RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 FAM167A-AS1Q96KT0 104 aa12.55□□□□□ -0.4
GTF3C1-205ENST00000564747 C19orf24Q9BVV8 132 aa12.55□□□□□ -0.4
GTF3C1-205ENST00000564747 SERTAD4Q9NUC0 356 aa12.55□□□□□ -0.4
GTF3C1-205ENST00000564747 FBXL7Q9UJT9 491 aa12.55□□□□□ -0.4
GTF3C1-205ENST00000564747 LINC00312Q9Y6C7 94 aa12.55□□□□□ -0.4
GTF3C1-205ENST00000564747 ATMQ13315 3056 aa12.55□□□□□ -0.4
GTF3C1-205ENST00000564747 A0A1W2PRE2 83 aa12.55□□□□□ -0.4
GTF3C1-205ENST00000564747 ISLRO14498 428 aa12.55□□□□□ -0.4
GTF3C1-205ENST00000564747 PPOXP50336 477 aa12.55□□□□□ -0.4
GTF3C1-205ENST00000564747 TEX36Q5VZQ5 186 aa12.55□□□□□ -0.4
GTF3C1-205ENST00000564747 IGF2BP2-AS1Q96M15 143 aa12.55□□□□□ -0.4
GTF3C1-205ENST00000564747 SLC25A2Q9BXI2 301 aa12.55□□□□□ -0.4
GTF3C1-205ENST00000564747 PSMB11A5LHX3 300 aa12.54□□□□□ -0.4
GTF3C1-205ENST00000564747 H0YJW9 148 aa12.54□□□□□ -0.4
GTF3C1-205ENST00000564747 FCN3O75636 299 aa12.54□□□□□ -0.4
GTF3C1-205ENST00000564747 GPX1P07203 203 aa12.54□□□□□ -0.4
GTF3C1-205ENST00000564747 RPL8P62917 257 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-205ENST00000564747 RPL19P84098 196 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-205ENST00000564747 DIAPH2-AS1Q14236 149 aa12.54□□□□□ -0.4
GTF3C1-205ENST00000564747 OSR1Q8TAX0 266 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-205ENST00000564747 NAV3Q8IVL0 2385 aa12.54□□□□□ -0.4
GTF3C1-205ENST00000564747 ATP5IP56385 69 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-205ENST00000564747 COL5A1-AS1Q5SY13 56 aa12.54□□□□□ -0.4
GTF3C1-205ENST00000564747 FAM168AQ92567 244 aa12.54□□□□□ -0.4
GTF3C1-205ENST00000564747 RNF2Q99496 336 aa12.54□□□□□ -0.4
GTF3C1-205ENST00000564747 DNAJC4Q9NNZ3 241 aa12.54□□□□□ -0.4
GTF3C1-205ENST00000564747 BSNQ9UPA5 3926 aa12.54□□□□□ -0.4
GTF3C1-205ENST00000564747 PLXNB1O43157 2135 aa12.54□□□□□ -0.4
GTF3C1-205ENST00000564747 DIRC3C9JPN6 131 aa12.53□□□□□ -0.4
GTF3C1-205ENST00000564747 K7EM74 188 aa12.53□□□□□ -0.4
GTF3C1-205ENST00000564747 APOA2P02652 100 aa12.53□□□□□ -0.4
GTF3C1-205ENST00000564747 PYYP10082 97 aa12.53□□□□□ -0.4
GTF3C1-205ENST00000564747 UBE2L3P68036 154 aaKnown RBP12.53□□□□□ -0.4
GTF3C1-205ENST00000564747 ERHP84090 104 aaKnown RBP12.53□□□□□ -0.4
GTF3C1-205ENST00000564747 C10orf55Q5SWW7 151 aa12.53□□□□□ -0.4
GTF3C1-205ENST00000564747 RCHY1Q96PM5 261 aa12.53□□□□□ -0.4
GTF3C1-205ENST00000564747 TBL2Q9Y4P3 447 aaKnown RBP12.53□□□□□ -0.4
GTF3C1-205ENST00000564747 DLL1O00548 723 aa12.53□□□□□ -0.4
GTF3C1-205ENST00000564747 AMTP48728 403 aa12.53□□□□□ -0.4
GTF3C1-205ENST00000564747 WDR73Q6P4I2 378 aa12.53□□□□□ -0.4
GTF3C1-205ENST00000564747 FLYWCH2Q96CP2 140 aaKnown RBP12.53□□□□□ -0.4
GTF3C1-205ENST00000564747 SSBP3Q9BWW4 388 aaPredicted RBP12.53□□□□□ -0.4
GTF3C1-205ENST00000564747 FNDC4Q9H6D8 234 aaPredicted RBP12.53□□□□□ -0.4
GTF3C1-205ENST00000564747 SMIM27A0A1W2PRY6 76 aa12.52□□□□□ -0.4
GTF3C1-205ENST00000564747 MT-ND6P03923 174 aa12.52□□□□□ -0.4
GTF3C1-205ENST00000564747 WT1-ASQ06250 92 aa12.52□□□□□ -0.4
GTF3C1-205ENST00000564747 TMEM30BQ3MIR4 351 aa12.52□□□□□ -0.4
GTF3C1-205ENST00000564747 TMEM200BQ69YZ2 307 aa12.52□□□□□ -0.4
GTF3C1-205ENST00000564747 OR5AN1Q8NGI8 311 aa12.52□□□□□ -0.4
GTF3C1-205ENST00000564747 CACNG8Q8WXS5 425 aa12.52□□□□□ -0.4
GTF3C1-205ENST00000564747 GAL3ST2Q9H3Q3 398 aa12.52□□□□□ -0.4
GTF3C1-205ENST00000564747 TFPI2P48307 235 aa12.52□□□□□ -0.41
GTF3C1-205ENST00000564747 CBY1Q9Y3M2 126 aa12.52□□□□□ -0.41
GTF3C1-205ENST00000564747 CGB1A6NKQ9 187 aa12.52□□□□□ -0.41
GTF3C1-205ENST00000564747 ZNF253O75346 499 aa12.52□□□□□ -0.41
GTF3C1-205ENST00000564747 IGFL3Q6UXB1 125 aa12.52□□□□□ -0.41
GTF3C1-205ENST00000564747 NPIPB3Q92617 1050 aa12.52□□□□□ -0.41
GTF3C1-205ENST00000564747 ZNF714Q96N38 554 aa12.52□□□□□ -0.41
GTF3C1-205ENST00000564747 MRPL32Q9BYC8 188 aaKnown RBP12.52□□□□□ -0.41
GTF3C1-205ENST00000564747 NRN1Q9NPD7 142 aa12.52□□□□□ -0.41
GTF3C1-205ENST00000564747 ZNF355PQ9NSJ1 428 aa12.52□□□□□ -0.41
GTF3C1-205ENST00000564747 TRAV34A0A0B4J273 112 aa12.51□□□□□ -0.41
GTF3C1-205ENST00000564747 NKX6-3A6NJ46 265 aa12.51□□□□□ -0.41
GTF3C1-205ENST00000564747 BMPR1BO00238 502 aa12.51□□□□□ -0.41
GTF3C1-205ENST00000564747 PMCHP20382 165 aa12.51□□□□□ -0.41
GTF3C1-205ENST00000564747 SRIP30626 198 aa12.51□□□□□ -0.41
GTF3C1-205ENST00000564747 CEACAM8P31997 349 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-205ENST00000564747 SPATA45Q537H7 98 aa12.51□□□□□ -0.41
GTF3C1-205ENST00000564747 TMEM177Q53S58 311 aa12.51□□□□□ -0.41
GTF3C1-205ENST00000564747 PATE2Q6UY27 113 aa12.51□□□□□ -0.41
GTF3C1-205ENST00000564747 Q6ZS92 163 aa12.51□□□□□ -0.41
GTF3C1-205ENST00000564747 MRPL36Q9P0J6 103 aaKnown RBP12.51□□□□□ -0.41
GTF3C1-205ENST00000564747 CDC42EP3Q9UKI2 254 aa12.51□□□□□ -0.41
GTF3C1-205ENST00000564747 AKAP13Q12802 2813 aa12.51□□□□□ -0.41
GTF3C1-205ENST00000564747 PKDREJQ9NTG1 2253 aa12.51□□□□□ -0.41
GTF3C1-205ENST00000564747 A0A1W2PS18 150 aa12.51□□□□□ -0.41
GTF3C1-205ENST00000564747 COX7A2P2O60397 106 aa12.51□□□□□ -0.41
GTF3C1-205ENST00000564747 AMY1AP04745 511 aa12.51□□□□□ -0.41
GTF3C1-205ENST00000564747 OR10J3Q5JRS4 329 aa12.51□□□□□ -0.41
GTF3C1-205ENST00000564747 Q8N976 141 aa12.51□□□□□ -0.41
GTF3C1-205ENST00000564747 KCNS1Q96KK3 526 aa12.51□□□□□ -0.41
GTF3C1-205ENST00000564747 PCNX1Q96RV3 2341 aa12.5□□□□□ -0.41
GTF3C1-205ENST00000564747 DMRTA1Q5VZB9 504 aa12.5□□□□□ -0.41
GTF3C1-205ENST00000564747 OR10X1Q8NGY0 326 aa12.5□□□□□ -0.41
GTF3C1-205ENST00000564747 H1FXQ92522 213 aaKnown RBP12.5□□□□□ -0.41
GTF3C1-205ENST00000564747 ZFP30Q9Y2G7 519 aa12.5□□□□□ -0.41
GTF3C1-205ENST00000564747 AMMECR1Q9Y4X0 333 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-205ENST00000564747 TNFRSF1AP19438 455 aa12.5□□□□□ -0.41
GTF3C1-205ENST00000564747 USF1P22415 310 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-205ENST00000564747 MMDQ15546 238 aa12.5□□□□□ -0.41
GTF3C1-205ENST00000564747 C10orf113Q5VZT2 155 aa12.5□□□□□ -0.41
GTF3C1-205ENST00000564747 PAXXQ9BUH6 204 aa12.5□□□□□ -0.41
GTF3C1-205ENST00000564747 C17orf100A8MU93 164 aa12.49□□□□□ -0.41
GTF3C1-205ENST00000564747 PLAUP00749 431 aa12.49□□□□□ -0.41
GTF3C1-205ENST00000564747 CTRLP40313 264 aa12.49□□□□□ -0.41
GTF3C1-205ENST00000564747 MEF2CQ06413 473 aaPredicted RBP12.49□□□□□ -0.41
GTF3C1-205ENST00000564747 ADIPOQQ15848 244 aa12.49□□□□□ -0.41
GTF3C1-205ENST00000564747 WFDC8Q8IUA0 241 aa12.49□□□□□ -0.41
GTF3C1-205ENST00000564747 RBMXL3Q8N7X1 1067 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-205ENST00000564747 NUP37Q8NFH4 326 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms