RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 TRAV9-1A0A075B6T8 112 aa0.31□□□□□ -2.36
CHD9-207ENST00000562806 TRAV1-1A0A0B4J248 108 aa0.31□□□□□ -2.36
CHD9-207ENST00000562806 TNNC2P02585 160 aa0.31□□□□□ -2.36
CHD9-207ENST00000562806 HIST1H1EP10412 219 aaKnown RBP0.31□□□□□ -2.36
CHD9-207ENST00000562806 HIST1H1TP22492 207 aaPredicted RBP0.31□□□□□ -2.36
CHD9-207ENST00000562806 SULT1A1P50225 295 aa0.31□□□□□ -2.36
CHD9-207ENST00000562806 SNRPD2P62316 118 aaKnown RBP0.31□□□□□ -2.36
CHD9-207ENST00000562806 OR2F1Q13607 317 aa0.31□□□□□ -2.36
CHD9-207ENST00000562806 COTL1Q14019 142 aa0.31□□□□□ -2.36
CHD9-207ENST00000562806 MPV17LQ2QL34 196 aa0.31□□□□□ -2.36
CHD9-207ENST00000562806 CDKL4Q5MAI5 379 aa0.31□□□□□ -2.36
CHD9-207ENST00000562806 HIST3H2BBQ8N257 126 aa0.31□□□□□ -2.36
CHD9-207ENST00000562806 TMEM86BQ8N661 226 aa0.31□□□□□ -2.36
CHD9-207ENST00000562806 Q8N6K4 173 aa0.31□□□□□ -2.36
CHD9-207ENST00000562806 SIGLECL1Q8N7X8 197 aa0.31□□□□□ -2.36
CHD9-207ENST00000562806 H1FXQ92522 213 aaKnown RBP0.31□□□□□ -2.36
CHD9-207ENST00000562806 TMEM147Q9BVK8 224 aa0.31□□□□□ -2.36
CHD9-207ENST00000562806 SLC39A9Q9NUM3 307 aa0.31□□□□□ -2.36
CHD9-207ENST00000562806 GUCA1BQ9UMX6 200 aa0.31□□□□□ -2.36
CHD9-207ENST00000562806 ERGIC3Q9Y282 383 aa0.31□□□□□ -2.36
CHD9-207ENST00000562806 NUP155O75694 1391 aa0.31□□□□□ -2.36
CHD9-207ENST00000562806 HEATR5AQ86XA9 2040 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 TRBV6-8A0A0A6YYG3 113 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 TRAV12-1A0A0B4J245 112 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 EXOC1LA0A1B0GW35 172 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 PQLC2LA1A4F0 135 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 M0R036 132 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 FAAHO00519 579 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 IFNA5P01569 189 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 S100A4P26447 101 aaKnown RBP0.3□□□□□ -2.36
CHD9-207ENST00000562806 SSR2P43308 183 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 RPL5P46777 297 aaKnown RBP0.3□□□□□ -2.36
CHD9-207ENST00000562806 NKX2-5P52952 324 aaPredicted RBP0.3□□□□□ -2.36
CHD9-207ENST00000562806 CDC42P60953 191 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 CNBPP62633 177 aaKnown RBP0.3□□□□□ -2.36
CHD9-207ENST00000562806 ACOT6Q3I5F7 207 aaPredicted RBP0.3□□□□□ -2.36
CHD9-207ENST00000562806 RNASE10Q5GAN6 216 aaKnown RBP0.3□□□□□ -2.36
CHD9-207ENST00000562806 SPOPLQ6IQ16 392 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 C8orf74Q6P047 294 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 SOSTDC1Q6X4U4 206 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 TRAPPC6BQ86SZ2 158 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 ANKRD29Q8N6D5 301 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 TEX47Q8TBZ9 253 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 BORCS5Q969J3 196 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 TSPAN32Q96QS1 320 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 C20orf27Q9GZN8 174 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 C11orf68Q9H3H3 251 aaKnown RBP0.3□□□□□ -2.36
CHD9-207ENST00000562806 HECW2Q9P2P5 1572 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 RALGAPA2Q2PPJ7 1873 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 MTUS2Q5JR59 1369 aa0.3□□□□□ -2.36
CHD9-207ENST00000562806 SNAPC4Q5SXM2 1469 aa0.29□□□□□ -2.36
CHD9-207ENST00000562806 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.29□□□□□ -2.36
CHD9-207ENST00000562806 SMIM23A6NLE4 172 aa0.29□□□□□ -2.36
CHD9-207ENST00000562806 BUB1B-PAK6H3BSN5 160 aa0.29□□□□□ -2.36
CHD9-207ENST00000562806 NCR3O14931 201 aa0.29□□□□□ -2.36
CHD9-207ENST00000562806 SULT1B1O43704 296 aa0.29□□□□□ -2.36
CHD9-207ENST00000562806 LYZL6O75951 148 aa0.29□□□□□ -2.36
CHD9-207ENST00000562806 CRYZL1O95825 349 aa0.29□□□□□ -2.36
CHD9-207ENST00000562806 IFNA16P05015 189 aa0.29□□□□□ -2.36
CHD9-207ENST00000562806 MGST1P10620 155 aaKnown RBP0.29□□□□□ -2.36
CHD9-207ENST00000562806 YPEL3P61236 119 aaPredicted RBP0.29□□□□□ -2.36
CHD9-207ENST00000562806 OR13D1Q8NGV5 346 aa0.29□□□□□ -2.36
CHD9-207ENST00000562806 OR10J5Q8NHC4 309 aa0.29□□□□□ -2.36
CHD9-207ENST00000562806 PATE1Q8WXA2 126 aa0.29□□□□□ -2.36
CHD9-207ENST00000562806 GPR146Q96CH1 333 aa0.29□□□□□ -2.36
CHD9-207ENST00000562806 DCUN1D1Q96GG9 259 aa0.29□□□□□ -2.36
CHD9-207ENST00000562806 PPP1R2P1Q96PQ5 205 aa0.29□□□□□ -2.36
CHD9-207ENST00000562806 OSTCQ9NRP0 149 aa0.29□□□□□ -2.36
CHD9-207ENST00000562806 MRPL27Q9P0M9 148 aaKnown RBP0.29□□□□□ -2.36
CHD9-207ENST00000562806 VPS29Q9UBQ0 182 aa0.29□□□□□ -2.36
CHD9-207ENST00000562806 PKIGQ9Y2B9 76 aa0.29□□□□□ -2.36
CHD9-207ENST00000562806 SLC35A3Q9Y2D2 325 aa0.29□□□□□ -2.36
CHD9-207ENST00000562806 MUC5ACP98088 5654 aa0.29□□□□□ -2.36
CHD9-207ENST00000562806 WRNQ14191 1432 aaPredicted RBP eCLIP0.29□□□□□ -2.36
CHD9-207ENST00000562806 CCDC88AQ3V6T2 1871 aa0.29□□□□□ -2.36
CHD9-207ENST00000562806 PEAK1Q9H792 1746 aa0.28□□□□□ -2.36
CHD9-207ENST00000562806 TGIF2-C20orf24A0A0A6YYL0 155 aa0.28□□□□□ -2.36
CHD9-207ENST00000562806 TRAV26-2A0A0B4J265 109 aa0.28□□□□□ -2.36
CHD9-207ENST00000562806 C7orf71A4D174 169 aa0.28□□□□□ -2.36
CHD9-207ENST00000562806 OR4C46A6NHA9 309 aa0.28□□□□□ -2.36
CHD9-207ENST00000562806 PHGR1C9JFL3 82 aa0.28□□□□□ -2.36
CHD9-207ENST00000562806 PIRO00625 290 aa0.28□□□□□ -2.36
CHD9-207ENST00000562806 CHP2O43745 196 aa0.28□□□□□ -2.36
CHD9-207ENST00000562806 OR2J2O76002 312 aa0.28□□□□□ -2.36
CHD9-207ENST00000562806 AHSA1O95433 338 aa0.28□□□□□ -2.36
CHD9-207ENST00000562806 TTRP02766 147 aa0.28□□□□□ -2.36
CHD9-207ENST00000562806 RBP1P09455 135 aa0.28□□□□□ -2.36
CHD9-207ENST00000562806 SMIM10L2AP0DMW4 78 aa0.28□□□□□ -2.36
CHD9-207ENST00000562806 SMIM10L2BP0DMW5 78 aa0.28□□□□□ -2.36
CHD9-207ENST00000562806 RPS20P60866 119 aaKnown RBP0.28□□□□□ -2.36
CHD9-207ENST00000562806 C1orf137Q5JT78 98 aa0.28□□□□□ -2.36
CHD9-207ENST00000562806 C3orf56Q8N813 242 aa0.28□□□□□ -2.36
CHD9-207ENST00000562806 DDI1Q8WTU0 396 aa0.28□□□□□ -2.36
CHD9-207ENST00000562806 DCSTAMPQ9H295 470 aa0.28□□□□□ -2.36
CHD9-207ENST00000562806 EPDR1Q9UM22 224 aa0.28□□□□□ -2.36
CHD9-207ENST00000562806 KMT2DO14686 5537 aa0.28□□□□□ -2.37
CHD9-207ENST00000562806 SYNE2Q8WXH0 6885 aaKnown RBP0.27□□□□□ -2.37
CHD9-207ENST00000562806 CCDC160A6NGH7 325 aa0.27□□□□□ -2.37
CHD9-207ENST00000562806 ZNF736B4DX44 427 aaPredicted RBP0.27□□□□□ -2.37
CHD9-207ENST00000562806 SERPINA6P08185 405 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms