RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 OR8U8P0C7N1 319 aa7.47□□□□□ -1.21
CLK3-208ENST00000562626 CD33P20138 364 aa7.47□□□□□ -1.21
CLK3-208ENST00000562626 SYNJ2BPP57105 145 aa7.47□□□□□ -1.21
CLK3-208ENST00000562626 RAB32Q13637 225 aa7.47□□□□□ -1.21
CLK3-208ENST00000562626 KLF5Q13887 457 aaPredicted RBP7.47□□□□□ -1.21
CLK3-208ENST00000562626 FCN2Q15485 313 aa7.47□□□□□ -1.21
CLK3-208ENST00000562626 PRSS54Q6PEW0 395 aa7.47□□□□□ -1.21
CLK3-208ENST00000562626 UNQ9165/PRO28630Q6UXU0 137 aa7.47□□□□□ -1.21
CLK3-208ENST00000562626 ADAMTSL5Q6ZMM2 481 aa7.47□□□□□ -1.21
CLK3-208ENST00000562626 UBAC2Q8NBM4 344 aa7.47□□□□□ -1.21
CLK3-208ENST00000562626 OR11H7Q8NGC8 314 aa7.47□□□□□ -1.21
CLK3-208ENST00000562626 CXorf58Q96LI9 332 aa7.47□□□□□ -1.21
CLK3-208ENST00000562626 KRTAP17-1Q9BYP8 105 aa7.47□□□□□ -1.21
CLK3-208ENST00000562626 HIPK2Q9H2X6 1198 aa7.47□□□□□ -1.21
CLK3-208ENST00000562626 THYN1Q9P016 225 aa7.47□□□□□ -1.21
CLK3-208ENST00000562626 MGAT4CQ9UBM8 478 aa7.47□□□□□ -1.21
CLK3-208ENST00000562626 LSM5Q9Y4Y9 91 aaKnown RBP7.47□□□□□ -1.21
CLK3-208ENST00000562626 OVOL1O14753 267 aa7.46□□□□□ -1.22
CLK3-208ENST00000562626 TGOLN2O43493 480 aa7.46□□□□□ -1.22
CLK3-208ENST00000562626 SSNA1O43805 119 aa7.46□□□□□ -1.22
CLK3-208ENST00000562626 MED6O75586 246 aa7.46□□□□□ -1.22
CLK3-208ENST00000562626 OPRK1P41145 380 aa7.46□□□□□ -1.22
CLK3-208ENST00000562626 SUB1P53999 127 aaKnown RBP eCLIP7.46□□□□□ -1.22
CLK3-208ENST00000562626 CD69Q07108 199 aa7.46□□□□□ -1.22
CLK3-208ENST00000562626 ARL16Q0P5N6 197 aa7.46□□□□□ -1.22
CLK3-208ENST00000562626 Q56UQ5 140 aa7.46□□□□□ -1.22
CLK3-208ENST00000562626 SPANXN5Q5MJ07 72 aa7.46□□□□□ -1.22
CLK3-208ENST00000562626 SAMD5Q5TGI4 173 aa7.46□□□□□ -1.22
CLK3-208ENST00000562626 ACSM6Q6P461 480 aa7.46□□□□□ -1.22
CLK3-208ENST00000562626 OR1L6Q8NGR2 347 aa7.46□□□□□ -1.22
CLK3-208ENST00000562626 CACNG8Q8WXS5 425 aa7.46□□□□□ -1.22
CLK3-208ENST00000562626 RCC1LQ96I51 464 aaKnown RBP7.46□□□□□ -1.22
CLK3-208ENST00000562626 SMIM8Q96KF7 97 aa7.46□□□□□ -1.22
CLK3-208ENST00000562626 PSENENQ9NZ42 101 aa7.46□□□□□ -1.22
CLK3-208ENST00000562626 OR5AC2Q9NZP5 309 aa7.46□□□□□ -1.22
CLK3-208ENST00000562626 U3KQ87 197 aa7.46□□□□□ -1.22
CLK3-208ENST00000562626 IGKV1D-37A0A075B6S9 117 aa7.45□□□□□ -1.22
CLK3-208ENST00000562626 GGCTO75223 188 aaKnown RBP7.45□□□□□ -1.22
CLK3-208ENST00000562626 ZP3P21754 424 aa7.45□□□□□ -1.22
CLK3-208ENST00000562626 FCGR2BP31994 310 aaPredicted RBP7.45□□□□□ -1.22
CLK3-208ENST00000562626 RND2P52198 227 aa7.45□□□□□ -1.22
CLK3-208ENST00000562626 MFAP4P55083 255 aa7.45□□□□□ -1.22
CLK3-208ENST00000562626 KRTAP10-11P60412 298 aa7.45□□□□□ -1.22
CLK3-208ENST00000562626 S100A10P60903 97 aa7.45□□□□□ -1.22
CLK3-208ENST00000562626 RPEL1Q2QD12 228 aa7.45□□□□□ -1.22
CLK3-208ENST00000562626 TIGITQ495A1 244 aa7.45□□□□□ -1.22
CLK3-208ENST00000562626 LRRC37A5PQ49AS3 106 aa7.45□□□□□ -1.22
CLK3-208ENST00000562626 TMEM14EPQ6UXP3 125 aa7.45□□□□□ -1.22
CLK3-208ENST00000562626 SLC16A13Q7RTY0 426 aa7.45□□□□□ -1.22
CLK3-208ENST00000562626 RNASEH2CQ8TDP1 164 aaKnown RBP7.45□□□□□ -1.22
CLK3-208ENST00000562626 ZNF436Q9C0F3 470 aaPredicted RBP7.45□□□□□ -1.22
CLK3-208ENST00000562626 PAIP2BQ9ULR5 123 aaKnown RBP7.45□□□□□ -1.22
CLK3-208ENST00000562626 IGKV1OR2-108A0A075B7D4 117 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 IGSF23A1L1A6 192 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 TMEM213A2RRL7 107 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 FAM24AA6NFZ4 105 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 SEC14L6B5MCN3 397 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 CORTO00230 105 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 CYB5BO43169 146 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 ZNF207O43670 478 aaKnown RBP7.44□□□□□ -1.22
CLK3-208ENST00000562626 CLN5O75503 358 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 IGKV1-17P01599 117 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 PRB2P02812 416 aaPredicted RBP7.44□□□□□ -1.22
CLK3-208ENST00000562626 IFNA4P05014 189 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 CSN3P07498 182 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 METTL15P1P0C7V9 234 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 GAMTQ14353 236 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 BEAN1Q3B7T3 259 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 TM4SF20Q53R12 229 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 Q5BKY6 102 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 GPHB5Q86YW7 130 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 OR4X1Q8NH49 305 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 NPIPB3Q92617 1050 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 BSCL2Q96G97 398 aaPredicted RBP7.44□□□□□ -1.22
CLK3-208ENST00000562626 ACY3Q96HD9 319 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 RAB40CQ96S21 281 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 NMES1Q9C002 83 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 ZFAND3Q9H8U3 227 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 CACFD1Q9UGQ2 172 aa7.44□□□□□ -1.22
CLK3-208ENST00000562626 TRAV14DV4A0A0A6YYC5 116 aa7.43□□□□□ -1.22
CLK3-208ENST00000562626 GNG7O60262 68 aa7.43□□□□□ -1.22
CLK3-208ENST00000562626 TSC22D2O75157 780 aa7.43□□□□□ -1.22
CLK3-208ENST00000562626 IGLC1P0CG04 106 aa7.43□□□□□ -1.22
CLK3-208ENST00000562626 RRAS2P62070 204 aaPredicted RBP7.43□□□□□ -1.22
CLK3-208ENST00000562626 FAM209BQ5JX69 171 aa7.43□□□□□ -1.22
CLK3-208ENST00000562626 OR8G2PQ6IF36 304 aa7.43□□□□□ -1.22
CLK3-208ENST00000562626 ACOT7LQ6ZUV0 252 aa7.43□□□□□ -1.22
CLK3-208ENST00000562626 REC114Q7Z4M0 266 aa7.43□□□□□ -1.22
CLK3-208ENST00000562626 OR9G4Q8NGQ1 327 aa7.43□□□□□ -1.22
CLK3-208ENST00000562626 CHAC2Q8WUX2 184 aa7.43□□□□□ -1.22
CLK3-208ENST00000562626 PPP1R1CQ8WVI7 109 aa7.43□□□□□ -1.22
CLK3-208ENST00000562626 TMEM190Q8WZ59 177 aa7.43□□□□□ -1.22
CLK3-208ENST00000562626 CIB3Q96Q77 187 aaPredicted RBP7.43□□□□□ -1.22
CLK3-208ENST00000562626 TXN2Q99757 166 aa7.43□□□□□ -1.22
CLK3-208ENST00000562626 RNF126Q9BV68 326 aa7.43□□□□□ -1.22
CLK3-208ENST00000562626 MED28Q9H204 178 aa7.43□□□□□ -1.22
CLK3-208ENST00000562626 STRAPQ9Y3F4 350 aaKnown RBP7.43□□□□□ -1.22
CLK3-208ENST00000562626 IGHV3-49A0A0A0MS15 119 aa7.42□□□□□ -1.22
CLK3-208ENST00000562626 ZNF320A2RRD8 509 aa7.42□□□□□ -1.22
CLK3-208ENST00000562626 IZUMO1RA6ND01 250 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms