RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 TMED4Q7Z7H5 227 aa11.99□□□□□ -0.49
LMX1B-204ENST00000561065 DEFB125Q8N687 156 aa11.99□□□□□ -0.49
LMX1B-204ENST00000561065 UXS1Q8NBZ7 420 aa11.99□□□□□ -0.49
LMX1B-204ENST00000561065 SPATA25Q9BR10 227 aa11.99□□□□□ -0.49
LMX1B-204ENST00000561065 ZNF436Q9C0F3 470 aaPredicted RBP11.99□□□□□ -0.49
LMX1B-204ENST00000561065 DAZ1Q9NQZ3 744 aaKnown RBP11.99□□□□□ -0.49
LMX1B-204ENST00000561065 CACNG5Q9UF02 275 aa11.99□□□□□ -0.49
LMX1B-204ENST00000561065 RBMY1BA6NDE4 496 aaKnown RBP11.98□□□□□ -0.49
LMX1B-204ENST00000561065 RBMY1EA6NEQ0 496 aaKnown RBP11.98□□□□□ -0.49
LMX1B-204ENST00000561065 F8W735 103 aaPredicted RBP11.98□□□□□ -0.49
LMX1B-204ENST00000561065 I3L2K1 104 aa11.98□□□□□ -0.49
LMX1B-204ENST00000561065 RBMY1DP0C7P1 496 aaKnown RBP11.98□□□□□ -0.49
LMX1B-204ENST00000561065 GUCA2BQ16661 112 aa11.98□□□□□ -0.49
LMX1B-204ENST00000561065 IZUMO4Q1ZYL8 232 aa11.98□□□□□ -0.49
LMX1B-204ENST00000561065 ETFRF1Q6IPR1 90 aa11.98□□□□□ -0.49
LMX1B-204ENST00000561065 BTNL8Q6UX41 500 aa11.98□□□□□ -0.49
LMX1B-204ENST00000561065 GPR146Q96CH1 333 aa11.98□□□□□ -0.49
LMX1B-204ENST00000561065 ZNF414Q96IQ9 312 aa11.98□□□□□ -0.49
LMX1B-204ENST00000561065 GINS3Q9BRX5 216 aa11.98□□□□□ -0.49
LMX1B-204ENST00000561065 SRRQ9GZT4 340 aa11.98□□□□□ -0.49
LMX1B-204ENST00000561065 TRAV30A0A087WSZ9 112 aa11.97□□□□□ -0.49
LMX1B-204ENST00000561065 IGHV3-21A0A0B4J1V1 117 aa11.97□□□□□ -0.49
LMX1B-204ENST00000561065 A0A1B0GU03 582 aa11.97□□□□□ -0.49
LMX1B-204ENST00000561065 C15orf62A8K5M9 175 aa11.97□□□□□ -0.49
LMX1B-204ENST00000561065 YIF1AO95070 293 aa11.97□□□□□ -0.49
LMX1B-204ENST00000561065 CD5P06127 495 aa11.97□□□□□ -0.49
LMX1B-204ENST00000561065 VAMP1P23763 118 aa11.97□□□□□ -0.49
LMX1B-204ENST00000561065 SMCO1Q147U7 214 aa11.97□□□□□ -0.49
LMX1B-204ENST00000561065 LINC00299Q6ZSB3 139 aa11.97□□□□□ -0.49
LMX1B-204ENST00000561065 CENPSQ8N2Z9 138 aa11.97□□□□□ -0.49
LMX1B-204ENST00000561065 C20orf24Q9BUV8 137 aa11.97□□□□□ -0.49
LMX1B-204ENST00000561065 U3KQ87 197 aa11.97□□□□□ -0.49
LMX1B-204ENST00000561065 PLECQ15149 4684 aaKnown RBP11.96□□□□□ -0.49
LMX1B-204ENST00000561065 CTSGP08311 255 aa11.96□□□□□ -0.49
LMX1B-204ENST00000561065 C8orf88P0DMB2 117 aa11.96□□□□□ -0.49
LMX1B-204ENST00000561065 OPRK1P41145 380 aa11.96□□□□□ -0.49
LMX1B-204ENST00000561065 SPINK9Q5DT21 86 aa11.96□□□□□ -0.49
LMX1B-204ENST00000561065 RNASEH2CQ8TDP1 164 aaKnown RBP11.96□□□□□ -0.49
LMX1B-204ENST00000561065 TMEM190Q8WZ59 177 aa11.96□□□□□ -0.49
LMX1B-204ENST00000561065 TMEM230Q96A57 120 aa11.96□□□□□ -0.49
LMX1B-204ENST00000561065 FAM110AQ9BQ89 295 aa11.96□□□□□ -0.49
LMX1B-204ENST00000561065 SRD5A3Q9H8P0 318 aa11.96□□□□□ -0.49
LMX1B-204ENST00000561065 TMED3Q9Y3Q3 217 aa11.96□□□□□ -0.49
LMX1B-204ENST00000561065 ALMS1Q8TCU4 4167 aa11.96□□□□□ -0.5
LMX1B-204ENST00000561065 HYDINQ4G0P3 5121 aa11.95□□□□□ -0.5
LMX1B-204ENST00000561065 OR11H12B2RN74 326 aa11.95□□□□□ -0.5
LMX1B-204ENST00000561065 MED6O75586 246 aa11.95□□□□□ -0.5
LMX1B-204ENST00000561065 SCAF4O95104 1147 aaKnown RBP11.95□□□□□ -0.5
LMX1B-204ENST00000561065 SLC25A4P12235 298 aa11.95□□□□□ -0.5
LMX1B-204ENST00000561065 SLC25A6P12236 298 aa11.95□□□□□ -0.5
LMX1B-204ENST00000561065 ZFAND6Q6FIF0 208 aa11.95□□□□□ -0.5
LMX1B-204ENST00000561065 Q6ZRM9 215 aa11.95□□□□□ -0.5
LMX1B-204ENST00000561065 OR1S1Q8NH92 325 aa11.95□□□□□ -0.5
LMX1B-204ENST00000561065 LHFPL5Q8TAF8 219 aa11.95□□□□□ -0.5
LMX1B-204ENST00000561065 CHRDL1Q9BU40 450 aa11.95□□□□□ -0.5
LMX1B-204ENST00000561065 TRAV14DV4A0A0A6YYC5 116 aa11.94□□□□□ -0.5
LMX1B-204ENST00000561065 A0A0G2JRQ6 117 aa11.94□□□□□ -0.5
LMX1B-204ENST00000561065 IFNA10P01566 189 aa11.94□□□□□ -0.5
LMX1B-204ENST00000561065 RNASE2P10153 161 aaKnown RBP11.94□□□□□ -0.5
LMX1B-204ENST00000561065 LYL1P12980 280 aa11.94□□□□□ -0.5
LMX1B-204ENST00000561065 ADMP35318 185 aa11.94□□□□□ -0.5
LMX1B-204ENST00000561065 CMC4P56277 68 aaPredicted RBP11.94□□□□□ -0.5
LMX1B-204ENST00000561065 RPP30P78346 268 aaKnown RBP11.94□□□□□ -0.5
LMX1B-204ENST00000561065 C2orf83Q53S99 150 aa11.94□□□□□ -0.5
LMX1B-204ENST00000561065 LYZL2Q7Z4W2 148 aa11.94□□□□□ -0.5
LMX1B-204ENST00000561065 LRTM2Q8N967 370 aa11.94□□□□□ -0.5
LMX1B-204ENST00000561065 OR52B4Q8NGK2 314 aa11.94□□□□□ -0.5
LMX1B-204ENST00000561065 S100ZQ8WXG8 99 aa11.94□□□□□ -0.5
LMX1B-204ENST00000561065 NARS2Q96I59 477 aaKnown RBP11.94□□□□□ -0.5
LMX1B-204ENST00000561065 TMEM231Q9H6L2 316 aa11.94□□□□□ -0.5
LMX1B-204ENST00000561065 FAM90A26D6RGX4 464 aa11.93□□□□□ -0.5
LMX1B-204ENST00000561065 SUPT4H1P63272 117 aaKnown RBP11.93□□□□□ -0.5
LMX1B-204ENST00000561065 PAFAH1B2P68402 229 aa11.93□□□□□ -0.5
LMX1B-204ENST00000561065 TNFRSF9Q07011 255 aa11.93□□□□□ -0.5
LMX1B-204ENST00000561065 BAK1Q16611 211 aa11.93□□□□□ -0.5
LMX1B-204ENST00000561065 NMSQ5H8A3 153 aa11.93□□□□□ -0.5
LMX1B-204ENST00000561065 PVRIGQ6DKI7 326 aa11.93□□□□□ -0.5
LMX1B-204ENST00000561065 ZNF600Q6ZNG1 722 aa11.93□□□□□ -0.5
LMX1B-204ENST00000561065 SLC24A4Q8NFF2 622 aa11.93□□□□□ -0.5
LMX1B-204ENST00000561065 OR4X1Q8NH49 305 aa11.93□□□□□ -0.5
LMX1B-204ENST00000561065 CIB3Q96Q77 187 aaPredicted RBP11.93□□□□□ -0.5
LMX1B-204ENST00000561065 IGHV3OR16-8A0A075B7F1 116 aa11.92□□□□□ -0.5
LMX1B-204ENST00000561065 A0A1W2PS18 150 aa11.92□□□□□ -0.5
LMX1B-204ENST00000561065 NDUFB6O95139 128 aa11.92□□□□□ -0.5
LMX1B-204ENST00000561065 SFT2D2O95562 160 aa11.92□□□□□ -0.5
LMX1B-204ENST00000561065 TMEM50AO95807 157 aa11.92□□□□□ -0.5
LMX1B-204ENST00000561065 IFNA21P01568 189 aa11.92□□□□□ -0.5
LMX1B-204ENST00000561065 RAB11AP62491 216 aa11.92□□□□□ -0.5
LMX1B-204ENST00000561065 BSXQ3C1V8 233 aa11.92□□□□□ -0.5
LMX1B-204ENST00000561065 COQ8AQ8NI60 647 aa11.92□□□□□ -0.5
LMX1B-204ENST00000561065 SPAG8Q99932 426 aaPredicted RBP11.92□□□□□ -0.5
LMX1B-204ENST00000561065 HSPB7Q9UBY9 170 aa11.92□□□□□ -0.5
LMX1B-204ENST00000561065 OR4C46A6NHA9 309 aa11.91□□□□□ -0.5
LMX1B-204ENST00000561065 CLN5O75503 358 aa11.91□□□□□ -0.5
LMX1B-204ENST00000561065 NPY1RP25929 384 aa11.91□□□□□ -0.5
LMX1B-204ENST00000561065 TMEM116Q8NCL8 245 aa11.91□□□□□ -0.5
LMX1B-204ENST00000561065 DTD1Q8TEA8 209 aa11.91□□□□□ -0.5
LMX1B-204ENST00000561065 OR10C1Q96KK4 312 aa11.91□□□□□ -0.5
LMX1B-204ENST00000561065 SMPXQ9UHP9 88 aa11.91□□□□□ -0.5
LMX1B-204ENST00000561065 LINC00854A0A1B0GVQ3 168 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms