZYL8 232 aa11.17□□□□□ -0.62
CMTM3-212ENST00000566121 C2orf83Q53S99 150 aa11.17□□□□□ -0.62
CMTM3-212ENST00000566121 CEMP1Q6PRD7 247 aaPredicted RBP11.17□□□□□ -0.62
CMTM3-212ENST00000566121 TCF24Q7RTU0 167 aa11.17□□□□□ -0.62
CMTM3-212ENST00000566121 NOXA1Q86UR1 476 aa11.17□□□□□ -0.62
CMTM3-212ENST00000566121 PINX1Q96BK5 328 aaKnown RBP11.17□□□□□ -0.62
CMTM3-212ENST00000566121 GRAMD2BQ96HH9 432 aa11.17□□□□□ -0.62
CMTM3-212ENST00000566121 SCGB3A2Q96PL1 93 aa11.17□□□□□ -0.62
CMTM3-212ENST00000566121 SOSTQ9BQB4 213 aa11.17□□□□□ -0.62
CMTM3-212ENST00000566121 FNDC4Q9H6D8 234 aaPredicted RBP11.17□□□□□ -0.62
CMTM3-212ENST00000566121 SEPSECSQ9HD40 501 aaKnown RBP11.17□□□□□ -0.62
CMTM3-212ENST00000566121 ENY2Q9NPA8 101 aa11.17□□□□□ -0.62
CMTM3-212ENST00000566121 CCDC59Q9P031 241 aaKnown RBP11.17□□□□□ -0.62
CMTM3-212ENST00000566121 C14orf166Q9Y224 244 aaKnown RBP11.17□□□□□ -0.62
CMTM3-212ENST00000566121 PUS1Q9Y606 427 aaKnown RBP eCLIP11.17□□□□□ -0.62
CMTM3-212ENST00000566121 U3KQE9 123 aa11.17□□□□□ -0.62
CMTM3-212ENST00000566121 DNAH6Q9C0G6 4158 aa11.17□□□□□ -0.62
CMTM3-212ENST00000566121 IGHV3OR16-8A0A075B7F1 116 aa11.16□□□□□ -0.62
CMTM3-212ENST00000566121 A0A0J9YWU9 116 aa11.16□□□□□ -0.62
CMTM3-212ENST00000566121 A0A1B0GU03 582 aa11.16□□□□□ -0.62
CMTM3-212ENST00000566121 RPS10-NUDT3A0A1W2PQS6 291 aa11.16□□□□□ -0.62
CMTM3-212ENST00000566121 CRYM-AS1A6NIL9 109 aa11.16□□□□□ -0.62
CMTM3-212ENST00000566121 IGKV1-17P01599 117 aa11.16□□□□□ -0.62
CMTM3-212ENST00000566121 AKAIN1P0CW23 69 aa11.16□□□□□ -0.62
CMTM3-212ENST00000566121 SLC25A4P12235 298 aa11.16□□□□□ -0.62
CMTM3-212ENST00000566121 NPPCP23582 126 aa11.16□□□□□ -0.62
CMTM3-212ENST00000566121 DEFB135Q30KP9 77 aa11.16□□□□□ -0.62
CMTM3-212ENST00000566121 SP6Q3SY56 376 aa11.16□□□□□ -0.62
CMTM3-212ENST00000566121 SCGB2B2Q4G0G5 96 aa11.16□□□□□ -0.62
CMTM3-212ENST00000566121 TMEM41BQ5BJD5 291 aa11.16□□□□□ -0.62
CMTM3-212ENST00000566121 SELENOHQ8IZQ5 122 aaKnown RBP11.16□□□□□ -0.62
CMTM3-212ENST00000566121 DYNC2LI1Q8TCX1 351 aa11.16□□□□□ -0.62
CMTM3-212ENST00000566121 ST8SIA2Q92186 375 aa11.16□□□□□ -0.62
CMTM3-212ENST00000566121 MS4A6AQ9H2W1 248 aa11.16□□□□□ -0.62
CMTM3-212ENST00000566121 RSL24D1Q9UHA3 163 aaKnown RBP11.16□□□□□ -0.62
CMTM3-212ENST00000566121 A0A0G2JRQ6 117 aa11.15□□□□□ -0.62
CMTM3-212ENST00000566121 RGS5O15539 181 aa11.15□□□□□ -0.62
CMTM3-212ENST00000566121 OR5AC1P0C628 307 aa11.15□□□□□ -0.62
CMTM3-212ENST00000566121 PPP5CP53041 499 aa11.15□□□□□ -0.62
CMTM3-212ENST00000566121 YPEL3P61236 119 aaPredicted RBP11.15□□□□□ -0.62
CMTM3-212ENST00000566121 SPCS2Q15005 226 aa11.15□□□□□ -0.62
CMTM3-212ENST00000566121 LILRB2Q8N423 598 aa11.15□□□□□ -0.62
CMTM3-212ENST00000566121 C11orf68Q9H3H3 251 aaKnown RBP11.15□□□□□ -0.62
CMTM3-212ENST00000566121 KCNIP3Q9Y2W7 256 aa11.15□□□□□ -0.62
CMTM3-212ENST00000566121 KLK5Q9Y337 293 aaPredicted RBP11.15□□□□□ -0.62
CMTM3-212ENST00000566121 FRAS1Q86XX4 4008 aa11.14□□□□□ -0.63
CMTM3-212ENST00000566121 ANKRD20A5PA0PJZ0 165 aa11.14□□□□□ -0.63
CMTM3-212ENST00000566121 IGHV3-48P01763 117 aa11.14□□□□□ -0.63
CMTM3-212ENST00000566121 HOXA1P49639 335 aaPredicted RBP11.14□□□□□ -0.63
CMTM3-212ENST00000566121 NMSQ5H8A3 153 aa11.14□□□□□ -0.63
CMTM3-212ENST00000566121 ETFRF1Q6IPR1 90 aa11.14□□□□□ -0.63
CMTM3-212ENST00000566121 APRG1Q8IVJ8 170 aa11.14□□□□□ -0.63
CMTM3-212ENST00000566121 OR4C16Q8NGL9 310 aa11.14□□□□□ -0.63
CMTM3-212ENST00000566121 OR1S2Q8NGQ3 325 aa11.14□□□□□ -0.63
CMTM3-212ENST00000566121 LHFPL5Q8TAF8 219 aa11.14□□□□□ -0.63
CMTM3-212ENST00000566121 DEDD2Q8WXF8 326 aa11.14□□□□□ -0.63
CMTM3-212ENST00000566121 LINC00476Q8WZB0 136 aa11.14□□□□□ -0.63
CMTM3-212ENST00000566121 DIRAS2Q96HU8 199 aa11.14□□□□□ -0.63
CMTM3-212ENST00000566121 METTL26Q96S19 204 aa11.14□□□□□ -0.63
CMTM3-212ENST00000566121 SCP2D1Q9UJQ7 156 aa11.14□□□□□ -0.63
CMTM3-212ENST00000566121 APOHP02749 345 aaPredicted RBP11.13□□□□□ -0.63
CMTM3-212ENST00000566121 OPRK1P41145 380 aa11.13□□□□□ -0.63
CMTM3-212ENST00000566121 AP2S1P53680 142 aaPredicted RBP11.13□□□□□ -0.63
CMTM3-212ENST00000566121 PRSS54Q6PEW0 395 aa11.13□□□□□ -0.63
CMTM3-212ENST00000566121 GPR146Q96CH1 333 aa11.13□□□□□ -0.63
CMTM3-212ENST00000566121 U3KQ87 197 aa11.13□□□□□ -0.63
CMTM3-212ENST00000566121 A0A0B4J2A0 478 aa11.12□□□□□ -0.63
CMTM3-212ENST00000566121 K7EQG2 157 aa11.12□□□□□ -0.63
CMTM3-212ENST00000566121 DNASE2O00115 360 aaPredicted RBP11.12□□□□□ -0.63
CMTM3-212ENST00000566121 IGLC1P0CG04 106 aa11.12□□□□□ -0.63
CMTM3-212ENST00000566121 RPL35AP18077 110 aaKnown RBP11.12□□□□□ -0.63
CMTM3-212ENST00000566121 TCTAP57738 103 aa11.12□□□□□ -0.63
CMTM3-212ENST00000566121 EWSR1Q01844 656 aaKnown RBP eCLIP11.12□□□□□ -0.63
CMTM3-212ENST00000566121 TMEM187Q14656 261 aa11.12□□□□□ -0.63
CMTM3-212ENST00000566121 SPINK9Q5DT21 86 aa11.12□□□□□ -0.63
CMTM3-212ENST00000566121 RNASE12Q5GAN4 147 aaKnown RBP11.12□□□□□ -0.63
CMTM3-212ENST00000566121 Q8WTZ3 238 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms