RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 TAS2R19P59542 299 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 NANOS3P60323 173 aaKnown RBP4.42□□□□□ -1.7
CAPN3-211ENST00000562199 YPEL3P61236 119 aaPredicted RBP4.42□□□□□ -1.7
CAPN3-211ENST00000562199 CX3CL1P78423 397 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 ARFRP1Q13795 201 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 DIAPH2-AS1Q14236 149 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 HES1Q14469 280 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 ZNF506Q5JVG8 444 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 LY6G5CQ5SRR4 150 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 STPG1Q5TH74 334 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 LYRM7Q5U5X0 104 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 C11orf87Q6NUJ2 197 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 LHFPL1Q86WI0 220 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 SAXO1Q8IYX7 474 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 PRR22Q8IZ63 422 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 OR1J1Q8NGS3 322 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 OR4A5Q8NH83 315 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 SSC4DQ8WTU2 575 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 RTN4IP1Q8WWV3 396 aaPredicted RBP4.42□□□□□ -1.7
CAPN3-211ENST00000562199 DDB2Q92466 427 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 GPX7Q96SL4 187 aaPredicted RBP4.42□□□□□ -1.7
CAPN3-211ENST00000562199 C6orf106Q9H6K1 298 aaPredicted RBP4.42□□□□□ -1.7
CAPN3-211ENST00000562199 CACFD1Q9UGQ2 172 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 CCL26Q9Y258 94 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 NOP16Q9Y3C1 178 aaKnown RBP4.42□□□□□ -1.7
CAPN3-211ENST00000562199 MPC1Q9Y5U8 109 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 LTBP2Q14767 1821 aa4.42□□□□□ -1.7
CAPN3-211ENST00000562199 A0A1B0GWB2 263 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 MED19A0JLT2 244 aaPredicted RBP4.41□□□□□ -1.7
CAPN3-211ENST00000562199 C5orf49A4QMS7 147 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 TMEM235A6NFC5 223 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 OR2T8A6NH00 312 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 ZNF705FA8MVS1 300 aaPredicted RBP4.41□□□□□ -1.7
CAPN3-211ENST00000562199 PRR32B1ATL7 298 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 HOXA3O43365 443 aaPredicted RBP4.41□□□□□ -1.7
CAPN3-211ENST00000562199 WISP2O76076 250 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 STATHP02808 62 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 CISD3P0C7P0 127 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 ZNF705DP0CH99 300 aaPredicted RBP4.41□□□□□ -1.7
CAPN3-211ENST00000562199 ZNF705BP0CI00 300 aaPredicted RBP4.41□□□□□ -1.7
CAPN3-211ENST00000562199 PGA4P0DJD7 388 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 PGA5P0DJD9 388 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 PEBP1P30086 187 aaKnown RBP4.41□□□□□ -1.7
CAPN3-211ENST00000562199 PPP1CCP36873 323 aaKnown RBP4.41□□□□□ -1.7
CAPN3-211ENST00000562199 OPRK1P41145 380 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 EIF3IQ13347 325 aaKnown RBP4.41□□□□□ -1.7
CAPN3-211ENST00000562199 MLF2Q15773 248 aaPredicted RBP4.41□□□□□ -1.7
CAPN3-211ENST00000562199 BEAN1Q3B7T3 259 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 TTC32Q5I0X7 151 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 LINC01590Q5TEZ4 76 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 LCN12Q6JVE5 192 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 Q6ZN92 141 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 Q6ZRU5 148 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 FBXL14Q8N1E6 418 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 ANKRD29Q8N6D5 301 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 ZNF441Q8N8Z8 693 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 ZFP62Q8NB50 900 aaPredicted RBP4.41□□□□□ -1.7
CAPN3-211ENST00000562199 OR1J4Q8NGS1 313 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 OR4K13Q8NH42 304 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 OR1L3Q8NH93 324 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 FGF13Q92913 245 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 IMMP2LQ96T52 175 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 SLC25A21Q9BQT8 299 aaPredicted RBP4.41□□□□□ -1.7
CAPN3-211ENST00000562199 LAMTOR3Q9UHA4 124 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 KCNE5Q9UJ90 142 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 HEBP2Q9Y5Z4 205 aa4.41□□□□□ -1.7
CAPN3-211ENST00000562199 TCF20Q9UGU0 1960 aaKnown RBP4.4□□□□□ -1.7
CAPN3-211ENST00000562199 A0A087WWC5 75 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 SAA2-SAA4A0A096LPE2 208 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 A0A0A6YYD4 124 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 SLC17A2O00624 439 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 YPEL1O60688 119 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 SFT2D2O95562 160 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 CYB5AP00167 134 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 MT-ATP8P03928 68 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 CD3DP04234 171 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 IGLC2P0DOY2 106 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 IGLC3P0DOY3 106 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 PRSS3P35030 304 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 DRD3P35462 400 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 SAA4P35542 130 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 HINT1P49773 126 aaPredicted RBP4.4□□□□□ -1.71
CAPN3-211ENST00000562199 HERVK_113P63121 156 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 HBG1P69891 147 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 HBG2P69892 147 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 Q0VG73 95 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 FOXI1Q12951 378 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 DAZ2Q13117 558 aaKnown RBP4.4□□□□□ -1.71
CAPN3-211ENST00000562199 CD226Q15762 336 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 Q75L30 129 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 VN1R4Q7Z5H5 301 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 DAZ4Q86SG3 579 aaKnown RBP4.4□□□□□ -1.71
CAPN3-211ENST00000562199 FGF14Q92915 247 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 ELSPBP1Q96BH3 223 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 C4orf45Q96LM5 186 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 YPEL2Q96QA6 119 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 KXD1Q9BQD3 176 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 DAZ1Q9NQZ3 744 aaKnown RBP4.4□□□□□ -1.71
CAPN3-211ENST00000562199 DAZ3Q9NR90 486 aaKnown RBP4.4□□□□□ -1.71
CAPN3-211ENST00000562199 TMEM106BQ9NUM4 274 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms