RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 ATP6V1DQ9Y5K8 247 aa0.43□□□□□ -2.34
USP8-218ENST00000561330 RALGAPA2Q2PPJ7 1873 aa0.43□□□□□ -2.34
USP8-218ENST00000561330 TRAV9-1A0A075B6T8 112 aa0.42□□□□□ -2.34
USP8-218ENST00000561330 A0A1W2PPM0 123 aa0.42□□□□□ -2.34
USP8-218ENST00000561330 PSMD12O00232 456 aaPredicted RBP0.42□□□□□ -2.34
USP8-218ENST00000561330 TPM3P06753 285 aa0.42□□□□□ -2.34
USP8-218ENST00000561330 SNRPD2P62316 118 aaKnown RBP0.42□□□□□ -2.34
USP8-218ENST00000561330 C1orf137Q5JT78 98 aa0.42□□□□□ -2.34
USP8-218ENST00000561330 TMEM70Q9BUB7 260 aa0.42□□□□□ -2.34
USP8-218ENST00000561330 NKIRAS1Q9NYS0 192 aa0.42□□□□□ -2.34
USP8-218ENST00000561330 EXOC1LA0A1B0GW35 172 aa0.41□□□□□ -2.34
USP8-218ENST00000561330 BUB1B-PAK6H3BSN5 160 aa0.41□□□□□ -2.34
USP8-218ENST00000561330 TGOLN2O43493 480 aa0.41□□□□□ -2.34
USP8-218ENST00000561330 TNNC2P02585 160 aa0.41□□□□□ -2.34
USP8-218ENST00000561330 CALB1P05937 261 aa0.41□□□□□ -2.34
USP8-218ENST00000561330 PSME3P61289 254 aa0.41□□□□□ -2.34
USP8-218ENST00000561330 HIST3H3Q16695 136 aa0.41□□□□□ -2.34
USP8-218ENST00000561330 TEX261Q6UWH6 196 aa0.41□□□□□ -2.34
USP8-218ENST00000561330 TMEM86BQ8N661 226 aa0.41□□□□□ -2.34
USP8-218ENST00000561330 ANKRD29Q8N6D5 301 aa0.41□□□□□ -2.34
USP8-218ENST00000561330 C3orf56Q8N813 242 aa0.41□□□□□ -2.34
USP8-218ENST00000561330 OR10J5Q8NHC4 309 aa0.41□□□□□ -2.34
USP8-218ENST00000561330 PTH2Q96A98 100 aa0.41□□□□□ -2.34
USP8-218ENST00000561330 OR52E6Q96RD3 313 aa0.41□□□□□ -2.34
USP8-218ENST00000561330 MRPS26Q9BYN8 205 aaKnown RBP0.41□□□□□ -2.34
USP8-218ENST00000561330 HS3ST2Q9Y278 367 aa0.41□□□□□ -2.34
USP8-218ENST00000561330 U3KQ87 197 aa0.41□□□□□ -2.34
USP8-218ENST00000561330 KMT2DO14686 5537 aa0.41□□□□□ -2.34
USP8-218ENST00000561330 MAP3K5Q99683 1374 aa0.41□□□□□ -2.34
USP8-218ENST00000561330 CCDC160A6NGH7 325 aa0.4□□□□□ -2.35
USP8-218ENST00000561330 ZNF736B4DX44 427 aaPredicted RBP0.4□□□□□ -2.35
USP8-218ENST00000561330 FAAHO00519 579 aa0.4□□□□□ -2.35
USP8-218ENST00000561330 SPCS3P61009 180 aa0.4□□□□□ -2.35
USP8-218ENST00000561330 TPM4P67936 248 aa0.4□□□□□ -2.35
USP8-218ENST00000561330 C4orf3Q8WVX3 66 aa0.4□□□□□ -2.35
USP8-218ENST00000561330 GPR146Q96CH1 333 aa0.4□□□□□ -2.35
USP8-218ENST00000561330 OSTCQ9NRP0 149 aa0.4□□□□□ -2.35
USP8-218ENST00000561330 NHP2Q9NX24 153 aaKnown RBP0.4□□□□□ -2.35
USP8-218ENST00000561330 SLC35A3Q9Y2D2 325 aa0.4□□□□□ -2.35
USP8-218ENST00000561330 TMEM56-RWDD3S4R434 201 aa0.4□□□□□ -2.35
USP8-218ENST00000561330 MTUS2Q5JR59 1369 aa0.4□□□□□ -2.35
USP8-218ENST00000561330 CD79AP11912 226 aa0.39□□□□□ -2.35
USP8-218ENST00000561330 HIST1H1TP22492 207 aaPredicted RBP0.39□□□□□ -2.35
USP8-218ENST00000561330 CDC42P60953 191 aa0.39□□□□□ -2.35
USP8-218ENST00000561330 OR13D1Q8NGV5 346 aa0.39□□□□□ -2.35
USP8-218ENST00000561330 PATE1Q8WXA2 126 aa0.39□□□□□ -2.35
USP8-218ENST00000561330 LLPHQ9BRT6 129 aaKnown RBP0.39□□□□□ -2.35
USP8-218ENST00000561330 CNTRLQ7Z7A1 2325 aa0.39□□□□□ -2.35
USP8-218ENST00000561330 CCDC88AQ3V6T2 1871 aa0.38□□□□□ -2.35
USP8-218ENST00000561330 TRAV3A0A0B4J244 114 aa0.38□□□□□ -2.35
USP8-218ENST00000561330 RPL5P46777 297 aaKnown RBP0.38□□□□□ -2.35
USP8-218ENST00000561330 SRSF6Q13247 344 aaKnown RBP0.38□□□□□ -2.35
USP8-218ENST00000561330 DEFB113Q30KQ7 82 aa0.38□□□□□ -2.35
USP8-218ENST00000561330 SPOPLQ6IQ16 392 aa0.38□□□□□ -2.35
USP8-218ENST00000561330 TRAPPC6BQ86SZ2 158 aa0.38□□□□□ -2.35
USP8-218ENST00000561330 PPP1R2P1Q96PQ5 205 aa0.38□□□□□ -2.35
USP8-218ENST00000561330 NUP155O75694 1391 aa0.37□□□□□ -2.35
USP8-218ENST00000561330 S100A4P26447 101 aaKnown RBP0.37□□□□□ -2.35
USP8-218ENST00000561330 RPS20P60866 119 aaKnown RBP0.37□□□□□ -2.35
USP8-218ENST00000561330 OR2F1Q13607 317 aa0.37□□□□□ -2.35
USP8-218ENST00000561330 C8orf74Q6P047 294 aa0.37□□□□□ -2.35
USP8-218ENST00000561330 TSPAN32Q96QS1 320 aa0.37□□□□□ -2.35
USP8-218ENST00000561330 C10orf95Q9H7T3 257 aa0.37□□□□□ -2.35
USP8-218ENST00000561330 PKIGQ9Y2B9 76 aa0.37□□□□□ -2.35
USP8-218ENST00000561330 EML5Q05BV3 1969 aa0.36□□□□□ -2.35
USP8-218ENST00000561330 TGIF2-C20orf24A0A0A6YYL0 155 aa0.36□□□□□ -2.35
USP8-218ENST00000561330 CETN3O15182 167 aa0.36□□□□□ -2.35
USP8-218ENST00000561330 OR2J2O76002 312 aa0.36□□□□□ -2.35
USP8-218ENST00000561330 CRYZL1O95825 349 aa0.36□□□□□ -2.35
USP8-218ENST00000561330 DNAL4O96015 105 aa0.36□□□□□ -2.35
USP8-218ENST00000561330 HIST1H1EP10412 219 aaKnown RBP0.36□□□□□ -2.35
USP8-218ENST00000561330 EFNA4P52798 201 aa0.36□□□□□ -2.35
USP8-218ENST00000561330 MAGOHP61326 146 aaKnown RBP0.36□□□□□ -2.35
USP8-218ENST00000561330 GKN2Q86XP6 184 aa0.36□□□□□ -2.35
USP8-218ENST00000561330 CLECL1Q8IZS7 167 aa0.36□□□□□ -2.35
USP8-218ENST00000561330 OR51V1Q9H2C8 321 aa0.36□□□□□ -2.35
USP8-218ENST00000561330 USP24Q9UPU5 2620 aa0.35□□□□□ -2.35
USP8-218ENST00000561330 CCL25O15444 150 aa0.35□□□□□ -2.35
USP8-218ENST00000561330 DEFA1P59665 94 aa0.35□□□□□ -2.35
USP8-218ENST00000561330 PSG9Q00887 426 aa0.35□□□□□ -2.35
USP8-218ENST00000561330 OR52R1Q8NGF1 315 aa0.35□□□□□ -2.35
USP8-218ENST00000561330 TEX47Q8TBZ9 253 aa0.35□□□□□ -2.35
USP8-218ENST00000561330 ITFG2Q969R8 447 aa0.35□□□□□ -2.35
USP8-218ENST00000561330 C20orf27Q9GZN8 174 aa0.35□□□□□ -2.35
USP8-218ENST00000561330 EPDR1Q9UM22 224 aa0.35□□□□□ -2.35
USP8-218ENST00000561330 GUCA1BQ9UMX6 200 aa0.35□□□□□ -2.35
USP8-218ENST00000561330 V9GYY5 206 aaPredicted RBP0.35□□□□□ -2.35
USP8-218ENST00000561330 PEAK1Q9H792 1746 aa0.35□□□□□ -2.35
USP8-218ENST00000561330 YPEL3P61236 119 aaPredicted RBP0.34□□□□□ -2.36
USP8-218ENST00000561330 WRNQ14191 1432 aaPredicted RBP eCLIP0.34□□□□□ -2.36
USP8-218ENST00000561330 ACOT6Q3I5F7 207 aaPredicted RBP0.34□□□□□ -2.36
USP8-218ENST00000561330 SPRNQ5BIV9 151 aa0.34□□□□□ -2.36
USP8-218ENST00000561330 CDKL4Q5MAI5 379 aa0.34□□□□□ -2.36
USP8-218ENST00000561330 BRMS1LQ5PSV4 323 aa0.34□□□□□ -2.36
USP8-218ENST00000561330 FAM74A1Q5RGS3 127 aa0.34□□□□□ -2.36
USP8-218ENST00000561330 CCDC122Q5T0U0 273 aa0.34□□□□□ -2.36
USP8-218ENST00000561330 LINC00301Q8NCQ3 95 aa0.34□□□□□ -2.36
USP8-218ENST00000561330 DCSTAMPQ9H295 470 aa0.34□□□□□ -2.36
USP8-218ENST00000561330 COL1A1P02452 1464 aaPredicted RBP0.34□□□□□ -2.36
USP8-218ENST00000561330 EML6Q6ZMW3 1958 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms