RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 C2orf70A6NJV1 201 aa11.76□□□□□ -0.53
RABGGTA-219ENST00000560871 OPRK1P41145 380 aa11.76□□□□□ -0.53
RABGGTA-219ENST00000560871 OR4D5Q8NGN0 318 aa11.76□□□□□ -0.53
RABGGTA-219ENST00000560871 RNASEH2CQ8TDP1 164 aaKnown RBP11.76□□□□□ -0.53
RABGGTA-219ENST00000560871 ZNF431Q8TF32 576 aaPredicted RBP11.76□□□□□ -0.53
RABGGTA-219ENST00000560871 GAR1Q9NY12 217 aaKnown RBP11.76□□□□□ -0.53
RABGGTA-219ENST00000560871 ZNF256Q9Y2P7 627 aaPredicted RBP11.76□□□□□ -0.53
RABGGTA-219ENST00000560871 IGHV3-35A0A0C4DH35 117 aa11.75□□□□□ -0.53
RABGGTA-219ENST00000560871 NDUFA4O00483 81 aa11.75□□□□□ -0.53
RABGGTA-219ENST00000560871 FAM106AQ4KMX7 169 aa11.75□□□□□ -0.53
RABGGTA-219ENST00000560871 CACNG8Q8WXS5 425 aa11.75□□□□□ -0.53
RABGGTA-219ENST00000560871 PRR25Q96S07 402 aa11.75□□□□□ -0.53
RABGGTA-219ENST00000560871 U3KQ87 197 aa11.75□□□□□ -0.53
RABGGTA-219ENST00000560871 IFNA21P01568 189 aa11.74□□□□□ -0.53
RABGGTA-219ENST00000560871 IL5P05113 134 aa11.74□□□□□ -0.53
RABGGTA-219ENST00000560871 IAPPP10997 89 aa11.74□□□□□ -0.53
RABGGTA-219ENST00000560871 SPNP16150 400 aa11.74□□□□□ -0.53
RABGGTA-219ENST00000560871 NPBWR1P48145 328 aa11.74□□□□□ -0.53
RABGGTA-219ENST00000560871 ELLP55199 621 aaPredicted RBP11.74□□□□□ -0.53
RABGGTA-219ENST00000560871 MLANAQ16655 118 aa11.74□□□□□ -0.53
RABGGTA-219ENST00000560871 OR4X1Q8NH49 305 aa11.74□□□□□ -0.53
RABGGTA-219ENST00000560871 OR10C1Q96KK4 312 aa11.74□□□□□ -0.53
RABGGTA-219ENST00000560871 RPS10-NUDT3A0A1W2PQS6 291 aa11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 ZNF320A2RRD8 509 aa11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 C15orf62A8K5M9 175 aa11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 CCSO14618 274 aa11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 NUPL2O15504 423 aaKnown RBP11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 SYNGR2O43760 224 aa11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 GNG7O60262 68 aa11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 CLN5O75503 358 aa11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 MED6O75586 246 aa11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 IFNA10P01566 189 aa11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 C8orf88P0DMB2 117 aa11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 FOLR2P14207 255 aa11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 ATP5IP56385 69 aaPredicted RBP11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 DEFA1P59665 94 aa11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 DEFA3P59666 94 aa11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 ID3Q02535 119 aa11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 DCTN2Q13561 401 aaKnown RBP11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 NOXA1Q86UR1 476 aa11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 B9D2Q9BPU9 175 aa11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 MAGT1Q9H0U3 335 aa11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 LSM4Q9Y4Z0 139 aaKnown RBP11.73□□□□□ -0.53
RABGGTA-219ENST00000560871 COL7A1Q02388 2944 aa11.72□□□□□ -0.53
RABGGTA-219ENST00000560871 TMEM50AO95807 157 aa11.72□□□□□ -0.53
RABGGTA-219ENST00000560871 GP9P14770 177 aa11.72□□□□□ -0.53
RABGGTA-219ENST00000560871 CBLN1P23435 193 aa11.72□□□□□ -0.53
RABGGTA-219ENST00000560871 NKX2-1P43699 371 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-219ENST00000560871 POLR2GP62487 172 aaKnown RBP eCLIP11.72□□□□□ -0.53
RABGGTA-219ENST00000560871 RELQ04864 619 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-219ENST00000560871 CD69Q07108 199 aa11.72□□□□□ -0.53
RABGGTA-219ENST00000560871 IAH1Q2TAA2 248 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-219ENST00000560871 TM4SF20Q53R12 229 aa11.72□□□□□ -0.53
RABGGTA-219ENST00000560871 PRSS54Q6PEW0 395 aa11.72□□□□□ -0.53
RABGGTA-219ENST00000560871 C12orf45Q8N5I9 185 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-219ENST00000560871 ZBTB8BQ8NAP8 495 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-219ENST00000560871 OR2K2Q8NGT1 345 aa11.72□□□□□ -0.53
RABGGTA-219ENST00000560871 CIB3Q96Q77 187 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-219ENST00000560871 MARVELD1Q9BSK0 173 aa11.72□□□□□ -0.53
RABGGTA-219ENST00000560871 PALMDQ9NP74 551 aa11.72□□□□□ -0.53
RABGGTA-219ENST00000560871 UFC1Q9Y3C8 167 aa11.72□□□□□ -0.53
RABGGTA-219ENST00000560871 IZUMO1RA6ND01 250 aa11.71□□□□□ -0.53
RABGGTA-219ENST00000560871 WRBO00258 174 aa11.71□□□□□ -0.53
RABGGTA-219ENST00000560871 SLC25A4P12235 298 aa11.71□□□□□ -0.53
RABGGTA-219ENST00000560871 DEFB114Q30KQ6 69 aa11.71□□□□□ -0.53
RABGGTA-219ENST00000560871 SLC16A13Q7RTY0 426 aa11.71□□□□□ -0.53
RABGGTA-219ENST00000560871 TMEM116Q8NCL8 245 aa11.71□□□□□ -0.53
RABGGTA-219ENST00000560871 MARC2Q969Z3 335 aa11.71□□□□□ -0.53
RABGGTA-219ENST00000560871 ZFAND3Q9H8U3 227 aa11.71□□□□□ -0.53
RABGGTA-219ENST00000560871 DAZ1Q9NQZ3 744 aaKnown RBP11.71□□□□□ -0.53
RABGGTA-219ENST00000560871 MLXQ9UH92 298 aa11.71□□□□□ -0.53
RABGGTA-219ENST00000560871 PRSS46E5RG02 174 aa11.7□□□□□ -0.54
RABGGTA-219ENST00000560871 INMT-MINDY4F8WBC2 141 aa11.7□□□□□ -0.54
RABGGTA-219ENST00000560871 K7EMT4 169 aa11.7□□□□□ -0.54
RABGGTA-219ENST00000560871 PRAF2O60831 178 aa11.7□□□□□ -0.54
RABGGTA-219ENST00000560871 LY86O95711 162 aa11.7□□□□□ -0.54
RABGGTA-219ENST00000560871 IGKV1-17P01599 117 aa11.7□□□□□ -0.54
RABGGTA-219ENST00000560871 IGLC1P0CG04 106 aa11.7□□□□□ -0.54
RABGGTA-219ENST00000560871 RND2P52198 227 aa11.7□□□□□ -0.54
RABGGTA-219ENST00000560871 CD300EQ496F6 205 aaPredicted RBP11.7□□□□□ -0.54
RABGGTA-219ENST00000560871 ETFRF1Q6IPR1 90 aa11.7□□□□□ -0.54
RABGGTA-219ENST00000560871 LCN12Q6JVE5 192 aa11.7□□□□□ -0.54
RABGGTA-219ENST00000560871 ZNF600Q6ZNG1 722 aa11.7□□□□□ -0.54
RABGGTA-219ENST00000560871 UXS1Q8NBZ7 420 aa11.7□□□□□ -0.54
RABGGTA-219ENST00000560871 DYNLRB2Q8TF09 96 aa11.7□□□□□ -0.54
RABGGTA-219ENST00000560871 TECRQ9NZ01 308 aaKnown RBP11.7□□□□□ -0.54
RABGGTA-219ENST00000560871 MRPL27Q9P0M9 148 aaKnown RBP11.7□□□□□ -0.54
RABGGTA-219ENST00000560871 RCL1Q9Y2P8 373 aaKnown RBP11.7□□□□□ -0.54
RABGGTA-219ENST00000560871 IGHV3OR16-8A0A075B7F1 116 aa11.69□□□□□ -0.54
RABGGTA-219ENST00000560871 SNRPGP15A8MWD9 76 aa11.69□□□□□ -0.54
RABGGTA-219ENST00000560871 H3BP45 60 aa11.69□□□□□ -0.54
RABGGTA-219ENST00000560871 SSSCA1O60232 199 aa11.69□□□□□ -0.54
RABGGTA-219ENST00000560871 IFNA4P05014 189 aa11.69□□□□□ -0.54
RABGGTA-219ENST00000560871 BTNL8Q6UX41 500 aa11.69□□□□□ -0.54
RABGGTA-219ENST00000560871 TOMM20LQ6UXN7 152 aa11.69□□□□□ -0.54
RABGGTA-219ENST00000560871 C20orf24Q9BUV8 137 aa11.69□□□□□ -0.54
RABGGTA-219ENST00000560871 HUWE1Q7Z6Z7 4374 aaKnown RBP11.69□□□□□ -0.54
RABGGTA-219ENST00000560871 SCGB1D2O95969 90 aa11.68□□□□□ -0.54
RABGGTA-219ENST00000560871 GPX4P36969 197 aaPredicted RBP11.68□□□□□ -0.54
RABGGTA-219ENST00000560871 PAX9P55771 341 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms