RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 NPBWR1P48145 328 aa12.77□□□□□ -0.37
CDC42BPB-208ENST00000561271 TFPI2P48307 235 aa12.77□□□□□ -0.37
CDC42BPB-208ENST00000561271 SUB1P53999 127 aaKnown RBP eCLIP12.77□□□□□ -0.37
CDC42BPB-208ENST00000561271 DHODHQ02127 395 aa12.77□□□□□ -0.37
CDC42BPB-208ENST00000561271 TOMM20LQ6UXN7 152 aa12.77□□□□□ -0.37
CDC42BPB-208ENST00000561271 TMEM230Q96A57 120 aa12.77□□□□□ -0.37
CDC42BPB-208ENST00000561271 OVOL2Q9BRP0 275 aa12.77□□□□□ -0.37
CDC42BPB-208ENST00000561271 GINS3Q9BRX5 216 aa12.77□□□□□ -0.37
CDC42BPB-208ENST00000561271 FNDC4Q9H6D8 234 aaPredicted RBP12.77□□□□□ -0.37
CDC42BPB-208ENST00000561271 ZFAND3Q9H8U3 227 aa12.77□□□□□ -0.37
CDC42BPB-208ENST00000561271 MCUBQ9NWR8 336 aa12.77□□□□□ -0.37
CDC42BPB-208ENST00000561271 PUS1Q9Y606 427 aaKnown RBP eCLIP12.77□□□□□ -0.37
CDC42BPB-208ENST00000561271 TRAV14DV4A0A0A6YYC5 116 aa12.76□□□□□ -0.37
CDC42BPB-208ENST00000561271 FABP12A6NFH5 140 aa12.76□□□□□ -0.37
CDC42BPB-208ENST00000561271 SPCS3P61009 180 aa12.76□□□□□ -0.37
CDC42BPB-208ENST00000561271 BSXQ3C1V8 233 aa12.76□□□□□ -0.37
CDC42BPB-208ENST00000561271 AARDQ4LEZ3 155 aa12.76□□□□□ -0.37
CDC42BPB-208ENST00000561271 ZNF600Q6ZNG1 722 aa12.76□□□□□ -0.37
CDC42BPB-208ENST00000561271 ST8SIA2Q92186 375 aa12.76□□□□□ -0.37
CDC42BPB-208ENST00000561271 GPR146Q96CH1 333 aa12.76□□□□□ -0.37
CDC42BPB-208ENST00000561271 SOSTQ9BQB4 213 aa12.76□□□□□ -0.37
CDC42BPB-208ENST00000561271 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.76□□□□□ -0.37
CDC42BPB-208ENST00000561271 IGHV3-66A0A0C4DH42 116 aa12.75□□□□□ -0.37
CDC42BPB-208ENST00000561271 LCE6AA0A183 80 aa12.75□□□□□ -0.37
CDC42BPB-208ENST00000561271 A0A1B0GU03 582 aa12.75□□□□□ -0.37
CDC42BPB-208ENST00000561271 APOHP02749 345 aaPredicted RBP12.75□□□□□ -0.37
CDC42BPB-208ENST00000561271 RPL35AP18077 110 aaKnown RBP12.75□□□□□ -0.37
CDC42BPB-208ENST00000561271 APOC4P55056 127 aa12.75□□□□□ -0.37
CDC42BPB-208ENST00000561271 ZNF124Q15973 351 aa12.75□□□□□ -0.37
CDC42BPB-208ENST00000561271 DEFB135Q30KP9 77 aa12.75□□□□□ -0.37
CDC42BPB-208ENST00000561271 APRG1Q8IVJ8 170 aa12.75□□□□□ -0.37
CDC42BPB-208ENST00000561271 SCP2D1Q9UJQ7 156 aa12.75□□□□□ -0.37
CDC42BPB-208ENST00000561271 CCDC160A6NGH7 325 aa12.74□□□□□ -0.37
CDC42BPB-208ENST00000561271 TMEM50AO95807 157 aa12.74□□□□□ -0.37
CDC42BPB-208ENST00000561271 TMEM187Q14656 261 aa12.74□□□□□ -0.37
CDC42BPB-208ENST00000561271 MLANAQ16655 118 aa12.74□□□□□ -0.37
CDC42BPB-208ENST00000561271 TCF24Q7RTU0 167 aa12.74□□□□□ -0.37
CDC42BPB-208ENST00000561271 GBGT1Q8N5D6 347 aa12.74□□□□□ -0.37
CDC42BPB-208ENST00000561271 OR52E5Q8NH55 327 aa12.74□□□□□ -0.37
CDC42BPB-208ENST00000561271 HEYLQ9NQ87 328 aaPredicted RBP12.74□□□□□ -0.37
CDC42BPB-208ENST00000561271 TMEM56-RWDD3S4R434 201 aa12.74□□□□□ -0.37
CDC42BPB-208ENST00000561271 CEBPZOSA8MTT3 80 aa12.73□□□□□ -0.37
CDC42BPB-208ENST00000561271 CLN5O75503 358 aa12.73□□□□□ -0.37
CDC42BPB-208ENST00000561271 AKR1C4P17516 323 aa12.73□□□□□ -0.37
CDC42BPB-208ENST00000561271 HTR2BP41595 481 aa12.73□□□□□ -0.37
CDC42BPB-208ENST00000561271 FAM90A2PQ658T7 463 aa12.73□□□□□ -0.37
CDC42BPB-208ENST00000561271 SLC24A4Q8NFF2 622 aa12.73□□□□□ -0.37
CDC42BPB-208ENST00000561271 TRIM63Q969Q1 353 aa12.73□□□□□ -0.37
CDC42BPB-208ENST00000561271 GALNT14Q96FL9 552 aa12.73□□□□□ -0.37
CDC42BPB-208ENST00000561271 VSIRQ9H7M9 311 aa12.73□□□□□ -0.37
CDC42BPB-208ENST00000561271 SULT1A3P0DMM9 295 aa12.72□□□□□ -0.37
CDC42BPB-208ENST00000561271 SULT1A4P0DMN0 295 aa12.72□□□□□ -0.37
CDC42BPB-208ENST00000561271 BMI1P35226 326 aa12.72□□□□□ -0.37
CDC42BPB-208ENST00000561271 SUPT4H1P63272 117 aaKnown RBP12.72□□□□□ -0.37
CDC42BPB-208ENST00000561271 KLF9Q13886 244 aaPredicted RBP12.72□□□□□ -0.37
CDC42BPB-208ENST00000561271 TIGITQ495A1 244 aa12.72□□□□□ -0.37
CDC42BPB-208ENST00000561271 PYDC2Q56P42 97 aa12.72□□□□□ -0.37
CDC42BPB-208ENST00000561271 LILRB2Q8N423 598 aa12.72□□□□□ -0.37
CDC42BPB-208ENST00000561271 OR4X1Q8NH49 305 aa12.72□□□□□ -0.37
CDC42BPB-208ENST00000561271 TMEM170AQ8WVE7 144 aa12.72□□□□□ -0.37
CDC42BPB-208ENST00000561271 IL22RA2Q969J5 263 aa12.72□□□□□ -0.37
CDC42BPB-208ENST00000561271 MAP6D1Q9H9H5 199 aa12.72□□□□□ -0.37
CDC42BPB-208ENST00000561271 V9GYH0 126 aa12.72□□□□□ -0.37
CDC42BPB-208ENST00000561271 ALMS1Q8TCU4 4167 aa12.71□□□□□ -0.37
CDC42BPB-208ENST00000561271 DFFBO76075 338 aa12.71□□□□□ -0.37
CDC42BPB-208ENST00000561271 IGKV1-17P01599 117 aa12.71□□□□□ -0.37
CDC42BPB-208ENST00000561271 RND2P52198 227 aa12.71□□□□□ -0.37
CDC42BPB-208ENST00000561271 ZNF79Q15937 498 aa12.71□□□□□ -0.37
CDC42BPB-208ENST00000561271 C2orf83Q53S99 150 aa12.71□□□□□ -0.37
CDC42BPB-208ENST00000561271 WFDC3Q8IUB2 231 aa12.71□□□□□ -0.37
CDC42BPB-208ENST00000561271 IL17DQ8TAD2 202 aa12.71□□□□□ -0.37
CDC42BPB-208ENST00000561271 SCGB3A2Q96PL1 93 aa12.71□□□□□ -0.37
CDC42BPB-208ENST00000561271 KCNIP3Q9Y2W7 256 aa12.71□□□□□ -0.37
CDC42BPB-208ENST00000561271 RPS10-NUDT3A0A1W2PQS6 291 aa12.7□□□□□ -0.38
CDC42BPB-208ENST00000561271 SPRY2O43597 315 aa12.7□□□□□ -0.38
CDC42BPB-208ENST00000561271 NMSQ5H8A3 153 aa12.7□□□□□ -0.38
CDC42BPB-208ENST00000561271 Q6ZWC4 215 aa12.7□□□□□ -0.38
CDC42BPB-208ENST00000561271 LYZL2Q7Z4W2 148 aa12.7□□□□□ -0.38
CDC42BPB-208ENST00000561271 TMED4Q7Z7H5 227 aa12.7□□□□□ -0.38
CDC42BPB-208ENST00000561271 STPG3Q8N7X2 389 aa12.7□□□□□ -0.38
CDC42BPB-208ENST00000561271 RBM38Q9H0Z9 239 aaKnown RBP12.7□□□□□ -0.38
CDC42BPB-208ENST00000561271 TP53TG1Q9Y2A0 90 aa12.7□□□□□ -0.38
CDC42BPB-208ENST00000561271 DNAH1Q9P2D7 4330 aa12.7□□□□□ -0.38
CDC42BPB-208ENST00000561271 HYDINQ4G0P3 5121 aa12.69□□□□□ -0.38
CDC42BPB-208ENST00000561271 A0A0B4J2A0 478 aa12.69□□□□□ -0.38
CDC42BPB-208ENST00000561271 KIR2DL5BA0A0G2JN68 375 aa12.69□□□□□ -0.38
CDC42BPB-208ENST00000561271 KIR2DL5BA0A0G2JPC4 375 aa12.69□□□□□ -0.38
CDC42BPB-208ENST00000561271 A0A0J9YWU9 116 aa12.69□□□□□ -0.38
CDC42BPB-208ENST00000561271 UBE2CO00762 179 aa12.69□□□□□ -0.38
CDC42BPB-208ENST00000561271 SCGB2A1O75556 95 aa12.69□□□□□ -0.38
CDC42BPB-208ENST00000561271 NPY1RP25929 384 aa12.69□□□□□ -0.38
CDC42BPB-208ENST00000561271 FAUP35544 74 aaKnown RBP12.69□□□□□ -0.38
CDC42BPB-208ENST00000561271 RPL11P62913 178 aaKnown RBP12.69□□□□□ -0.38
CDC42BPB-208ENST00000561271 PRSS54Q6PEW0 395 aa12.69□□□□□ -0.38
CDC42BPB-208ENST00000561271 KIR2DL5AQ8N109 375 aa12.69□□□□□ -0.38
CDC42BPB-208ENST00000561271 TOMM5Q8N4H5 51 aa12.69□□□□□ -0.38
CDC42BPB-208ENST00000561271 FAM24BQ8N5W8 94 aa12.69□□□□□ -0.38
CDC42BPB-208ENST00000561271 KIR2DL5BQ8NHK3 375 aa12.69□□□□□ -0.38
CDC42BPB-208ENST00000561271 METTL26Q96S19 204 aa12.69□□□□□ -0.38
CDC42BPB-208ENST00000561271 MS4A6AQ9H2W1 248 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms