RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 NDUFA6P56556 154 aa7.8□□□□□ -1.16
RTF1-206ENST00000560447 TAS2R60P59551 318 aa7.8□□□□□ -1.16
RTF1-206ENST00000560447 SPATA31B1PQ5VZV4 182 aa7.8□□□□□ -1.16
RTF1-206ENST00000560447 TEX38Q6PEX7 206 aa7.8□□□□□ -1.16
RTF1-206ENST00000560447 PPP1R27Q86WC6 154 aa7.8□□□□□ -1.16
RTF1-206ENST00000560447 TMEM116Q8NCL8 245 aa7.8□□□□□ -1.16
RTF1-206ENST00000560447 OR10G8Q8NGN5 311 aa7.8□□□□□ -1.16
RTF1-206ENST00000560447 FRZBQ92765 325 aa7.8□□□□□ -1.16
RTF1-206ENST00000560447 BSNQ9UPA5 3926 aa7.8□□□□□ -1.16
RTF1-206ENST00000560447 SPENQ96T58 3664 aaKnown RBP7.8□□□□□ -1.16
RTF1-206ENST00000560447 CFAP47Q6ZTR5 3102 aa7.8□□□□□ -1.16
RTF1-206ENST00000560447 MGAQ8IWI9 3026 aa7.79□□□□□ -1.16
RTF1-206ENST00000560447 TRBV9A0A0B4J1U6 114 aa7.79□□□□□ -1.16
RTF1-206ENST00000560447 ENSAO43768 121 aaKnown RBP7.79□□□□□ -1.16
RTF1-206ENST00000560447 COX7A2P2O60397 106 aa7.79□□□□□ -1.16
RTF1-206ENST00000560447 OR7C2O60412 319 aa7.79□□□□□ -1.16
RTF1-206ENST00000560447 FABP1P07148 127 aa7.79□□□□□ -1.16
RTF1-206ENST00000560447 PRTN3P24158 256 aa7.79□□□□□ -1.16
RTF1-206ENST00000560447 HTR1DP28221 377 aa7.79□□□□□ -1.16
RTF1-206ENST00000560447 PDLIM4P50479 330 aa7.79□□□□□ -1.16
RTF1-206ENST00000560447 DIAPH2-AS1Q14236 149 aa7.79□□□□□ -1.16
RTF1-206ENST00000560447 ACTL10Q5JWF8 245 aa7.79□□□□□ -1.16
RTF1-206ENST00000560447 C10orf113Q5VZT2 155 aa7.79□□□□□ -1.16
RTF1-206ENST00000560447 MOB3BQ86TA1 216 aa7.79□□□□□ -1.16
RTF1-206ENST00000560447 HIST3H2BBQ8N257 126 aa7.79□□□□□ -1.16
RTF1-206ENST00000560447 OR4X1Q8NH49 305 aa7.79□□□□□ -1.16
RTF1-206ENST00000560447 SMIM12Q96EX1 92 aa7.79□□□□□ -1.16
RTF1-206ENST00000560447 PERPQ96FX8 193 aa7.79□□□□□ -1.16
RTF1-206ENST00000560447 EAF1Q96JC9 268 aaPredicted RBP7.79□□□□□ -1.16
RTF1-206ENST00000560447 FAM167A-AS1Q96KT0 104 aa7.79□□□□□ -1.16
RTF1-206ENST00000560447 FNDC4Q9H6D8 234 aaPredicted RBP7.79□□□□□ -1.16
RTF1-206ENST00000560447 OSTCQ9NRP0 149 aa7.79□□□□□ -1.16
RTF1-206ENST00000560447 DPM3Q9P2X0 92 aa7.79□□□□□ -1.16
RTF1-206ENST00000560447 F11RQ9Y624 299 aaKnown RBP7.79□□□□□ -1.16
RTF1-206ENST00000560447 PCNX1Q96RV3 2341 aa7.79□□□□□ -1.16
RTF1-206ENST00000560447 TRBV20OR9-2A0A075B6H5 130 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 IGKV1D-37A0A075B6S9 117 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 A0A1W2PPQ1 181 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 HELTA6NFD8 242 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 ODF3BA8MYP8 253 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 E7EUB6 86 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 NDUFA3O95167 84 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 GRNP28799 593 aaKnown RBP7.78□□□□□ -1.16
RTF1-206ENST00000560447 GPR6P46095 362 aaPredicted RBP7.78□□□□□ -1.16
RTF1-206ENST00000560447 TNXAQ16473 311 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 TIGITQ495A1 244 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 TPTE2P1Q5T6R2 138 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 MINOS1Q5TGZ0 78 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 CCDC144NLQ6NUI1 221 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 TMEM183AQ8IXX5 376 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 NPBQ8NG41 125 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 OCC1Q8TAD7 63 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 TMEM37Q8WXS4 190 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 NPIPB3Q92617 1050 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 ZNF503Q96F45 646 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 CHRDL1Q9BU40 450 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 OR51M1Q9H341 326 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 PRORYQ9H606 182 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 IL36BQ9NZH7 164 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 MINOS1-NBL1R4GNA1 71 aa7.78□□□□□ -1.16
RTF1-206ENST00000560447 PTPRZ1P23471 2315 aaPredicted RBP7.78□□□□□ -1.16
RTF1-206ENST00000560447 FOXH1O75593 365 aa7.77□□□□□ -1.17
RTF1-206ENST00000560447 GNG4P50150 75 aa7.77□□□□□ -1.17
RTF1-206ENST00000560447 YPEL3P61236 119 aaPredicted RBP7.77□□□□□ -1.17
RTF1-206ENST00000560447 UBE2L3P68036 154 aaKnown RBP7.77□□□□□ -1.17
RTF1-206ENST00000560447 S100A7AQ86SG5 101 aa7.77□□□□□ -1.17
RTF1-206ENST00000560447 OR5AU1Q8NGC0 362 aa7.77□□□□□ -1.17
RTF1-206ENST00000560447 OR2T6Q8NHC8 308 aa7.77□□□□□ -1.17
RTF1-206ENST00000560447 PAXXQ9BUH6 204 aa7.77□□□□□ -1.17
RTF1-206ENST00000560447 DERL1Q9BUN8 251 aa7.77□□□□□ -1.17
RTF1-206ENST00000560447 SSBP3Q9BWW4 388 aaPredicted RBP7.77□□□□□ -1.17
RTF1-206ENST00000560447 SLC25A2Q9BXI2 301 aa7.77□□□□□ -1.17
RTF1-206ENST00000560447 TNFRSF19Q9NS68 423 aa7.77□□□□□ -1.17
RTF1-206ENST00000560447 CDC42EP3Q9UKI2 254 aa7.77□□□□□ -1.17
RTF1-206ENST00000560447 MALRD1Q5VYJ5 2156 aa7.77□□□□□ -1.17
RTF1-206ENST00000560447 MAP1BP46821 2468 aaKnown RBP7.76□□□□□ -1.17
RTF1-206ENST00000560447 ANKHD1Q8IWZ3 2542 aaKnown RBP7.76□□□□□ -1.17
RTF1-206ENST00000560447 TLN1Q9Y490 2541 aaKnown RBP7.76□□□□□ -1.17
RTF1-206ENST00000560447 LOC105371242A0A075B767 164 aa7.76□□□□□ -1.17
RTF1-206ENST00000560447 A6NNC1 897 aa7.76□□□□□ -1.17
RTF1-206ENST00000560447 TEX22C9J3V5 150 aa7.76□□□□□ -1.17
RTF1-206ENST00000560447 C22orf46C9J442 243 aa7.76□□□□□ -1.17
RTF1-206ENST00000560447 LYNX1G3V0Z9 82 aa7.76□□□□□ -1.17
RTF1-206ENST00000560447 ISLRO14498 428 aa7.76□□□□□ -1.17
RTF1-206ENST00000560447 GCGP01275 180 aa7.76□□□□□ -1.17
RTF1-206ENST00000560447 MT-ND6P03923 174 aa7.76□□□□□ -1.17
RTF1-206ENST00000560447 LYNX1P0DP58 116 aa7.76□□□□□ -1.17
RTF1-206ENST00000560447 CNN1P51911 297 aaKnown RBP7.76□□□□□ -1.17
RTF1-206ENST00000560447 RPL15P61313 204 aaKnown RBP7.76□□□□□ -1.17
RTF1-206ENST00000560447 C10orf55Q5SWW7 151 aa7.76□□□□□ -1.17
RTF1-206ENST00000560447 FAM231DQ6ZW35 169 aa7.76□□□□□ -1.17
RTF1-206ENST00000560447 NECAP1Q8NC96 275 aa7.76□□□□□ -1.17
RTF1-206ENST00000560447 SGMS2Q8NHU3 365 aa7.76□□□□□ -1.17
RTF1-206ENST00000560447 SRSF12Q8WXF0 261 aaKnown RBP7.76□□□□□ -1.17
RTF1-206ENST00000560447 CFHR4Q92496 578 aa7.76□□□□□ -1.17
RTF1-206ENST00000560447 ZNF48Q96MX3 618 aaPredicted RBP7.76□□□□□ -1.17
RTF1-206ENST00000560447 ELOVL1Q9BW60 279 aa7.76□□□□□ -1.17
RTF1-206ENST00000560447 TPSG1Q9NRR2 321 aa7.76□□□□□ -1.17
RTF1-206ENST00000560447 ZNF355PQ9NSJ1 428 aa7.76□□□□□ -1.17
RTF1-206ENST00000560447 ONECUT1Q9UBC0 465 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms