RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 PRCDQ00LT1 54 aa8.35□□□□□ -1.07
NSMCE1-202ENST00000561960 RNASE12Q5GAN4 147 aaKnown RBP8.35□□□□□ -1.07
NSMCE1-202ENST00000561960 Q6ZRM9 215 aa8.35□□□□□ -1.07
NSMCE1-202ENST00000561960 DCANP1Q8TF63 244 aa8.35□□□□□ -1.07
NSMCE1-202ENST00000561960 TMEM230Q96A57 120 aa8.35□□□□□ -1.07
NSMCE1-202ENST00000561960 RAB40CQ96S21 281 aa8.35□□□□□ -1.07
NSMCE1-202ENST00000561960 ATP6V0BQ99437 205 aa8.35□□□□□ -1.07
NSMCE1-202ENST00000561960 TXN2Q99757 166 aa8.35□□□□□ -1.07
NSMCE1-202ENST00000561960 FNDC4Q9H6D8 234 aaPredicted RBP8.35□□□□□ -1.07
NSMCE1-202ENST00000561960 HELTA6NFD8 242 aa8.34□□□□□ -1.07
NSMCE1-202ENST00000561960 IFNA21P01568 189 aa8.34□□□□□ -1.07
NSMCE1-202ENST00000561960 IFNA17P01571 189 aa8.34□□□□□ -1.07
NSMCE1-202ENST00000561960 FGF9P31371 208 aaPredicted RBP8.34□□□□□ -1.07
NSMCE1-202ENST00000561960 ETV6P41212 452 aa8.34□□□□□ -1.07
NSMCE1-202ENST00000561960 TNP2Q05952 138 aa8.34□□□□□ -1.07
NSMCE1-202ENST00000561960 GDF5OSQ5U4N7 250 aa8.34□□□□□ -1.07
NSMCE1-202ENST00000561960 MORN3Q6PF18 240 aaPredicted RBP8.34□□□□□ -1.07
NSMCE1-202ENST00000561960 CMTM1Q8IZ96 169 aa8.34□□□□□ -1.07
NSMCE1-202ENST00000561960 SLC35G3Q8N808 338 aa8.34□□□□□ -1.07
NSMCE1-202ENST00000561960 METTL26Q96S19 204 aa8.34□□□□□ -1.07
NSMCE1-202ENST00000561960 DIABLOQ9NR28 239 aa8.34□□□□□ -1.07
NSMCE1-202ENST00000561960 FKBP11Q9NYL4 201 aa8.34□□□□□ -1.07
NSMCE1-202ENST00000561960 C16orf90A8MZG2 172 aa8.33□□□□□ -1.08
NSMCE1-202ENST00000561960 NXPH3O95157 252 aa8.33□□□□□ -1.08
NSMCE1-202ENST00000561960 FGF2P09038 288 aa8.33□□□□□ -1.08
NSMCE1-202ENST00000561960 OPRK1P41145 380 aa8.33□□□□□ -1.08
NSMCE1-202ENST00000561960 NPBWR1P48145 328 aa8.33□□□□□ -1.08
NSMCE1-202ENST00000561960 HOXA1P49639 335 aaPredicted RBP8.33□□□□□ -1.08
NSMCE1-202ENST00000561960 TAS2R20P59543 309 aa8.33□□□□□ -1.08
NSMCE1-202ENST00000561960 HSPE1P61604 102 aaKnown RBP8.33□□□□□ -1.08
NSMCE1-202ENST00000561960 ERHP84090 104 aaKnown RBP8.33□□□□□ -1.08
NSMCE1-202ENST00000561960 LGALS9BQ3B8N2 356 aa8.33□□□□□ -1.08
NSMCE1-202ENST00000561960 DHRS11Q6UWP2 260 aa8.33□□□□□ -1.08
NSMCE1-202ENST00000561960 Q6ZR54 194 aa8.33□□□□□ -1.08
NSMCE1-202ENST00000561960 SPARTQ8N0X7 666 aa8.33□□□□□ -1.08
NSMCE1-202ENST00000561960 ZNF114Q8NC26 417 aa8.33□□□□□ -1.08
NSMCE1-202ENST00000561960 M0QYG6 137 aa8.32□□□□□ -1.08
NSMCE1-202ENST00000561960 IGKV1-5P01602 117 aa8.32□□□□□ -1.08
NSMCE1-202ENST00000561960 PRM2P04554 102 aa8.32□□□□□ -1.08
NSMCE1-202ENST00000561960 RNASE2P10153 161 aaKnown RBP8.32□□□□□ -1.08
NSMCE1-202ENST00000561960 SNCAP37840 140 aa8.32□□□□□ -1.08
NSMCE1-202ENST00000561960 CBX5P45973 191 aa8.32□□□□□ -1.08
NSMCE1-202ENST00000561960 LYSMD2Q8IV50 215 aa8.32□□□□□ -1.08
NSMCE1-202ENST00000561960 OR6F1Q8NGZ6 308 aa8.32□□□□□ -1.08
NSMCE1-202ENST00000561960 TSC22D3Q99576 134 aa8.32□□□□□ -1.08
NSMCE1-202ENST00000561960 TMEM231Q9H6L2 316 aa8.32□□□□□ -1.08
NSMCE1-202ENST00000561960 BLOC1S6Q9UL45 172 aa8.32□□□□□ -1.08
NSMCE1-202ENST00000561960 TRAV2A0A0B4J234 112 aa8.31□□□□□ -1.08
NSMCE1-202ENST00000561960 A0A0B4J293 547 aa8.31□□□□□ -1.08
NSMCE1-202ENST00000561960 A0A0G2JRQ6 117 aa8.31□□□□□ -1.08
NSMCE1-202ENST00000561960 IGKV1-17P01599 117 aa8.31□□□□□ -1.08
NSMCE1-202ENST00000561960 NPY1RP25929 384 aa8.31□□□□□ -1.08
NSMCE1-202ENST00000561960 CRYBB3P26998 211 aa8.31□□□□□ -1.08
NSMCE1-202ENST00000561960 TSPAN5P62079 268 aa8.31□□□□□ -1.08
NSMCE1-202ENST00000561960 LSM3P62310 102 aaKnown RBP8.31□□□□□ -1.08
NSMCE1-202ENST00000561960 NEDD8Q15843 81 aa8.31□□□□□ -1.08
NSMCE1-202ENST00000561960 SP6Q3SY56 376 aa8.31□□□□□ -1.08
NSMCE1-202ENST00000561960 TMEM69Q5SWH9 247 aa8.31□□□□□ -1.08
NSMCE1-202ENST00000561960 C1orf134Q5TEV5 83 aa8.31□□□□□ -1.08
NSMCE1-202ENST00000561960 FAM222AQ5U5X8 452 aa8.31□□□□□ -1.08
NSMCE1-202ENST00000561960 TMEM88Q6PEY1 159 aa8.31□□□□□ -1.08
NSMCE1-202ENST00000561960 SAMD12Q8N8I0 201 aa8.31□□□□□ -1.08
NSMCE1-202ENST00000561960 GRAMD2BQ96HH9 432 aa8.31□□□□□ -1.08
NSMCE1-202ENST00000561960 A0A1W2PS18 150 aa8.3□□□□□ -1.08
NSMCE1-202ENST00000561960 FAM90A26D6RGX4 464 aa8.3□□□□□ -1.08
NSMCE1-202ENST00000561960 CLN5O75503 358 aa8.3□□□□□ -1.08
NSMCE1-202ENST00000561960 CD74P04233 296 aa8.3□□□□□ -1.08
NSMCE1-202ENST00000561960 PRB4P10163 310 aaPredicted RBP8.3□□□□□ -1.08
NSMCE1-202ENST00000561960 PGAM2P15259 253 aa8.3□□□□□ -1.08
NSMCE1-202ENST00000561960 AKR1C2P52895 323 aa8.3□□□□□ -1.08
NSMCE1-202ENST00000561960 USF2Q15853 346 aaPredicted RBP8.3□□□□□ -1.08
NSMCE1-202ENST00000561960 SNX29P2Q8IUI4 249 aa8.3□□□□□ -1.08
NSMCE1-202ENST00000561960 GLMPQ8WWB7 406 aa8.3□□□□□ -1.08
NSMCE1-202ENST00000561960 BORCS5Q969J3 196 aa8.3□□□□□ -1.08
NSMCE1-202ENST00000561960 TP53RKQ96S44 253 aa8.3□□□□□ -1.08
NSMCE1-202ENST00000561960 SLC35B3Q9H1N7 401 aa8.3□□□□□ -1.08
NSMCE1-202ENST00000561960 ANAPC10Q9UM13 185 aa8.3□□□□□ -1.08
NSMCE1-202ENST00000561960 F6UB75 175 aa8.29□□□□□ -1.08
NSMCE1-202ENST00000561960 H3BMM0 161 aa8.29□□□□□ -1.08
NSMCE1-202ENST00000561960 CD5P06127 495 aa8.29□□□□□ -1.08
NSMCE1-202ENST00000561960 SPART-AS1P0CW21 52 aa8.29□□□□□ -1.08
NSMCE1-202ENST00000561960 RND2P52198 227 aa8.29□□□□□ -1.08
NSMCE1-202ENST00000561960 TAS2R46P59540 309 aa8.29□□□□□ -1.08
NSMCE1-202ENST00000561960 DHODHQ02127 395 aa8.29□□□□□ -1.08
NSMCE1-202ENST00000561960 TMEM41BQ5BJD5 291 aa8.29□□□□□ -1.08
NSMCE1-202ENST00000561960 UBE2NLQ5JXB2 153 aa8.29□□□□□ -1.08
NSMCE1-202ENST00000561960 C16orf54Q6UWD8 224 aa8.29□□□□□ -1.08
NSMCE1-202ENST00000561960 NARS2Q96I59 477 aaKnown RBP8.29□□□□□ -1.08
NSMCE1-202ENST00000561960 LINC00052Q96N35 136 aa8.29□□□□□ -1.08
NSMCE1-202ENST00000561960 A0A0A6YYH2 397 aa8.28□□□□□ -1.08
NSMCE1-202ENST00000561960 A6NJ64 397 aa8.28□□□□□ -1.08
NSMCE1-202ENST00000561960 IL4P05112 153 aa8.28□□□□□ -1.08
NSMCE1-202ENST00000561960 HNRNPCP07910 306 aaKnown RBP eCLIP8.28□□□□□ -1.08
NSMCE1-202ENST00000561960 PRSS3P35030 304 aa8.28□□□□□ -1.08
NSMCE1-202ENST00000561960 GABARAPL2P60520 117 aa8.28□□□□□ -1.08
NSMCE1-202ENST00000561960 OR4B1Q8NGF8 309 aa8.28□□□□□ -1.08
NSMCE1-202ENST00000561960 S100A16Q96FQ6 103 aaKnown RBP8.28□□□□□ -1.08
NSMCE1-202ENST00000561960 NIPSNAP3BQ9BS92 247 aa8.28□□□□□ -1.08
NSMCE1-202ENST00000561960 WDR12Q9GZL7 423 aaKnown RBP8.28□□□□□ -1.08
NSMCE1-202ENST00000561960 DKK2Q9UBU2 259 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms