RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 IL18Q14116 193 aa7.62□□□□□ -1.19
CLK3-205ENST00000561673 MLANAQ16655 118 aa7.62□□□□□ -1.19
CLK3-205ENST00000561673 FAM90A2PQ658T7 463 aa7.62□□□□□ -1.19
CLK3-205ENST00000561673 TOMM20LQ6UXN7 152 aa7.62□□□□□ -1.19
CLK3-205ENST00000561673 APRG1Q8IVJ8 170 aa7.62□□□□□ -1.19
CLK3-205ENST00000561673 SELENOHQ8IZQ5 122 aaKnown RBP7.62□□□□□ -1.19
CLK3-205ENST00000561673 OR4C16Q8NGL9 310 aa7.62□□□□□ -1.19
CLK3-205ENST00000561673 LHFPL5Q8TAF8 219 aa7.62□□□□□ -1.19
CLK3-205ENST00000561673 PDCD10Q9BUL8 212 aa7.62□□□□□ -1.19
CLK3-205ENST00000561673 NAA60Q9H7X0 242 aa7.62□□□□□ -1.19
CLK3-205ENST00000561673 CCDC59Q9P031 241 aaKnown RBP7.62□□□□□ -1.19
CLK3-205ENST00000561673 C14orf166Q9Y224 244 aaKnown RBP7.62□□□□□ -1.19
CLK3-205ENST00000561673 IGKV3-7A0A075B6H7 116 aa7.61□□□□□ -1.19
CLK3-205ENST00000561673 SPRY2O43597 315 aa7.61□□□□□ -1.19
CLK3-205ENST00000561673 APOHP02749 345 aaPredicted RBP7.61□□□□□ -1.19
CLK3-205ENST00000561673 AKAIN1P0CW23 69 aa7.61□□□□□ -1.19
CLK3-205ENST00000561673 RPL35AP18077 110 aaKnown RBP7.61□□□□□ -1.19
CLK3-205ENST00000561673 TFPI2P48307 235 aa7.61□□□□□ -1.19
CLK3-205ENST00000561673 HOXA1P49639 335 aaPredicted RBP7.61□□□□□ -1.19
CLK3-205ENST00000561673 SPCS3P61009 180 aa7.61□□□□□ -1.19
CLK3-205ENST00000561673 SURF2Q15527 256 aaPredicted RBP7.61□□□□□ -1.19
CLK3-205ENST00000561673 BSXQ3C1V8 233 aa7.61□□□□□ -1.19
CLK3-205ENST00000561673 AARDQ4LEZ3 155 aa7.61□□□□□ -1.19
CLK3-205ENST00000561673 Q6ZWC4 215 aa7.61□□□□□ -1.19
CLK3-205ENST00000561673 LILRB2Q8N423 598 aa7.61□□□□□ -1.19
CLK3-205ENST00000561673 GBGT1Q8N5D6 347 aa7.61□□□□□ -1.19
CLK3-205ENST00000561673 OR51S1Q8NGJ8 323 aa7.61□□□□□ -1.19
CLK3-205ENST00000561673 RNASE11Q8TAA1 199 aaKnown RBP7.61□□□□□ -1.19
CLK3-205ENST00000561673 ST8SIA2Q92186 375 aa7.61□□□□□ -1.19
CLK3-205ENST00000561673 BCL7BQ9BQE9 202 aa7.61□□□□□ -1.19
CLK3-205ENST00000561673 FNDC4Q9H6D8 234 aaPredicted RBP7.61□□□□□ -1.19
CLK3-205ENST00000561673 ENY2Q9NPA8 101 aa7.61□□□□□ -1.19
CLK3-205ENST00000561673 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.61□□□□□ -1.19
CLK3-205ENST00000561673 MRPL36Q9P0J6 103 aaKnown RBP7.61□□□□□ -1.19
CLK3-205ENST00000561673 RABL2AQ9UBK7 228 aaPredicted RBP7.61□□□□□ -1.19
CLK3-205ENST00000561673 RABL2BQ9UNT1 228 aa7.61□□□□□ -1.19
CLK3-205ENST00000561673 GPR132Q9UNW8 380 aa7.61□□□□□ -1.19
CLK3-205ENST00000561673 PUS1Q9Y606 427 aaKnown RBP eCLIP7.61□□□□□ -1.19
CLK3-205ENST00000561673 IGHV3-66A0A0C4DH42 116 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 KIR2DL5BA0A0G2JN68 375 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 KIR2DL5BA0A0G2JPC4 375 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 A0A1B0GU03 582 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 ANKRD20A5PA0PJZ0 165 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 CRYM-AS1A6NIL9 109 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 H3BMQ9 156 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 CORTO00230 105 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 UBE2CO00762 179 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 GSTZ1O43708 216 aaPredicted RBP7.6□□□□□ -1.19
CLK3-205ENST00000561673 BMI1P35226 326 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 RPL5P46777 297 aaKnown RBP7.6□□□□□ -1.19
CLK3-205ENST00000561673 DHODHQ02127 395 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 ZNF124Q15973 351 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 DEFB135Q30KP9 77 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 ZNF600Q6ZNG1 722 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 TCF24Q7RTU0 167 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 WFDC3Q8IUB2 231 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 FAM219AQ8IW50 185 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 KIR2DL5AQ8N109 375 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 STPG3Q8N7X2 389 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 OR52E5Q8NH55 327 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 KIR2DL5BQ8NHK3 375 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 RBPMSQ93062 196 aaKnown RBP7.6□□□□□ -1.19
CLK3-205ENST00000561673 GPR146Q96CH1 333 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 GALNT14Q96FL9 552 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 PRRT1Q99946 306 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 SOSTQ9BQB4 213 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 GINS3Q9BRX5 216 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 SLIRPQ9GZT3 109 aaKnown RBP7.6□□□□□ -1.19
CLK3-205ENST00000561673 C6orf62Q9GZU0 229 aaPredicted RBP7.6□□□□□ -1.19
CLK3-205ENST00000561673 VSIRQ9H7M9 311 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 MAP6D1Q9H9H5 199 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 TP53TG1Q9Y2A0 90 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 TMEM56-RWDD3S4R434 201 aa7.6□□□□□ -1.19
CLK3-205ENST00000561673 A0A0J9YWU9 116 aa7.59□□□□□ -1.19
CLK3-205ENST00000561673 CLN5O75503 358 aa7.59□□□□□ -1.19
CLK3-205ENST00000561673 DFFBO76075 338 aa7.59□□□□□ -1.19
CLK3-205ENST00000561673 CD5P06127 495 aa7.59□□□□□ -1.19
CLK3-205ENST00000561673 TNFSF8P32971 234 aa7.59□□□□□ -1.19
CLK3-205ENST00000561673 OPRK1P41145 380 aa7.59□□□□□ -1.19
CLK3-205ENST00000561673 HTR2BP41595 481 aa7.59□□□□□ -1.19
CLK3-205ENST00000561673 CMC4P56277 68 aaPredicted RBP7.59□□□□□ -1.19
CLK3-205ENST00000561673 PAFAH1B2P68402 229 aa7.59□□□□□ -1.19
CLK3-205ENST00000561673 EWSR1Q01844 656 aaKnown RBP eCLIP7.59□□□□□ -1.19
CLK3-205ENST00000561673 TMEM268Q5VZI3 342 aa7.59□□□□□ -1.19
CLK3-205ENST00000561673 OR4X1Q8NH49 305 aa7.59□□□□□ -1.19
CLK3-205ENST00000561673 RNF183Q96D59 192 aa7.59□□□□□ -1.19
CLK3-205ENST00000561673 MS4A6AQ9H2W1 248 aa7.59□□□□□ -1.19
CLK3-205ENST00000561673 CACNG5Q9UF02 275 aa7.59□□□□□ -1.19
CLK3-205ENST00000561673 RSL24D1Q9UHA3 163 aaKnown RBP7.59□□□□□ -1.19
CLK3-205ENST00000561673 FABP12A6NFH5 140 aa7.58□□□□□ -1.2
CLK3-205ENST00000561673 IGKV1-17P01599 117 aa7.58□□□□□ -1.2
CLK3-205ENST00000561673 NPPCP23582 126 aa7.58□□□□□ -1.2
CLK3-205ENST00000561673 RPL11P62913 178 aaKnown RBP7.58□□□□□ -1.2
CLK3-205ENST00000561673 TNFRSF9Q07011 255 aa7.58□□□□□ -1.2
CLK3-205ENST00000561673 TMEM187Q14656 261 aa7.58□□□□□ -1.2
CLK3-205ENST00000561673 LYG2Q86SG7 212 aa7.58□□□□□ -1.2
CLK3-205ENST00000561673 TMEM230Q96A57 120 aa7.58□□□□□ -1.2
CLK3-205ENST00000561673 CSTL1Q9H114 145 aa7.58□□□□□ -1.2
CLK3-205ENST00000561673 HEYLQ9NQ87 328 aaPredicted RBP7.58□□□□□ -1.2
CLK3-205ENST00000561673 MCUBQ9NWR8 336 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms