RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 FAM167A-AS1Q96KT0 104 aa18.03■□□□□ 0.48
SPSB3-206ENST00000564709 ASPHD1Q5U4P2 390 aa18.02■□□□□ 0.48
SPSB3-206ENST00000564709 PNKDQ8N490 385 aa18.02■□□□□ 0.48
SPSB3-206ENST00000564709 LINC00311Q8N616 119 aa18.02■□□□□ 0.48
SPSB3-206ENST00000564709 IGHV1-69-2A0A0G2JMI3 117 aa18.01■□□□□ 0.47
SPSB3-206ENST00000564709 A0A1W2PPI3 338 aa18.01■□□□□ 0.47
SPSB3-206ENST00000564709 PLAUP00749 431 aa18.01■□□□□ 0.47
SPSB3-206ENST00000564709 IER3P46695 156 aa18.01■□□□□ 0.47
SPSB3-206ENST00000564709 C19orf35Q6ZS72 473 aa18.01■□□□□ 0.47
SPSB3-206ENST00000564709 OR4A5Q8NH83 315 aa18.01■□□□□ 0.47
SPSB3-206ENST00000564709 ZNF596Q8TC21 504 aa18.01■□□□□ 0.47
SPSB3-206ENST00000564709 C19orf24Q9BVV8 132 aa18.01■□□□□ 0.47
SPSB3-206ENST00000564709 MRPL18Q9H0U6 180 aaKnown RBP18.01■□□□□ 0.47
SPSB3-206ENST00000564709 A0A087X0M5 115 aa18.01■□□□□ 0.47
SPSB3-206ENST00000564709 A0A1B0GX30 115 aa18.01■□□□□ 0.47
SPSB3-206ENST00000564709 COX7A2P2O60397 106 aa18.01■□□□□ 0.47
SPSB3-206ENST00000564709 RUSC1-AS1Q66K80 236 aa18.01■□□□□ 0.47
SPSB3-206ENST00000564709 FAM71F2Q6NXP2 309 aa18.01■□□□□ 0.47
SPSB3-206ENST00000564709 ASCL5Q7RTU5 278 aa18.01■□□□□ 0.47
SPSB3-206ENST00000564709 NHLRC2Q8NBF2 726 aa18.01■□□□□ 0.47
SPSB3-206ENST00000564709 DNAJC4Q9NNZ3 241 aa18.01■□□□□ 0.47
SPSB3-206ENST00000564709 GATCO43716 136 aaKnown RBP18■□□□□ 0.47
SPSB3-206ENST00000564709 GCGP01275 180 aa18■□□□□ 0.47
SPSB3-206ENST00000564709 ZNF664Q8N3J9 261 aa18■□□□□ 0.47
SPSB3-206ENST00000564709 MRPL32Q9BYC8 188 aaKnown RBP18■□□□□ 0.47
SPSB3-206ENST00000564709 ZNF355PQ9NSJ1 428 aa18■□□□□ 0.47
SPSB3-206ENST00000564709 ZMAT5Q9UDW3 170 aaKnown RBP18■□□□□ 0.47
SPSB3-206ENST00000564709 IGKV1D-37A0A075B6S9 117 aa18■□□□□ 0.47
SPSB3-206ENST00000564709 MGST1P10620 155 aaKnown RBP18■□□□□ 0.47
SPSB3-206ENST00000564709 TCL1AP56279 114 aa18■□□□□ 0.47
SPSB3-206ENST00000564709 SLC35B1P78383 322 aa18■□□□□ 0.47
SPSB3-206ENST00000564709 MRGPRG-AS1Q2M3A8 158 aa18■□□□□ 0.47
SPSB3-206ENST00000564709 VMA21Q3ZAQ7 101 aa18■□□□□ 0.47
SPSB3-206ENST00000564709 HCP5Q6MZN7 132 aa18■□□□□ 0.47
SPSB3-206ENST00000564709 C11orf42Q8N5U0 333 aa18■□□□□ 0.47
SPSB3-206ENST00000564709 INS-IGF2F8WCM5 200 aa17.99■□□□□ 0.47
SPSB3-206ENST00000564709 FAM87AP0C7U9 286 aa17.99■□□□□ 0.47
SPSB3-206ENST00000564709 CNTFRP26992 372 aa17.99■□□□□ 0.47
SPSB3-206ENST00000564709 TIGITQ495A1 244 aa17.99■□□□□ 0.47
SPSB3-206ENST00000564709 PATE2Q6UY27 113 aa17.99■□□□□ 0.47
SPSB3-206ENST00000564709 LINC00479Q96M42 142 aa17.99■□□□□ 0.47
SPSB3-206ENST00000564709 NGBQ9NPG2 151 aa17.99■□□□□ 0.47
SPSB3-206ENST00000564709 A0A1W2PRE2 83 aa17.99■□□□□ 0.47
SPSB3-206ENST00000564709 C10orf113Q5VZT2 155 aa17.99■□□□□ 0.47
SPSB3-206ENST00000564709 LHFPL4Q7Z7J7 247 aa17.99■□□□□ 0.47
SPSB3-206ENST00000564709 C8orf31Q8N9H6 132 aa17.99■□□□□ 0.47
SPSB3-206ENST00000564709 TMEM133Q9H2Q1 129 aa17.99■□□□□ 0.47
SPSB3-206ENST00000564709 KAAG1Q9UBP8 84 aa17.99■□□□□ 0.47
SPSB3-206ENST00000564709 TP53TG3Q9ULZ0 132 aa17.99■□□□□ 0.47
SPSB3-206ENST00000564709 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.98■□□□□ 0.47
SPSB3-206ENST00000564709 SNURFLB1AK76 121 aa17.98■□□□□ 0.47
SPSB3-206ENST00000564709 FCN1O00602 326 aa17.98■□□□□ 0.47
SPSB3-206ENST00000564709 MOSP00540 346 aa17.98■□□□□ 0.47
SPSB3-206ENST00000564709 IGLV2-8P01709 118 aa17.98■□□□□ 0.47
SPSB3-206ENST00000564709 ZNF137PP52743 207 aa17.98■□□□□ 0.47
SPSB3-206ENST00000564709 IGF2BP2-AS1Q96M15 143 aa17.98■□□□□ 0.47
SPSB3-206ENST00000564709 RELNP78509 3460 aa17.98■□□□□ 0.47
SPSB3-206ENST00000564709 TACC2O95359 2948 aa17.98■□□□□ 0.47
SPSB3-206ENST00000564709 LRBAP50851 2863 aa17.98■□□□□ 0.47
SPSB3-206ENST00000564709 TCRBV4S1A1TA0A5B7 111 aa17.98■□□□□ 0.47
SPSB3-206ENST00000564709 SUB1P53999 127 aaKnown RBP eCLIP17.98■□□□□ 0.47
SPSB3-206ENST00000564709 MISP3Q96FF7 219 aa17.98■□□□□ 0.47
SPSB3-206ENST00000564709 TRAV9-1A0A075B6T8 112 aa17.97■□□□□ 0.47
SPSB3-206ENST00000564709 IGHV3-21A0A0B4J1V1 117 aa17.97■□□□□ 0.47
SPSB3-206ENST00000564709 MALRD1Q5VYJ5 2156 aa17.97■□□□□ 0.47
SPSB3-206ENST00000564709 F2Z2F3 143 aa17.97■□□□□ 0.47
SPSB3-206ENST00000564709 PPOXP50336 477 aa17.97■□□□□ 0.47
SPSB3-206ENST00000564709 ST6GALNAC3Q8NDV1 305 aa17.97■□□□□ 0.47
SPSB3-206ENST00000564709 CMTM2Q8TAZ6 248 aa17.97■□□□□ 0.47
SPSB3-206ENST00000564709 LINC01560Q8TB33 94 aa17.97■□□□□ 0.47
SPSB3-206ENST00000564709 APOBEC3AP31941 199 aaPredicted RBP17.96■□□□□ 0.47
SPSB3-206ENST00000564709 PAXXQ9BUH6 204 aa17.96■□□□□ 0.47
SPSB3-206ENST00000564709 PTPRQQ9UMZ3 2332 aa17.96■□□□□ 0.47
SPSB3-206ENST00000564709 MC5RP33032 325 aa17.95■□□□□ 0.46
SPSB3-206ENST00000564709 LINC00310P59036 64 aa17.95■□□□□ 0.46
SPSB3-206ENST00000564709 SELENOTP62341 195 aa17.95■□□□□ 0.46
SPSB3-206ENST00000564709 SSX2Q16385 188 aa17.95■□□□□ 0.46
SPSB3-206ENST00000564709 TNXAQ16473 311 aa17.95■□□□□ 0.46
SPSB3-206ENST00000564709 COL25A1Q9BXS0 654 aaPredicted RBP17.95■□□□□ 0.46
SPSB3-206ENST00000564709 SERTAD4Q9NUC0 356 aa17.95■□□□□ 0.46
SPSB3-206ENST00000564709 SSUH2Q9Y2M2 353 aa17.95■□□□□ 0.46
SPSB3-206ENST00000564709 TPRP12270 2363 aaKnown RBP17.95■□□□□ 0.46
SPSB3-206ENST00000564709 DCHS2Q6V1P9 2916 aa17.95■□□□□ 0.46
SPSB3-206ENST00000564709 IGLC7A0M8Q6 106 aa17.95■□□□□ 0.46
SPSB3-206ENST00000564709 SCGB1D1O95968 90 aa17.95■□□□□ 0.46
SPSB3-206ENST00000564709 CA1P00915 261 aaPredicted RBP17.95■□□□□ 0.46
SPSB3-206ENST00000564709 CD3EP07766 207 aa17.95■□□□□ 0.46
SPSB3-206ENST00000564709 CRISP2P16562 243 aa17.95■□□□□ 0.46
SPSB3-206ENST00000564709 MFAP2P55001 183 aa17.95■□□□□ 0.46
SPSB3-206ENST00000564709 SSX8Q7RTT4 187 aa17.95■□□□□ 0.46
SPSB3-206ENST00000564709 REC114Q7Z4M0 266 aa17.95■□□□□ 0.46
SPSB3-206ENST00000564709 RNF2Q99496 336 aa17.95■□□□□ 0.46
SPSB3-206ENST00000564709 SCNM1Q9BWG6 230 aa17.95■□□□□ 0.46
SPSB3-206ENST00000564709 IGHV2-26A0A0B4J1V2 119 aa17.94■□□□□ 0.46
SPSB3-206ENST00000564709 C22orf46C9J442 243 aa17.94■□□□□ 0.46
SPSB3-206ENST00000564709 CD33P20138 364 aa17.94■□□□□ 0.46
SPSB3-206ENST00000564709 BPIFB3P59826 476 aa17.94■□□□□ 0.46
SPSB3-206ENST00000564709 IBA57Q5T440 356 aaKnown RBP17.94■□□□□ 0.46
SPSB3-206ENST00000564709 OR1L4Q8NGR5 311 aa17.94■□□□□ 0.46
SPSB3-206ENST00000564709 ZZEF1O43149 2961 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms