RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.25□□□□□ -1.41
TCF4-216ENST00000562680 RNASEH2CQ8TDP1 164 aaKnown RBP6.25□□□□□ -1.41
TCF4-216ENST00000562680 HIST1H2BHQ93079 126 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 HIST1H2BNQ99877 126 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 HIST1H2BMQ99879 126 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 PXMP4Q9Y6I8 212 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 IGKV1D-17A0A075B6S4 117 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 F8VVB4 439 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 F8VWA3 439 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 UPK2O00526 184 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 ORM2P19652 201 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 AZU1P20160 251 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 LCN2P80188 198 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 RPEL1Q2QD12 228 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 GBGT1Q8N5D6 347 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 OR4C12Q96R67 309 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 P2RX4Q99571 388 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 HIGD1AQ9Y241 93 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 TEX50A0A1B0GTY4 177 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 FXYD3Q14802 87 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 TEX36Q5VZQ5 186 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 ZCCHC24Q8N2G6 241 aaKnown RBP6.25□□□□□ -1.41
TCF4-216ENST00000562680 COQ2Q96H96 371 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 ZNF503-AS2A6NEH8 195 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 K7EM74 188 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 CA1P00915 261 aaPredicted RBP6.25□□□□□ -1.41
TCF4-216ENST00000562680 ABCA4P78363 2273 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 TP53BP1Q12888 1972 aaPredicted RBP6.25□□□□□ -1.41
TCF4-216ENST00000562680 OR1B1Q8NGR6 318 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 MRPL32Q9BYC8 188 aaKnown RBP6.25□□□□□ -1.41
TCF4-216ENST00000562680 TMEM191AQ9H0A3 160 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 C7orf69Q9H7B7 122 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 MRPL16Q9NX20 251 aaKnown RBP6.25□□□□□ -1.41
TCF4-216ENST00000562680 CADP27708 2225 aa6.25□□□□□ -1.41
TCF4-216ENST00000562680 A0A1W2PS18 150 aa6.24□□□□□ -1.41
TCF4-216ENST00000562680 SLC25A5P05141 298 aaKnown RBP6.24□□□□□ -1.41
TCF4-216ENST00000562680 IGHV1-8P0DP01 117 aa6.24□□□□□ -1.41
TCF4-216ENST00000562680 ID3Q02535 119 aa6.24□□□□□ -1.41
TCF4-216ENST00000562680 GATAD1Q8WUU5 269 aa6.24□□□□□ -1.41
TCF4-216ENST00000562680 SSMEM1Q8WWF3 244 aa6.24□□□□□ -1.41
TCF4-216ENST00000562680 PARLQ9H300 379 aa6.24□□□□□ -1.41
TCF4-216ENST00000562680 ZNF257Q9Y2Q1 563 aa6.24□□□□□ -1.41
TCF4-216ENST00000562680 B4DSR2 109 aa6.24□□□□□ -1.41
TCF4-216ENST00000562680 GATA3P23771 443 aa6.24□□□□□ -1.41
TCF4-216ENST00000562680 Q6ZR03 302 aa6.24□□□□□ -1.41
TCF4-216ENST00000562680 WDR61Q9GZS3 305 aaKnown RBP6.24□□□□□ -1.41
TCF4-216ENST00000562680 C15orf61A6NNL5 157 aa6.24□□□□□ -1.41
TCF4-216ENST00000562680 RPL13AP40429 203 aaKnown RBP6.24□□□□□ -1.41
TCF4-216ENST00000562680 AMMECR1LQ6DCA0 310 aa6.24□□□□□ -1.41
TCF4-216ENST00000562680 TMEM190Q8WZ59 177 aa6.24□□□□□ -1.41
TCF4-216ENST00000562680 TNFRSF19Q9NS68 423 aa6.24□□□□□ -1.41
TCF4-216ENST00000562680 NBR2O15453 112 aa6.24□□□□□ -1.41
TCF4-216ENST00000562680 GZMBP10144 247 aa6.24□□□□□ -1.41
TCF4-216ENST00000562680 CLEC12BQ2HXU8 276 aa6.24□□□□□ -1.41
TCF4-216ENST00000562680 STPG3Q8N7X2 389 aa6.24□□□□□ -1.41
TCF4-216ENST00000562680 A0A087WWC5 75 aa6.24□□□□□ -1.41
TCF4-216ENST00000562680 KAAG1Q9UBP8 84 aa6.24□□□□□ -1.41
TCF4-216ENST00000562680 LOC102723971A0A1B0GUV8 181 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 BMPR1BO00238 502 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 LINC00869P0C866 280 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 RND2P52198 227 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 PSG5Q15238 335 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 SLC25A34Q6PIV7 304 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 SGK494Q96LW2 274 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 HIST1H1EP10412 219 aaKnown RBP6.23□□□□□ -1.41
TCF4-216ENST00000562680 TMEM200BQ69YZ2 307 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 ZNF880Q6PDB4 577 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 GPHA2Q96T91 129 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 PMCHL2Q9BQD1 86 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 IFI27L2Q9H2X8 130 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 SRD5A3Q9H8P0 318 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 DOCK10Q96BY6 2186 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 POLEQ07864 2286 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 GUSBP1Q15486 140 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 SLC25A48Q6ZT89 311 aaKnown RBP6.23□□□□□ -1.41
TCF4-216ENST00000562680 IGHV2-26A0A0B4J1V2 119 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 C11orf94C9JXX5 98 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 BCL2P10415 239 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 PRTN3P24158 256 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 LY6G6FQ5SQ64 297 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 C16orf82Q7Z2V1 217 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 EEF1AKMT3Q96AZ1 226 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 JMJD8Q96S16 334 aa6.23□□□□□ -1.41
TCF4-216ENST00000562680 A0A0G2JLM5 398 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 TRBV7-9A0A0J9YWB2 115 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 LYNX1G3V0Z9 82 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 CCL25O15444 150 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 IGKV1D-33P01593 117 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 IGKV1-33P01594 117 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 LYNX1P0DP58 116 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 RNASEKQ6P5S7 137 aaKnown RBP6.22□□□□□ -1.41
TCF4-216ENST00000562680 RNF144BQ7Z419 303 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 LINC01551Q86U37 167 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 PRORYQ9H606 182 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 SPCS1Q9Y6A9 102 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 J3QKU1 62 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 AMBPP02760 352 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 SAA1P0DJI8 122 aaPredicted RBP6.22□□□□□ -1.41
TCF4-216ENST00000562680 PRCDQ00LT1 54 aa6.22□□□□□ -1.41
TCF4-216ENST00000562680 Q8NA96 180 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms