RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 TMEM144Q7Z5S9 345 aa7.72□□□□□ -1.17
UBFD1-203ENST00000564106 DYNAPQ8N1N2 210 aa7.72□□□□□ -1.17
UBFD1-203ENST00000564106 FAM213BQ8TBF2 198 aa7.72□□□□□ -1.17
UBFD1-203ENST00000564106 ABHD5Q8WTS1 349 aa7.72□□□□□ -1.17
UBFD1-203ENST00000564106 TMEM170AQ8WVE7 144 aa7.72□□□□□ -1.17
UBFD1-203ENST00000564106 RASL11BQ9BPW5 248 aa7.72□□□□□ -1.17
UBFD1-203ENST00000564106 ZNF747Q9BV97 191 aa7.72□□□□□ -1.17
UBFD1-203ENST00000564106 PBDC1Q9BVG4 233 aa7.72□□□□□ -1.17
UBFD1-203ENST00000564106 F11RQ9Y624 299 aaKnown RBP7.72□□□□□ -1.17
UBFD1-203ENST00000564106 KRBOX1C9JBD0 128 aa7.71□□□□□ -1.18
UBFD1-203ENST00000564106 M0QZK8 103 aa7.71□□□□□ -1.18
UBFD1-203ENST00000564106 OPRK1P41145 380 aa7.71□□□□□ -1.18
UBFD1-203ENST00000564106 FXYD3Q14802 87 aa7.71□□□□□ -1.18
UBFD1-203ENST00000564106 ACOT6Q3I5F7 207 aaPredicted RBP7.71□□□□□ -1.18
UBFD1-203ENST00000564106 PVRIGQ6DKI7 326 aa7.71□□□□□ -1.18
UBFD1-203ENST00000564106 HIST2H2BDQ6DRA6 164 aa7.71□□□□□ -1.18
UBFD1-203ENST00000564106 SLC16A13Q7RTY0 426 aa7.71□□□□□ -1.18
UBFD1-203ENST00000564106 C16orf82Q7Z2V1 217 aa7.71□□□□□ -1.18
UBFD1-203ENST00000564106 SSMEM1Q8WWF3 244 aa7.71□□□□□ -1.18
UBFD1-203ENST00000564106 ARPC1AQ92747 370 aa7.71□□□□□ -1.18
UBFD1-203ENST00000564106 RBMXL1Q96E39 390 aaKnown RBP7.71□□□□□ -1.18
UBFD1-203ENST00000564106 AJUBAQ96IF1 538 aa7.71□□□□□ -1.18
UBFD1-203ENST00000564106 TMEM68Q96MH6 324 aa7.71□□□□□ -1.18
UBFD1-203ENST00000564106 P2RX4Q99571 388 aa7.71□□□□□ -1.18
UBFD1-203ENST00000564106 HRH4Q9H3N8 390 aa7.71□□□□□ -1.18
UBFD1-203ENST00000564106 SMDT1Q9H4I9 107 aa7.71□□□□□ -1.18
UBFD1-203ENST00000564106 MOB4Q9Y3A3 225 aa7.71□□□□□ -1.18
UBFD1-203ENST00000564106 TRAV1-1A0A0B4J248 108 aa7.7□□□□□ -1.18
UBFD1-203ENST00000564106 TEX22C9J3V5 150 aa7.7□□□□□ -1.18
UBFD1-203ENST00000564106 E7EUB6 86 aa7.7□□□□□ -1.18
UBFD1-203ENST00000564106 I3L521 148 aa7.7□□□□□ -1.18
UBFD1-203ENST00000564106 SCGB2A1O75556 95 aa7.7□□□□□ -1.18
UBFD1-203ENST00000564106 DEFA4P12838 97 aa7.7□□□□□ -1.18
UBFD1-203ENST00000564106 M6PRP20645 277 aa7.7□□□□□ -1.18
UBFD1-203ENST00000564106 CD24P25063 80 aa7.7□□□□□ -1.18
UBFD1-203ENST00000564106 RPL29P47914 159 aaKnown RBP7.7□□□□□ -1.18
UBFD1-203ENST00000564106 SELENOTP62341 195 aa7.7□□□□□ -1.18
UBFD1-203ENST00000564106 ARSJQ5FYB0 599 aaPredicted RBP7.7□□□□□ -1.18
UBFD1-203ENST00000564106 FFAR4Q5NUL3 377 aa7.7□□□□□ -1.18
UBFD1-203ENST00000564106 C17orf50Q8WW18 174 aa7.7□□□□□ -1.18
UBFD1-203ENST00000564106 RBM14Q96PK6 669 aaKnown RBP7.7□□□□□ -1.18
UBFD1-203ENST00000564106 JMJD8Q96S16 334 aa7.7□□□□□ -1.18
UBFD1-203ENST00000564106 ACTR3CQ9C0K3 210 aaPredicted RBP7.7□□□□□ -1.18
UBFD1-203ENST00000564106 PRDM13Q9H4Q3 707 aa7.7□□□□□ -1.18
UBFD1-203ENST00000564106 THYN1Q9P016 225 aa7.7□□□□□ -1.18
UBFD1-203ENST00000564106 LSM4Q9Y4Z0 139 aaKnown RBP7.7□□□□□ -1.18
UBFD1-203ENST00000564106 A0A0U1RQK1 487 aa7.69□□□□□ -1.18
UBFD1-203ENST00000564106 CTXND1A0A1B0GTU2 59 aa7.69□□□□□ -1.18
UBFD1-203ENST00000564106 A0A1B0GW64 132 aa7.69□□□□□ -1.18
UBFD1-203ENST00000564106 FAM181BA6NEQ2 426 aa7.69□□□□□ -1.18
UBFD1-203ENST00000564106 NPIPB5A8MRT5 1133 aa7.69□□□□□ -1.18
UBFD1-203ENST00000564106 CLDN34H7C241 214 aa7.69□□□□□ -1.18
UBFD1-203ENST00000564106 FCN1O00602 326 aa7.69□□□□□ -1.18
UBFD1-203ENST00000564106 AGPAT2O15120 278 aa7.69□□□□□ -1.18
UBFD1-203ENST00000564106 IFNA1P01562 189 aa7.69□□□□□ -1.18
UBFD1-203ENST00000564106 CTRB1P17538 263 aa7.69□□□□□ -1.18
UBFD1-203ENST00000564106 TAGLN2P37802 199 aaKnown RBP7.69□□□□□ -1.18
UBFD1-203ENST00000564106 ELLP55199 621 aaPredicted RBP7.69□□□□□ -1.18
UBFD1-203ENST00000564106 CX3CL1P78423 397 aa7.69□□□□□ -1.18
UBFD1-203ENST00000564106 SCGB2A2Q13296 93 aa7.69□□□□□ -1.18
UBFD1-203ENST00000564106 PRR31Q5SQ13 230 aa7.69□□□□□ -1.18
UBFD1-203ENST00000564106 CTRB2Q6GPI1 263 aa7.69□□□□□ -1.18
UBFD1-203ENST00000564106 Q8N9W7 124 aa7.69□□□□□ -1.18
UBFD1-203ENST00000564106 FAM210AQ96ND0 272 aa7.69□□□□□ -1.18
UBFD1-203ENST00000564106 SSX3Q99909 188 aa7.69□□□□□ -1.18
UBFD1-203ENST00000564106 SLC25A33Q9BSK2 321 aa7.69□□□□□ -1.18
UBFD1-203ENST00000564106 GGTLC1Q9BX51 225 aa7.69□□□□□ -1.18
UBFD1-203ENST00000564106 RPRMQ9NS64 109 aa7.69□□□□□ -1.18
UBFD1-203ENST00000564106 A0A1W2PPV4 95 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 MT-CO2P00403 227 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 IGHV4-59P01825 116 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 REG1AP05451 166 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 FABP1P07148 127 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 CRYGCP07315 174 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 AREGP15514 252 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 HIST1H1BP16401 226 aaKnown RBP7.68□□□□□ -1.18
UBFD1-203ENST00000564106 ZP3P21754 424 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 PAX6P26367 422 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 FHITP49789 147 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 SSBP2P81877 361 aaPredicted RBP7.68□□□□□ -1.18
UBFD1-203ENST00000564106 GAMTQ14353 236 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 PEA15Q15121 130 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 TOR2AQ5JU69 321 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 Q6YL49 198 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 C5orf56Q8N8D9 126 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 OR10G4Q8NGN3 311 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 OR10G9Q8NGN4 311 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 OR10G7Q8NGN6 311 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 OR5R1Q8NH85 324 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 SFT2D1Q8WV19 159 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 MBD3L1Q8WWY6 194 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 MISP3Q96FF7 219 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 RCC1LQ96I51 464 aaKnown RBP7.68□□□□□ -1.18
UBFD1-203ENST00000564106 RNF2Q99496 336 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 MGST2Q99735 147 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 SLC39A9Q9NUM3 307 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 PLA2G2EQ9NZK7 142 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 PXMP4Q9Y6I8 212 aa7.68□□□□□ -1.18
UBFD1-203ENST00000564106 IGHV7-81A0A0B4J1V7 117 aa7.67□□□□□ -1.18
UBFD1-203ENST00000564106 ANKRD34BA5PLL1 514 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms