RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 IL5P05113 134 aa12.71□□□□□ -0.37
CLK3-207ENST00000562389 NPBWR1P48145 328 aa12.71□□□□□ -0.37
CLK3-207ENST00000562389 ATP5IP56385 69 aaPredicted RBP12.71□□□□□ -0.37
CLK3-207ENST00000562389 UNQ9165/PRO28630Q6UXU0 137 aa12.71□□□□□ -0.37
CLK3-207ENST00000562389 OR4D5Q8NGN0 318 aa12.71□□□□□ -0.37
CLK3-207ENST00000562389 TMEM190Q8WZ59 177 aa12.71□□□□□ -0.37
CLK3-207ENST00000562389 CIB3Q96Q77 187 aaPredicted RBP12.71□□□□□ -0.37
CLK3-207ENST00000562389 PALMDQ9NP74 551 aa12.71□□□□□ -0.37
CLK3-207ENST00000562389 ZNF256Q9Y2P7 627 aaPredicted RBP12.71□□□□□ -0.37
CLK3-207ENST00000562389 MEGF8Q7Z7M0 2845 aa12.7□□□□□ -0.38
CLK3-207ENST00000562389 IGHV3-35A0A0C4DH35 117 aa12.7□□□□□ -0.38
CLK3-207ENST00000562389 ZNF320A2RRD8 509 aa12.7□□□□□ -0.38
CLK3-207ENST00000562389 TMEM213A2RRL7 107 aa12.7□□□□□ -0.38
CLK3-207ENST00000562389 C2orf70A6NJV1 201 aa12.7□□□□□ -0.38
CLK3-207ENST00000562389 SYNGR2O43760 224 aa12.7□□□□□ -0.38
CLK3-207ENST00000562389 ELLP55199 621 aaPredicted RBP12.7□□□□□ -0.38
CLK3-207ENST00000562389 ID3Q02535 119 aa12.7□□□□□ -0.38
CLK3-207ENST00000562389 RELQ04864 619 aaPredicted RBP12.7□□□□□ -0.38
CLK3-207ENST00000562389 ADAMTSL5Q6ZMM2 481 aa12.7□□□□□ -0.38
CLK3-207ENST00000562389 HAPLN4Q86UW8 402 aa12.7□□□□□ -0.38
CLK3-207ENST00000562389 C12orf45Q8N5I9 185 aaPredicted RBP12.7□□□□□ -0.38
CLK3-207ENST00000562389 OR4X1Q8NH49 305 aa12.7□□□□□ -0.38
CLK3-207ENST00000562389 UFC1Q9Y3C8 167 aa12.7□□□□□ -0.38
CLK3-207ENST00000562389 WI2-2373I1.2A0A1W2PRP0 233 aa12.69□□□□□ -0.38
CLK3-207ENST00000562389 K7EIL1 84 aa12.69□□□□□ -0.38
CLK3-207ENST00000562389 LY86O95711 162 aa12.69□□□□□ -0.38
CLK3-207ENST00000562389 IAPPP10997 89 aa12.69□□□□□ -0.38
CLK3-207ENST00000562389 SLC25A4P12235 298 aa12.69□□□□□ -0.38
CLK3-207ENST00000562389 NKX2-1P43699 371 aaPredicted RBP12.69□□□□□ -0.38
CLK3-207ENST00000562389 IAH1Q2TAA2 248 aaPredicted RBP12.69□□□□□ -0.38
CLK3-207ENST00000562389 ETFRF1Q6IPR1 90 aa12.69□□□□□ -0.38
CLK3-207ENST00000562389 OR2K2Q8NGT1 345 aa12.69□□□□□ -0.38
CLK3-207ENST00000562389 MRAPQ8TCY5 172 aa12.69□□□□□ -0.38
CLK3-207ENST00000562389 ZNF414Q96IQ9 312 aa12.69□□□□□ -0.38
CLK3-207ENST00000562389 OR10C1Q96KK4 312 aa12.69□□□□□ -0.38
CLK3-207ENST00000562389 MAGT1Q9H0U3 335 aa12.69□□□□□ -0.38
CLK3-207ENST00000562389 SORL1Q92673 2214 aa12.68□□□□□ -0.38
CLK3-207ENST00000562389 PRAF2O60831 178 aa12.68□□□□□ -0.38
CLK3-207ENST00000562389 CLN5O75503 358 aa12.68□□□□□ -0.38
CLK3-207ENST00000562389 TMEM50AO95807 157 aa12.68□□□□□ -0.38
CLK3-207ENST00000562389 FOLR2P14207 255 aa12.68□□□□□ -0.38
CLK3-207ENST00000562389 SPNP16150 400 aa12.68□□□□□ -0.38
CLK3-207ENST00000562389 EDN2P20800 178 aa12.68□□□□□ -0.38
CLK3-207ENST00000562389 MLANAQ16655 118 aa12.68□□□□□ -0.38
CLK3-207ENST00000562389 ZBTB8BQ8NAP8 495 aaPredicted RBP12.68□□□□□ -0.38
CLK3-207ENST00000562389 PRR25Q96S07 402 aa12.68□□□□□ -0.38
CLK3-207ENST00000562389 MARVELD1Q9BSK0 173 aa12.68□□□□□ -0.38
CLK3-207ENST00000562389 GPN1Q9HCN4 374 aaPredicted RBP12.68□□□□□ -0.38
CLK3-207ENST00000562389 MRPL36Q9P0J6 103 aaKnown RBP12.68□□□□□ -0.38
CLK3-207ENST00000562389 C15orf62A8K5M9 175 aa12.67□□□□□ -0.38
CLK3-207ENST00000562389 INMT-MINDY4F8WBC2 141 aa12.67□□□□□ -0.38
CLK3-207ENST00000562389 WRBO00258 174 aa12.67□□□□□ -0.38
CLK3-207ENST00000562389 CCSO14618 274 aa12.67□□□□□ -0.38
CLK3-207ENST00000562389 SCGB2A1O75556 95 aa12.67□□□□□ -0.38
CLK3-207ENST00000562389 C8orf88P0DMB2 117 aa12.67□□□□□ -0.38
CLK3-207ENST00000562389 CBLN1P23435 193 aa12.67□□□□□ -0.38
CLK3-207ENST00000562389 RPP30P78346 268 aaKnown RBP12.67□□□□□ -0.38
CLK3-207ENST00000562389 CD69Q07108 199 aa12.67□□□□□ -0.38
CLK3-207ENST00000562389 TM4SF20Q53R12 229 aa12.67□□□□□ -0.38
CLK3-207ENST00000562389 PRSS54Q6PEW0 395 aa12.67□□□□□ -0.38
CLK3-207ENST00000562389 TMEM116Q8NCL8 245 aa12.67□□□□□ -0.38
CLK3-207ENST00000562389 DYNLRB2Q8TF09 96 aa12.67□□□□□ -0.38
CLK3-207ENST00000562389 MARC2Q969Z3 335 aa12.67□□□□□ -0.38
CLK3-207ENST00000562389 DAZ1Q9NQZ3 744 aaKnown RBP12.67□□□□□ -0.38
CLK3-207ENST00000562389 TECRQ9NZ01 308 aaKnown RBP12.67□□□□□ -0.38
CLK3-207ENST00000562389 TRAV30A0A087WSZ9 112 aa12.66□□□□□ -0.38
CLK3-207ENST00000562389 K7EMT4 169 aa12.66□□□□□ -0.38
CLK3-207ENST00000562389 IFNA4P05014 189 aa12.66□□□□□ -0.38
CLK3-207ENST00000562389 GP9P14770 177 aa12.66□□□□□ -0.38
CLK3-207ENST00000562389 POLR2GP62487 172 aaKnown RBP eCLIP12.66□□□□□ -0.38
CLK3-207ENST00000562389 RAB11AP62491 216 aa12.66□□□□□ -0.38
CLK3-207ENST00000562389 LCN12Q6JVE5 192 aa12.66□□□□□ -0.38
CLK3-207ENST00000562389 SLC16A13Q7RTY0 426 aa12.66□□□□□ -0.38
CLK3-207ENST00000562389 UXS1Q8NBZ7 420 aa12.66□□□□□ -0.38
CLK3-207ENST00000562389 CACNG8Q8WXS5 425 aa12.66□□□□□ -0.38
CLK3-207ENST00000562389 MRPL27Q9P0M9 148 aaKnown RBP12.66□□□□□ -0.38
CLK3-207ENST00000562389 SNRPGP15A8MWD9 76 aa12.65□□□□□ -0.38
CLK3-207ENST00000562389 RND2P52198 227 aa12.65□□□□□ -0.38
CLK3-207ENST00000562389 DCTN2Q13561 401 aaKnown RBP12.65□□□□□ -0.38
CLK3-207ENST00000562389 DEFB114Q30KQ6 69 aa12.65□□□□□ -0.38
CLK3-207ENST00000562389 ZNF600Q6ZNG1 722 aa12.65□□□□□ -0.38
CLK3-207ENST00000562389 GSKIPQ9P0R6 139 aa12.65□□□□□ -0.38
CLK3-207ENST00000562389 C5orf51A6NDU8 294 aa12.64□□□□□ -0.39
CLK3-207ENST00000562389 FAM25EA8MYX2 175 aa12.64□□□□□ -0.39
CLK3-207ENST00000562389 SSSCA1O60232 199 aa12.64□□□□□ -0.39
CLK3-207ENST00000562389 SCGB1D2O95969 90 aa12.64□□□□□ -0.39
CLK3-207ENST00000562389 IGLC1P0CG04 106 aa12.64□□□□□ -0.39
CLK3-207ENST00000562389 GPX4P36969 197 aaPredicted RBP12.64□□□□□ -0.39
CLK3-207ENST00000562389 CD300EQ496F6 205 aaPredicted RBP12.64□□□□□ -0.39
CLK3-207ENST00000562389 OR1S2Q8NGQ3 325 aa12.64□□□□□ -0.39
CLK3-207ENST00000562389 SMIM8Q96KF7 97 aa12.64□□□□□ -0.39
CLK3-207ENST00000562389 C20orf24Q9BUV8 137 aa12.64□□□□□ -0.39
CLK3-207ENST00000562389 MLXQ9UH92 298 aa12.64□□□□□ -0.39
CLK3-207ENST00000562389 RCL1Q9Y2P8 373 aaKnown RBP12.64□□□□□ -0.39
CLK3-207ENST00000562389 IGHV3OR16-8A0A075B7F1 116 aa12.63□□□□□ -0.39
CLK3-207ENST00000562389 IZUMO1RA6ND01 250 aa12.63□□□□□ -0.39
CLK3-207ENST00000562389 YIF1AO95070 293 aa12.63□□□□□ -0.39
CLK3-207ENST00000562389 PTTG1O95997 202 aa12.63□□□□□ -0.39
CLK3-207ENST00000562389 IGKV1-17P01599 117 aa12.63□□□□□ -0.39
CLK3-207ENST00000562389 MBPP02686 304 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms