RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 DAZ1Q9NQZ3 744 aaKnown RBP9.36□□□□□ -0.91
RNF40-208ENST00000565995 BET1LQ9NYM9 111 aa9.36□□□□□ -0.91
RNF40-208ENST00000565995 DYNC1H1Q14204 4646 aaKnown RBP9.35□□□□□ -0.91
RNF40-208ENST00000565995 C3orf85A0A1B0GTC6 90 aa9.35□□□□□ -0.91
RNF40-208ENST00000565995 OR4C46A6NHA9 309 aa9.35□□□□□ -0.91
RNF40-208ENST00000565995 CRYM-AS1A6NIL9 109 aa9.35□□□□□ -0.91
RNF40-208ENST00000565995 TGOLN2O43493 480 aa9.35□□□□□ -0.91
RNF40-208ENST00000565995 PRAF2O60831 178 aa9.35□□□□□ -0.91
RNF40-208ENST00000565995 HRASP01112 189 aa9.35□□□□□ -0.91
RNF40-208ENST00000565995 OR5AC1P0C628 307 aa9.35□□□□□ -0.91
RNF40-208ENST00000565995 OR4E1P0C645 316 aa9.35□□□□□ -0.91
RNF40-208ENST00000565995 DEFA4P12838 97 aa9.35□□□□□ -0.91
RNF40-208ENST00000565995 RPL35AP18077 110 aaKnown RBP9.35□□□□□ -0.91
RNF40-208ENST00000565995 GPR183P32249 361 aa9.35□□□□□ -0.91
RNF40-208ENST00000565995 CMC4P56277 68 aaPredicted RBP9.35□□□□□ -0.91
RNF40-208ENST00000565995 UBE2MP61081 183 aaKnown RBP9.35□□□□□ -0.91
RNF40-208ENST00000565995 SEC22CQ9BRL7 303 aa9.35□□□□□ -0.91
RNF40-208ENST00000565995 AIFM2Q9BRQ8 373 aa9.35□□□□□ -0.91
RNF40-208ENST00000565995 MARVELD1Q9BSK0 173 aa9.35□□□□□ -0.91
RNF40-208ENST00000565995 THYN1Q9P016 225 aa9.35□□□□□ -0.91
RNF40-208ENST00000565995 KCNIP3Q9Y2W7 256 aa9.35□□□□□ -0.91
RNF40-208ENST00000565995 IGLC7A0M8Q6 106 aa9.34□□□□□ -0.91
RNF40-208ENST00000565995 MPTX1A8MV57 137 aa9.34□□□□□ -0.91
RNF40-208ENST00000565995 NDUFA4O00483 81 aa9.34□□□□□ -0.91
RNF40-208ENST00000565995 REG1AP05451 166 aa9.34□□□□□ -0.91
RNF40-208ENST00000565995 SERPINE2P07093 398 aa9.34□□□□□ -0.91
RNF40-208ENST00000565995 HLA-GP17693 338 aa9.34□□□□□ -0.91
RNF40-208ENST00000565995 F2RP25116 425 aa9.34□□□□□ -0.91
RNF40-208ENST00000565995 OR2B8PP59922 312 aa9.34□□□□□ -0.91
RNF40-208ENST00000565995 SP6Q3SY56 376 aa9.34□□□□□ -0.91
RNF40-208ENST00000565995 SPSB3Q6PJ21 355 aa9.34□□□□□ -0.91
RNF40-208ENST00000565995 SPAG16Q8N0X2 631 aa9.34□□□□□ -0.91
RNF40-208ENST00000565995 RNASE11Q8TAA1 199 aaKnown RBP9.34□□□□□ -0.91
RNF40-208ENST00000565995 TP53RKQ96S44 253 aa9.34□□□□□ -0.91
RNF40-208ENST00000565995 IGHV3-35A0A0C4DH35 117 aa9.33□□□□□ -0.92
RNF40-208ENST00000565995 C9orf170A2RU37 121 aa9.33□□□□□ -0.92
RNF40-208ENST00000565995 C11orf94C9JXX5 98 aa9.33□□□□□ -0.92
RNF40-208ENST00000565995 SSNA1O43805 119 aa9.33□□□□□ -0.92
RNF40-208ENST00000565995 B3GALNT1O75752 331 aa9.33□□□□□ -0.92
RNF40-208ENST00000565995 SFT2D2O95562 160 aa9.33□□□□□ -0.92
RNF40-208ENST00000565995 SRPXP78539 464 aa9.33□□□□□ -0.92
RNF40-208ENST00000565995 DHRS2Q13268 280 aa9.33□□□□□ -0.92
RNF40-208ENST00000565995 POU2AF1Q16633 256 aa9.33□□□□□ -0.92
RNF40-208ENST00000565995 SSX9Q7RTT3 188 aa9.33□□□□□ -0.92
RNF40-208ENST00000565995 OR11H2Q8NH07 326 aa9.33□□□□□ -0.92
RNF40-208ENST00000565995 COQ8AQ8NI60 647 aa9.33□□□□□ -0.92
RNF40-208ENST00000565995 CD300LFQ8TDQ1 290 aa9.33□□□□□ -0.92
RNF40-208ENST00000565995 BSCL2Q96G97 398 aaPredicted RBP9.33□□□□□ -0.92
RNF40-208ENST00000565995 HRH4Q9H3N8 390 aa9.33□□□□□ -0.92
RNF40-208ENST00000565995 PRR13Q9NZ81 148 aa9.33□□□□□ -0.92
RNF40-208ENST00000565995 ALG5Q9Y673 324 aa9.33□□□□□ -0.92
RNF40-208ENST00000565995 DNAH11Q96DT5 4516 aa9.33□□□□□ -0.92
RNF40-208ENST00000565995 ABCA13Q86UQ4 5058 aa9.32□□□□□ -0.92
RNF40-208ENST00000565995 hCG_2014768A0A024R1R8 64 aa9.32□□□□□ -0.92
RNF40-208ENST00000565995 C15orf62A8K5M9 175 aa9.32□□□□□ -0.92
RNF40-208ENST00000565995 RBFOX2O43251 390 aaKnown RBP eCLIP9.32□□□□□ -0.921e-7■■■□□ 14.8
RNF40-208ENST00000565995 IL5P05113 134 aa9.32□□□□□ -0.92
RNF40-208ENST00000565995 LPAR6P43657 344 aa9.32□□□□□ -0.92
RNF40-208ENST00000565995 AKR1C2P52895 323 aa9.32□□□□□ -0.92
RNF40-208ENST00000565995 MFAP2P55001 183 aa9.32□□□□□ -0.92
RNF40-208ENST00000565995 SUPT4H1P63272 117 aaKnown RBP9.32□□□□□ -0.92
RNF40-208ENST00000565995 DHODHQ02127 395 aa9.32□□□□□ -0.92
RNF40-208ENST00000565995 TMEM268Q5VZI3 342 aa9.32□□□□□ -0.92
RNF40-208ENST00000565995 APRG1Q8IVJ8 170 aa9.32□□□□□ -0.92
RNF40-208ENST00000565995 OR5B3Q8NH48 314 aa9.32□□□□□ -0.92
RNF40-208ENST00000565995 ZNF431Q8TF32 576 aaPredicted RBP9.32□□□□□ -0.92
RNF40-208ENST00000565995 TMEM222Q9H0R3 208 aa9.32□□□□□ -0.92
RNF40-208ENST00000565995 FBXL17Q9UF56 701 aa9.32□□□□□ -0.92
RNF40-208ENST00000565995 A0A0B4J293 547 aa9.31□□□□□ -0.92
RNF40-208ENST00000565995 F8W735 103 aaPredicted RBP9.31□□□□□ -0.92
RNF40-208ENST00000565995 ERVK-16P61578 105 aa9.31□□□□□ -0.92
RNF40-208ENST00000565995 THOC7Q6I9Y2 204 aaKnown RBP9.31□□□□□ -0.92
RNF40-208ENST00000565995 LGI3Q8N145 548 aa9.31□□□□□ -0.92
RNF40-208ENST00000565995 ZNF414Q96IQ9 312 aa9.31□□□□□ -0.92
RNF40-208ENST00000565995 SMPXQ9UHP9 88 aa9.31□□□□□ -0.92
RNF40-208ENST00000565995 OR2T8A6NH00 312 aa9.3□□□□□ -0.92
RNF40-208ENST00000565995 SNRPGP15A8MWD9 76 aa9.3□□□□□ -0.92
RNF40-208ENST00000565995 UPK2O00526 184 aa9.3□□□□□ -0.92
RNF40-208ENST00000565995 CYB5BO43169 146 aa9.3□□□□□ -0.92
RNF40-208ENST00000565995 ATG12O94817 140 aa9.3□□□□□ -0.92
RNF40-208ENST00000565995 HPRT1P00492 218 aa9.3□□□□□ -0.92
RNF40-208ENST00000565995 RPA2P15927 270 aa9.3□□□□□ -0.92
RNF40-208ENST00000565995 UCP1P25874 307 aa9.3□□□□□ -0.92
RNF40-208ENST00000565995 TMEM187Q14656 261 aa9.3□□□□□ -0.92
RNF40-208ENST00000565995 ZNF124Q15973 351 aa9.3□□□□□ -0.92
RNF40-208ENST00000565995 FAM90A2PQ658T7 463 aa9.3□□□□□ -0.92
RNF40-208ENST00000565995 HSD17B13Q7Z5P4 300 aaPredicted RBP9.3□□□□□ -0.92
RNF40-208ENST00000565995 C12orf45Q8N5I9 185 aaPredicted RBP9.3□□□□□ -0.92
RNF40-208ENST00000565995 DMBX1Q8NFW5 382 aa9.3□□□□□ -0.92
RNF40-208ENST00000565995 CHRDL1Q9BU40 450 aa9.3□□□□□ -0.92
RNF40-208ENST00000565995 COMMD9Q9P000 198 aa9.3□□□□□ -0.92
RNF40-208ENST00000565995 TRAV3A0A0B4J244 114 aa9.29□□□□□ -0.92
RNF40-208ENST00000565995 PIGBOS1A0A0B4J2F0 54 aa9.29□□□□□ -0.92
RNF40-208ENST00000565995 C7orf66A4D0T2 115 aa9.29□□□□□ -0.92
RNF40-208ENST00000565995 IGLL5B9A064 214 aa9.29□□□□□ -0.92
RNF40-208ENST00000565995 CHEK1O14757 476 aa9.29□□□□□ -0.92
RNF40-208ENST00000565995 G6PCP35575 357 aa9.29□□□□□ -0.92
RNF40-208ENST00000565995 Q6ZNX1 250 aa9.29□□□□□ -0.92
RNF40-208ENST00000565995 CADM3Q8N126 398 aa9.29□□□□□ -0.92
RNF40-208ENST00000565995 SLC35G3Q8N808 338 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms