RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 DUSP18Q8NEJ0 188 aa13.75□□□□□ -0.21
CLN6-204ENST00000564752 TRIM63Q969Q1 353 aa13.75□□□□□ -0.21
CLN6-204ENST00000564752 RBM38Q9H0Z9 239 aaKnown RBP13.75□□□□□ -0.21
CLN6-204ENST00000564752 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.75□□□□□ -0.21
CLN6-204ENST00000564752 KCNIP3Q9Y2W7 256 aa13.75□□□□□ -0.21
CLN6-204ENST00000564752 V9GYH0 126 aa13.75□□□□□ -0.21
CLN6-204ENST00000564752 TSPAN4O14817 238 aa13.74□□□□□ -0.21
CLN6-204ENST00000564752 AARDQ4LEZ3 155 aa13.74□□□□□ -0.21
CLN6-204ENST00000564752 OR52E5Q8NH55 327 aa13.74□□□□□ -0.21
CLN6-204ENST00000564752 IL22RA2Q969J5 263 aa13.74□□□□□ -0.21
CLN6-204ENST00000564752 TMEM230Q96A57 120 aa13.74□□□□□ -0.21
CLN6-204ENST00000564752 GALNT14Q96FL9 552 aa13.74□□□□□ -0.21
CLN6-204ENST00000564752 TMEM56-RWDD3S4R434 201 aa13.74□□□□□ -0.21
CLN6-204ENST00000564752 AKR1C4P17516 323 aa13.73□□□□□ -0.21
CLN6-204ENST00000564752 OPRK1P41145 380 aa13.73□□□□□ -0.21
CLN6-204ENST00000564752 KLF9Q13886 244 aaPredicted RBP13.73□□□□□ -0.21
CLN6-204ENST00000564752 PVRIGQ6DKI7 326 aa13.73□□□□□ -0.21
CLN6-204ENST00000564752 WFDC3Q8IUB2 231 aa13.73□□□□□ -0.21
CLN6-204ENST00000564752 TOMM5Q8N4H5 51 aa13.73□□□□□ -0.21
CLN6-204ENST00000564752 GPR146Q96CH1 333 aa13.73□□□□□ -0.21
CLN6-204ENST00000564752 ZNF414Q96IQ9 312 aa13.73□□□□□ -0.21
CLN6-204ENST00000564752 OR10C1Q96KK4 312 aa13.73□□□□□ -0.21
CLN6-204ENST00000564752 PRR13Q9NZ81 148 aa13.73□□□□□ -0.21
CLN6-204ENST00000564752 IGHV7-4-1A0A0J9YVY3 117 aa13.72□□□□□ -0.21
CLN6-204ENST00000564752 ZNF701M0R085 212 aaPredicted RBP13.72□□□□□ -0.21
CLN6-204ENST00000564752 ANXA3P12429 323 aa13.72□□□□□ -0.21
CLN6-204ENST00000564752 TMEM187Q14656 261 aa13.72□□□□□ -0.21
CLN6-204ENST00000564752 ZNF79Q15937 498 aa13.72□□□□□ -0.21
CLN6-204ENST00000564752 TMEM116Q8NCL8 245 aa13.72□□□□□ -0.21
CLN6-204ENST00000564752 GINS3Q9BRX5 216 aa13.72□□□□□ -0.21
CLN6-204ENST00000564752 HEYLQ9NQ87 328 aaPredicted RBP13.72□□□□□ -0.21
CLN6-204ENST00000564752 SMPXQ9UHP9 88 aa13.72□□□□□ -0.21
CLN6-204ENST00000564752 TP53TG1Q9Y2A0 90 aa13.72□□□□□ -0.21
CLN6-204ENST00000564752 IGHV3-49A0A0A0MS15 119 aa13.71□□□□□ -0.21
CLN6-204ENST00000564752 OR4C46A6NHA9 309 aa13.71□□□□□ -0.21
CLN6-204ENST00000564752 CEBPZOSA8MTT3 80 aa13.71□□□□□ -0.21
CLN6-204ENST00000564752 SCGB2A1O75556 95 aa13.71□□□□□ -0.21
CLN6-204ENST00000564752 SULT1A3P0DMM9 295 aa13.71□□□□□ -0.21
CLN6-204ENST00000564752 SULT1A4P0DMN0 295 aa13.71□□□□□ -0.21
CLN6-204ENST00000564752 HTR2BP41595 481 aa13.71□□□□□ -0.21
CLN6-204ENST00000564752 APOC4P55056 127 aa13.71□□□□□ -0.21
CLN6-204ENST00000564752 BSXQ3C1V8 233 aa13.71□□□□□ -0.21
CLN6-204ENST00000564752 ZNF600Q6ZNG1 722 aa13.71□□□□□ -0.21
CLN6-204ENST00000564752 Q6ZWC4 215 aa13.71□□□□□ -0.21
CLN6-204ENST00000564752 RHPN1-AS1Q9BWJ2 59 aa13.71□□□□□ -0.21
CLN6-204ENST00000564752 UBQLN2Q9UHD9 624 aa13.71□□□□□ -0.21
CLN6-204ENST00000564752 TRAV14DV4A0A0A6YYC5 116 aa13.7□□□□□ -0.22
CLN6-204ENST00000564752 CHEK1O14757 476 aa13.7□□□□□ -0.22
CLN6-204ENST00000564752 NXPH3O95157 252 aa13.7□□□□□ -0.22
CLN6-204ENST00000564752 BMI1P35226 326 aa13.7□□□□□ -0.22
CLN6-204ENST00000564752 SUPT4H1P63272 117 aaKnown RBP13.7□□□□□ -0.22
CLN6-204ENST00000564752 SRPXP78539 464 aa13.7□□□□□ -0.22
CLN6-204ENST00000564752 ODF3L2Q3SX64 289 aa13.7□□□□□ -0.22
CLN6-204ENST00000564752 TMED4Q7Z7H5 227 aa13.7□□□□□ -0.22
CLN6-204ENST00000564752 CCDC190Q86UF4 302 aa13.7□□□□□ -0.22
CLN6-204ENST00000564752 SLC24A4Q8NFF2 622 aa13.7□□□□□ -0.22
CLN6-204ENST00000564752 RNF2Q99496 336 aa13.7□□□□□ -0.22
CLN6-204ENST00000564752 FNDC4Q9H6D8 234 aaPredicted RBP13.7□□□□□ -0.22
CLN6-204ENST00000564752 CACFD1Q9UGQ2 172 aa13.7□□□□□ -0.22
CLN6-204ENST00000564752 A0A0B4J2A0 478 aa13.69□□□□□ -0.22
CLN6-204ENST00000564752 A0A0J9YWU9 116 aa13.69□□□□□ -0.22
CLN6-204ENST00000564752 RPS10-NUDT3A0A1W2PQS6 291 aa13.69□□□□□ -0.22
CLN6-204ENST00000564752 UBE2CO00762 179 aa13.69□□□□□ -0.22
CLN6-204ENST00000564752 SPRY2O43597 315 aa13.69□□□□□ -0.22
CLN6-204ENST00000564752 TMEM50AO95807 157 aa13.69□□□□□ -0.22
CLN6-204ENST00000564752 TNFRSF9Q07011 255 aa13.69□□□□□ -0.22
CLN6-204ENST00000564752 SPANXN2Q5MJ10 180 aa13.69□□□□□ -0.22
CLN6-204ENST00000564752 TOMM20LQ6UXN7 152 aa13.69□□□□□ -0.22
CLN6-204ENST00000564752 LGI3Q8N145 548 aa13.69□□□□□ -0.22
CLN6-204ENST00000564752 DEDD2Q8WXF8 326 aa13.69□□□□□ -0.22
CLN6-204ENST00000564752 SHPKQ9UHJ6 478 aa13.69□□□□□ -0.22
CLN6-204ENST00000564752 PUS1Q9Y606 427 aaKnown RBP eCLIP13.69□□□□□ -0.22
CLN6-204ENST00000564752 IGHV3OR16-13A0A075B7E8 117 aa13.68□□□□□ -0.22
CLN6-204ENST00000564752 IGHV3-74A0A0B4J1X5 117 aa13.68□□□□□ -0.22
CLN6-204ENST00000564752 KIR2DL5BA0A0G2JN68 375 aa13.68□□□□□ -0.22
CLN6-204ENST00000564752 KIR2DL5BA0A0G2JPC4 375 aa13.68□□□□□ -0.22
CLN6-204ENST00000564752 CLN5O75503 358 aa13.68□□□□□ -0.22
CLN6-204ENST00000564752 CCR6P51684 374 aa13.68□□□□□ -0.22
CLN6-204ENST00000564752 EWSR1Q01844 656 aaKnown RBP eCLIP13.68□□□□□ -0.227e-6■■□□□ 12.2
CLN6-204ENST00000564752 C2orf83Q53S99 150 aa13.68□□□□□ -0.22
CLN6-204ENST00000564752 LYG2Q86SG7 212 aa13.68□□□□□ -0.22
CLN6-204ENST00000564752 KIR2DL5AQ8N109 375 aa13.68□□□□□ -0.22
CLN6-204ENST00000564752 OR4X1Q8NH49 305 aa13.68□□□□□ -0.22
CLN6-204ENST00000564752 KIR2DL5BQ8NHK3 375 aa13.68□□□□□ -0.22
CLN6-204ENST00000564752 ZFAND3Q9H8U3 227 aa13.68□□□□□ -0.22
CLN6-204ENST00000564752 MRPL36Q9P0J6 103 aaKnown RBP13.68□□□□□ -0.22
CLN6-204ENST00000564752 KMT2AQ03164 3969 aa13.68□□□□□ -0.22
CLN6-204ENST00000564752 PIGBOS1A0A0B4J2F0 54 aa13.67□□□□□ -0.22
CLN6-204ENST00000564752 SMCO1Q147U7 214 aa13.67□□□□□ -0.22
CLN6-204ENST00000564752 DEFB135Q30KP9 77 aa13.67□□□□□ -0.22
CLN6-204ENST00000564752 NMSQ5H8A3 153 aa13.67□□□□□ -0.22
CLN6-204ENST00000564752 LYZL2Q7Z4W2 148 aa13.67□□□□□ -0.22
CLN6-204ENST00000564752 STPG3Q8N7X2 389 aa13.67□□□□□ -0.22
CLN6-204ENST00000564752 RNASEH2CQ8TDP1 164 aaKnown RBP13.67□□□□□ -0.22
CLN6-204ENST00000564752 LINC00476Q8WZB0 136 aa13.67□□□□□ -0.22
CLN6-204ENST00000564752 RNF183Q96D59 192 aa13.67□□□□□ -0.22
CLN6-204ENST00000564752 IGKV3-7A0A075B6H7 116 aa13.66□□□□□ -0.22
CLN6-204ENST00000564752 A0A1B0GU03 582 aa13.66□□□□□ -0.22
CLN6-204ENST00000564752 CXorf65A6NEN9 183 aa13.66□□□□□ -0.22
CLN6-204ENST00000564752 VAMP1P23763 118 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms