RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 COPZ2Q9P299 210 aa17.47■□□□□ 0.39
NME3-206ENST00000564252 CD74P04233 296 aa17.46■□□□□ 0.39
NME3-206ENST00000564252 UCP1P25874 307 aa17.46■□□□□ 0.39
NME3-206ENST00000564252 HOXA1P49639 335 aaPredicted RBP17.46■□□□□ 0.39
NME3-206ENST00000564252 NANOS2P60321 138 aaKnown RBP17.46■□□□□ 0.39
NME3-206ENST00000564252 TRIM16LQ309B1 348 aa17.46■□□□□ 0.39
NME3-206ENST00000564252 LEMD1Q68G75 181 aa17.46■□□□□ 0.39
NME3-206ENST00000564252 OR13C8Q8NGS7 320 aa17.46■□□□□ 0.39
NME3-206ENST00000564252 TERB2Q8NHR7 220 aa17.46■□□□□ 0.39
NME3-206ENST00000564252 ZFAND1Q8TCF1 268 aa17.46■□□□□ 0.39
NME3-206ENST00000564252 TMEM231Q9H6L2 316 aa17.46■□□□□ 0.39
NME3-206ENST00000564252 CLN5O75503 358 aa17.45■□□□□ 0.38
NME3-206ENST00000564252 GABARAPO95166 117 aa17.45■□□□□ 0.38
NME3-206ENST00000564252 ZNF182P17025 639 aaPredicted RBP17.45■□□□□ 0.38
NME3-206ENST00000564252 RPL11P62913 178 aaKnown RBP17.45■□□□□ 0.38
NME3-206ENST00000564252 BSXQ3C1V8 233 aa17.45■□□□□ 0.38
NME3-206ENST00000564252 RPP25LQ8N5L8 163 aaKnown RBP17.45■□□□□ 0.38
NME3-206ENST00000564252 CCDC71LQ8N9Z2 235 aa17.45■□□□□ 0.38
NME3-206ENST00000564252 TMEM229BQ8NBD8 167 aa17.45■□□□□ 0.38
NME3-206ENST00000564252 NPPCP23582 126 aa17.44■□□□□ 0.38
NME3-206ENST00000564252 OPRK1P41145 380 aa17.44■□□□□ 0.38
NME3-206ENST00000564252 RPL5P46777 297 aaKnown RBP17.44■□□□□ 0.38
NME3-206ENST00000564252 MLANAQ16655 118 aa17.44■□□□□ 0.38
NME3-206ENST00000564252 LGALS9CQ6DKI2 356 aa17.44■□□□□ 0.38
NME3-206ENST00000564252 Q6ZRM9 215 aa17.44■□□□□ 0.38
NME3-206ENST00000564252 OR4X1Q8NH49 305 aa17.44■□□□□ 0.38
NME3-206ENST00000564252 C11orf45Q8TAV5 145 aa17.44■□□□□ 0.38
NME3-206ENST00000564252 RRNAD1Q96FB5 475 aaKnown RBP17.44■□□□□ 0.38
NME3-206ENST00000564252 MFFQ9GZY8 342 aa17.44■□□□□ 0.38
NME3-206ENST00000564252 ENY2Q9NPA8 101 aa17.44■□□□□ 0.38
NME3-206ENST00000564252 CRYBB3P26998 211 aa17.43■□□□□ 0.38
NME3-206ENST00000564252 TMEM187Q14656 261 aa17.43■□□□□ 0.38
NME3-206ENST00000564252 SCGB2B2Q4G0G5 96 aa17.43■□□□□ 0.38
NME3-206ENST00000564252 AARDQ4LEZ3 155 aa17.43■□□□□ 0.38
NME3-206ENST00000564252 MARCH1Q8TCQ1 289 aa17.43■□□□□ 0.38
NME3-206ENST00000564252 RABAC1Q9UI14 185 aa17.43■□□□□ 0.38
NME3-206ENST00000564252 DEDDO75618 318 aa17.42■□□□□ 0.38
NME3-206ENST00000564252 B3GALNT1O75752 331 aa17.42■□□□□ 0.38
NME3-206ENST00000564252 RAB3DO95716 219 aa17.42■□□□□ 0.38
NME3-206ENST00000564252 TAS2R19P59542 299 aa17.42■□□□□ 0.38
NME3-206ENST00000564252 RBMS2Q15434 407 aaKnown RBP17.42■□□□□ 0.38
NME3-206ENST00000564252 STEAP1BQ6NZ63 245 aa17.42■□□□□ 0.38
NME3-206ENST00000564252 RNASE11Q8TAA1 199 aaKnown RBP17.42■□□□□ 0.38
NME3-206ENST00000564252 C15orf40Q8WUR7 153 aa17.42■□□□□ 0.38
NME3-206ENST00000564252 METTL26Q96S19 204 aa17.42■□□□□ 0.38
NME3-206ENST00000564252 FBXL17Q9UF56 701 aa17.42■□□□□ 0.38
NME3-206ENST00000564252 HECTD4Q9Y4D8 3996 aa17.41■□□□□ 0.38
NME3-206ENST00000564252 A0A1W2PS18 150 aa17.41■□□□□ 0.38
NME3-206ENST00000564252 K7EQG2 157 aa17.41■□□□□ 0.38
NME3-206ENST00000564252 DEFB4AO15263 64 aa17.41■□□□□ 0.38
NME3-206ENST00000564252 IGKV1-17P01599 117 aa17.41■□□□□ 0.38
NME3-206ENST00000564252 SMIM18P0DKX4 95 aa17.41■□□□□ 0.38
NME3-206ENST00000564252 STHQ8IWL8 128 aa17.41■□□□□ 0.38
NME3-206ENST00000564252 TMEM222Q9H0R3 208 aa17.41■□□□□ 0.38
NME3-206ENST00000564252 MIXL1Q9H2W2 232 aa17.41■□□□□ 0.38
NME3-206ENST00000564252 CDS2O95674 445 aa17.4■□□□□ 0.38
NME3-206ENST00000564252 P2RY1P47900 373 aa17.4■□□□□ 0.38
NME3-206ENST00000564252 SPCS3P61009 180 aa17.4■□□□□ 0.38
NME3-206ENST00000564252 TIGITQ495A1 244 aa17.4■□□□□ 0.38
NME3-206ENST00000564252 FAM219AQ8IW50 185 aa17.4■□□□□ 0.38
NME3-206ENST00000564252 STXBP6Q8NFX7 210 aa17.4■□□□□ 0.38
NME3-206ENST00000564252 LHFPL5Q8TAF8 219 aa17.4■□□□□ 0.38
NME3-206ENST00000564252 GABARAPH6UMI1 98 aa17.39■□□□□ 0.37
NME3-206ENST00000564252 SCGB2A1O75556 95 aa17.39■□□□□ 0.37
NME3-206ENST00000564252 IFNA4P05014 189 aa17.39■□□□□ 0.37
NME3-206ENST00000564252 GIG44P09565 113 aaPredicted RBP17.39■□□□□ 0.37
NME3-206ENST00000564252 OR5AC1P0C628 307 aa17.39■□□□□ 0.37
NME3-206ENST00000564252 GPR107Q5VW38 600 aa17.39■□□□□ 0.37
NME3-206ENST00000564252 FAAP20Q6NZ36 180 aa17.39■□□□□ 0.37
NME3-206ENST00000564252 TRPT1Q86TN4 253 aaKnown RBP17.39■□□□□ 0.37
NME3-206ENST00000564252 OR52E5Q8NH55 327 aa17.39■□□□□ 0.37
NME3-206ENST00000564252 GLYATL2Q8WU03 294 aa17.39■□□□□ 0.37
NME3-206ENST00000564252 TMEM230Q96A57 120 aa17.39■□□□□ 0.37
NME3-206ENST00000564252 GRAMD2BQ96HH9 432 aa17.39■□□□□ 0.37
NME3-206ENST00000564252 RTBDNQ9BSG5 229 aaPredicted RBP17.39■□□□□ 0.37
NME3-206ENST00000564252 AGRNO00468 2067 aa17.39■□□□□ 0.37
NME3-206ENST00000564252 HTR2BP41595 481 aa17.38■□□□□ 0.37
NME3-206ENST00000564252 SSBP1Q04837 148 aaKnown RBP17.38■□□□□ 0.37
NME3-206ENST00000564252 Q8NAQ8 132 aa17.38■□□□□ 0.37
NME3-206ENST00000564252 DCANP1Q8TF63 244 aa17.38■□□□□ 0.37
NME3-206ENST00000564252 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.38■□□□□ 0.37
NME3-206ENST00000564252 TRAV30A0A087WSZ9 112 aa17.37■□□□□ 0.37
NME3-206ENST00000564252 TEX13DA0A0J9YY54 714 aaPredicted RBP17.37■□□□□ 0.37
NME3-206ENST00000564252 SELENOHQ8IZQ5 122 aaKnown RBP17.37■□□□□ 0.37
NME3-206ENST00000564252 RBPMSQ93062 196 aaKnown RBP17.37■□□□□ 0.37
NME3-206ENST00000564252 NAA60Q9H7X0 242 aa17.37■□□□□ 0.37
NME3-206ENST00000564252 C14orf166Q9Y224 244 aaKnown RBP17.37■□□□□ 0.37
NME3-206ENST00000564252 U3KQE9 123 aa17.37■□□□□ 0.37
NME3-206ENST00000564252 RPS10-NUDT3A0A1W2PQS6 291 aa17.36■□□□□ 0.37
NME3-206ENST00000564252 ZNF688P0C7X2 276 aa17.36■□□□□ 0.37
NME3-206ENST00000564252 IGLC1P0CG04 106 aa17.36■□□□□ 0.37
NME3-206ENST00000564252 MRPS10P82664 201 aaKnown RBP17.36■□□□□ 0.37
NME3-206ENST00000564252 MEF2DQ14814 521 aa17.36■□□□□ 0.37
NME3-206ENST00000564252 C2orf83Q53S99 150 aa17.36■□□□□ 0.37
NME3-206ENST00000564252 C2CD4CQ8TF44 421 aa17.36■□□□□ 0.37
NME3-206ENST00000564252 GPR146Q96CH1 333 aa17.36■□□□□ 0.37
NME3-206ENST00000564252 NARS2Q96I59 477 aaKnown RBP17.36■□□□□ 0.37
NME3-206ENST00000564252 HEYLQ9NQ87 328 aaPredicted RBP17.36■□□□□ 0.37
NME3-206ENST00000564252 CACNG5Q9UF02 275 aa17.36■□□□□ 0.37
NME3-206ENST00000564252 KNCNA6PVL3 124 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms