RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 C6orf201Q7Z4U5 140 aa4.21□□□□□ -1.74
CAPN3-214ENST00000565274 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.21□□□□□ -1.74
CAPN3-214ENST00000565274 RPS19BP1Q86WX3 136 aaKnown RBP4.21□□□□□ -1.74
CAPN3-214ENST00000565274 TMEM183AQ8IXX5 376 aa4.21□□□□□ -1.74
CAPN3-214ENST00000565274 DEFB119Q8N690 84 aa4.21□□□□□ -1.74
CAPN3-214ENST00000565274 CYB561D1Q8N8Q1 229 aa4.21□□□□□ -1.74
CAPN3-214ENST00000565274 SCCPDHQ8NBX0 429 aa4.21□□□□□ -1.74
CAPN3-214ENST00000565274 OR5A1Q8NGJ0 315 aa4.21□□□□□ -1.74
CAPN3-214ENST00000565274 OR10G7Q8NGN6 311 aa4.21□□□□□ -1.74
CAPN3-214ENST00000565274 OR2K2Q8NGT1 345 aa4.21□□□□□ -1.74
CAPN3-214ENST00000565274 FRZBQ92765 325 aa4.21□□□□□ -1.74
CAPN3-214ENST00000565274 RDH5Q92781 318 aa4.21□□□□□ -1.74
CAPN3-214ENST00000565274 HDHD3Q9BSH5 251 aaPredicted RBP4.21□□□□□ -1.74
CAPN3-214ENST00000565274 IFI27L2Q9H2X8 130 aa4.21□□□□□ -1.74
CAPN3-214ENST00000565274 LIME1Q9H400 295 aa4.21□□□□□ -1.74
CAPN3-214ENST00000565274 PLEKHF2Q9H8W4 249 aa4.21□□□□□ -1.74
CAPN3-214ENST00000565274 ZNF286AQ9HBT8 521 aa4.21□□□□□ -1.74
CAPN3-214ENST00000565274 ZNF586Q9NXT0 402 aa4.21□□□□□ -1.74
CAPN3-214ENST00000565274 CISD1Q9NZ45 108 aaKnown RBP4.21□□□□□ -1.74
CAPN3-214ENST00000565274 HIGD1AQ9Y241 93 aa4.21□□□□□ -1.74
CAPN3-214ENST00000565274 TRIOBPQ9H2D6 2365 aa4.21□□□□□ -1.74
CAPN3-214ENST00000565274 UNC13CQ8NB66 2214 aa4.21□□□□□ -1.74
CAPN3-214ENST00000565274 TNRC18O15417 2968 aaPredicted RBP4.2□□□□□ -1.74
CAPN3-214ENST00000565274 SPAG17Q6Q759 2223 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 CABIN1Q9Y6J0 2220 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 IGKV1-27A0A075B6S5 117 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 IGHV1-69-2A0A0G2JMI3 117 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 A0A1B0GV50 99 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 MED19A0JLT2 244 aaPredicted RBP4.2□□□□□ -1.74
CAPN3-214ENST00000565274 FAM24AA6NFZ4 105 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 ZNF850A8MQ14 1090 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 ZNF705GA8MUZ8 300 aaPredicted RBP4.2□□□□□ -1.74
CAPN3-214ENST00000565274 GEMIN2O14893 280 aaKnown RBP4.2□□□□□ -1.74
CAPN3-214ENST00000565274 SS18L1O75177 396 aaPredicted RBP4.2□□□□□ -1.74
CAPN3-214ENST00000565274 NAPSAO96009 420 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 APOA2P02652 100 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 MMP7P09237 267 aaPredicted RBP4.2□□□□□ -1.74
CAPN3-214ENST00000565274 BCL2P10415 239 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 PPIFP30405 207 aaKnown RBP4.2□□□□□ -1.74
CAPN3-214ENST00000565274 OR10J1P30954 320 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 G6PCP35575 357 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 ZNF134P52741 427 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 EMP1P54849 157 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 FXYD4P59646 89 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 HERV-K104P61576 105 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 TGFBR3Q03167 851 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 FAM27E3Q08E93 113 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 DAZAP2Q15038 168 aaPredicted RBP4.2□□□□□ -1.74
CAPN3-214ENST00000565274 PMVKQ15126 192 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 SP6Q3SY56 376 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 PHLDA2Q53GA4 152 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 LRRC10Q5BKY1 277 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 GFI1BQ5VTD9 330 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 FAM231DQ6ZW35 169 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 SLC25A26Q70HW3 274 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 LINC00596Q86U02 117 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 TGIF2LYQ8IUE0 185 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 ODF3L1Q8IXM7 274 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 TMEM252Q8N6L7 170 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 WDR31Q8NA23 367 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 ZFP62Q8NB50 900 aaPredicted RBP4.2□□□□□ -1.74
CAPN3-214ENST00000565274 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.2□□□□□ -1.74
CAPN3-214ENST00000565274 C8orf46Q8TAG6 207 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 BORCS8Q96FH0 119 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 CIB3Q96Q77 187 aaPredicted RBP4.2□□□□□ -1.74
CAPN3-214ENST00000565274 NAA38Q9BRA0 125 aaKnown RBP4.2□□□□□ -1.74
CAPN3-214ENST00000565274 PYGO2Q9BRQ0 406 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 AGMATQ9BSE5 352 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 OR2H1Q9GZK4 316 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 TMEM222Q9H0R3 208 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 RNASE7Q9H1E1 156 aaKnown RBP4.2□□□□□ -1.74
CAPN3-214ENST00000565274 OR2D2Q9H210 308 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 HES4Q9HCC6 221 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 BET1LQ9NYM9 111 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 NCOA6Q14686 2063 aaPredicted RBP4.2□□□□□ -1.74
CAPN3-214ENST00000565274 SZT2Q5T011 3432 aa4.2□□□□□ -1.74
CAPN3-214ENST00000565274 IGKV1-12A0A0C4DH73 117 aa4.19□□□□□ -1.74
CAPN3-214ENST00000565274 C3orf85A0A1B0GTC6 90 aa4.19□□□□□ -1.74
CAPN3-214ENST00000565274 H0YJW9 148 aa4.19□□□□□ -1.74
CAPN3-214ENST00000565274 CRXO43186 299 aaPredicted RBP4.19□□□□□ -1.74
CAPN3-214ENST00000565274 SSSCA1O60232 199 aa4.19□□□□□ -1.74
CAPN3-214ENST00000565274 IGKV1D-12P01611 117 aa4.19□□□□□ -1.74
CAPN3-214ENST00000565274 REG1AP05451 166 aa4.19□□□□□ -1.74
CAPN3-214ENST00000565274 FAM106CPP0CH98 169 aa4.19□□□□□ -1.74
CAPN3-214ENST00000565274 CT45A10P0DMU9 189 aa4.19□□□□□ -1.74
CAPN3-214ENST00000565274 CCL3P10147 92 aa4.19□□□□□ -1.74
CAPN3-214ENST00000565274 HOXD3P31249 432 aaPredicted RBP4.19□□□□□ -1.74
CAPN3-214ENST00000565274 ZNF83P51522 516 aa4.19□□□□□ -1.74
CAPN3-214ENST00000565274 DYNLT3P51808 116 aa4.19□□□□□ -1.74
CAPN3-214ENST00000565274 RBM11P57052 281 aaKnown RBP4.19□□□□□ -1.74
CAPN3-214ENST00000565274 ZNF92Q03936 586 aa4.19□□□□□ -1.74
CAPN3-214ENST00000565274 MPV17LQ2QL34 196 aa4.19□□□□□ -1.74
CAPN3-214ENST00000565274 FAM106AQ4KMX7 169 aa4.19□□□□□ -1.74
CAPN3-214ENST00000565274 C19orf54Q5BKX5 351 aa4.19□□□□□ -1.74
CAPN3-214ENST00000565274 NMSQ5H8A3 153 aa4.19□□□□□ -1.74
CAPN3-214ENST00000565274 TSPO2Q5TGU0 170 aa4.19□□□□□ -1.74
CAPN3-214ENST00000565274 ZNF880Q6PDB4 577 aa4.19□□□□□ -1.74
CAPN3-214ENST00000565274 PPP1R27Q86WC6 154 aa4.19□□□□□ -1.74
CAPN3-214ENST00000565274 C1orf158Q8N1D5 194 aa4.19□□□□□ -1.74
CAPN3-214ENST00000565274 DEFB123Q8N688 67 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms