RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 PINX1Q96BK5 328 aaKnown RBP11.39□□□□□ -0.59
SNRPA1-210ENST00000560383 OR10C1Q96KK4 312 aa11.39□□□□□ -0.59
SNRPA1-210ENST00000560383 SDHCQ99643 169 aaPredicted RBP11.39□□□□□ -0.59
SNRPA1-210ENST00000560383 NEURL2Q9BR09 285 aa11.39□□□□□ -0.59
SNRPA1-210ENST00000560383 EDA2RQ9HAV5 297 aa11.39□□□□□ -0.59
SNRPA1-210ENST00000560383 DUXBA0A1W2PPF3 345 aa11.38□□□□□ -0.59
SNRPA1-210ENST00000560383 IGHV3-48P01763 117 aa11.38□□□□□ -0.59
SNRPA1-210ENST00000560383 CD7P09564 240 aa11.38□□□□□ -0.59
SNRPA1-210ENST00000560383 HTR2BP41595 481 aa11.38□□□□□ -0.59
SNRPA1-210ENST00000560383 NPBWR1P48145 328 aa11.38□□□□□ -0.59
SNRPA1-210ENST00000560383 CCR6P51684 374 aa11.38□□□□□ -0.59
SNRPA1-210ENST00000560383 GUCA2BQ16661 112 aa11.38□□□□□ -0.59
SNRPA1-210ENST00000560383 C2orf83Q53S99 150 aa11.38□□□□□ -0.59
SNRPA1-210ENST00000560383 LINC00322Q6ZN03 302 aaPredicted RBP11.38□□□□□ -0.59
SNRPA1-210ENST00000560383 LYZL2Q7Z4W2 148 aa11.38□□□□□ -0.59
SNRPA1-210ENST00000560383 TMED4Q7Z7H5 227 aa11.38□□□□□ -0.59
SNRPA1-210ENST00000560383 LRTM2Q8N967 370 aa11.38□□□□□ -0.59
SNRPA1-210ENST00000560383 DUSP18Q8NEJ0 188 aa11.38□□□□□ -0.59
SNRPA1-210ENST00000560383 FNDC4Q9H6D8 234 aaPredicted RBP11.38□□□□□ -0.59
SNRPA1-210ENST00000560383 PLA2G2EQ9NZK7 142 aa11.38□□□□□ -0.59
SNRPA1-210ENST00000560383 NAP1L6A6NFF2 107 aa11.37□□□□□ -0.59
SNRPA1-210ENST00000560383 GNG7O60262 68 aa11.37□□□□□ -0.59
SNRPA1-210ENST00000560383 SMCO1Q147U7 214 aa11.37□□□□□ -0.59
SNRPA1-210ENST00000560383 RBMS2Q15434 407 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-210ENST00000560383 HAGHQ16775 308 aa11.37□□□□□ -0.59
SNRPA1-210ENST00000560383 TUBA4BQ9H853 241 aa11.37□□□□□ -0.59
SNRPA1-210ENST00000560383 HEYLQ9NQ87 328 aaPredicted RBP11.37□□□□□ -0.59
SNRPA1-210ENST00000560383 HSPB7Q9UBY9 170 aa11.37□□□□□ -0.59
SNRPA1-210ENST00000560383 TENM2Q9NT68 2774 aa11.36□□□□□ -0.59
SNRPA1-210ENST00000560383 A0A1B0GU03 582 aa11.36□□□□□ -0.59
SNRPA1-210ENST00000560383 TSPAN4O14817 238 aa11.36□□□□□ -0.59
SNRPA1-210ENST00000560383 TMEM50AO95807 157 aa11.36□□□□□ -0.59
SNRPA1-210ENST00000560383 TNFRSF9Q07011 255 aa11.36□□□□□ -0.59
SNRPA1-210ENST00000560383 ANKRD55Q3KP44 614 aa11.36□□□□□ -0.59
SNRPA1-210ENST00000560383 TRIQKQ629K1 86 aa11.36□□□□□ -0.59
SNRPA1-210ENST00000560383 OR4X1Q8NH49 305 aa11.36□□□□□ -0.59
SNRPA1-210ENST00000560383 TMEM170AQ8WVE7 144 aa11.36□□□□□ -0.59
SNRPA1-210ENST00000560383 SPAG8Q99932 426 aaPredicted RBP11.36□□□□□ -0.59
SNRPA1-210ENST00000560383 C20orf24Q9BUV8 137 aa11.36□□□□□ -0.59
SNRPA1-210ENST00000560383 MRPL36Q9P0J6 103 aaKnown RBP11.36□□□□□ -0.59
SNRPA1-210ENST00000560383 SMPXQ9UHP9 88 aa11.36□□□□□ -0.59
SNRPA1-210ENST00000560383 CEBPZOSA8MTT3 80 aa11.35□□□□□ -0.59
SNRPA1-210ENST00000560383 PITX3O75364 302 aa11.35□□□□□ -0.59
SNRPA1-210ENST00000560383 CLN5O75503 358 aa11.35□□□□□ -0.59
SNRPA1-210ENST00000560383 SCAF4O95104 1147 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-210ENST00000560383 NDUFB6O95139 128 aa11.35□□□□□ -0.59
SNRPA1-210ENST00000560383 SLC25A6P12236 298 aa11.35□□□□□ -0.59
SNRPA1-210ENST00000560383 UBE2MP61081 183 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-210ENST00000560383 PPP1R1AQ13522 171 aa11.35□□□□□ -0.59
SNRPA1-210ENST00000560383 RBPMS2Q6ZRY4 209 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-210ENST00000560383 SLC16A13Q7RTY0 426 aa11.35□□□□□ -0.59
SNRPA1-210ENST00000560383 CENPSQ8N2Z9 138 aa11.35□□□□□ -0.59
SNRPA1-210ENST00000560383 SLC24A4Q8NFF2 622 aa11.35□□□□□ -0.59
SNRPA1-210ENST00000560383 RNASEH2CQ8TDP1 164 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-210ENST00000560383 SELENOKQ9Y6D0 94 aa11.35□□□□□ -0.59
SNRPA1-210ENST00000560383 DNAH1Q9P2D7 4330 aa11.34□□□□□ -0.59
SNRPA1-210ENST00000560383 IGHV3OR16-8A0A075B7F1 116 aa11.34□□□□□ -0.59
SNRPA1-210ENST00000560383 IGHV7-4-1A0A0J9YVY3 117 aa11.34□□□□□ -0.59
SNRPA1-210ENST00000560383 OR11H12B2RN74 326 aa11.34□□□□□ -0.59
SNRPA1-210ENST00000560383 SFT2D2O95562 160 aa11.34□□□□□ -0.59
SNRPA1-210ENST00000560383 VAMP1P23763 118 aa11.34□□□□□ -0.59
SNRPA1-210ENST00000560383 OPRK1P41145 380 aa11.34□□□□□ -0.59
SNRPA1-210ENST00000560383 MLANAQ16655 118 aa11.34□□□□□ -0.59
SNRPA1-210ENST00000560383 LAMTOR1Q6IAA8 161 aa11.34□□□□□ -0.59
SNRPA1-210ENST00000560383 TOMM20LQ6UXN7 152 aa11.34□□□□□ -0.59
SNRPA1-210ENST00000560383 ZNF600Q6ZNG1 722 aa11.34□□□□□ -0.59
SNRPA1-210ENST00000560383 LINC00299Q6ZSB3 139 aa11.34□□□□□ -0.59
SNRPA1-210ENST00000560383 NOXA1Q86UR1 476 aa11.34□□□□□ -0.59
SNRPA1-210ENST00000560383 DEFB125Q8N687 156 aa11.34□□□□□ -0.59
SNRPA1-210ENST00000560383 OR52B4Q8NGK2 314 aa11.34□□□□□ -0.59
SNRPA1-210ENST00000560383 C7orf50Q9BRJ6 194 aaKnown RBP11.34□□□□□ -0.59
SNRPA1-210ENST00000560383 HIPK2Q9H2X6 1198 aa11.34□□□□□ -0.59
SNRPA1-210ENST00000560383 ZFAND3Q9H8U3 227 aa11.34□□□□□ -0.59
SNRPA1-210ENST00000560383 TMED3Q9Y3Q3 217 aa11.34□□□□□ -0.59
SNRPA1-210ENST00000560383 U3KQ87 197 aa11.34□□□□□ -0.59
SNRPA1-210ENST00000560383 TRAV14DV4A0A0A6YYC5 116 aa11.33□□□□□ -0.6
SNRPA1-210ENST00000560383 LCE6AA0A183 80 aa11.33□□□□□ -0.6
SNRPA1-210ENST00000560383 RPS10-NUDT3A0A1W2PQS6 291 aa11.33□□□□□ -0.6
SNRPA1-210ENST00000560383 CHEK1O14757 476 aa11.33□□□□□ -0.6
SNRPA1-210ENST00000560383 ZNF207O43670 478 aaKnown RBP11.33□□□□□ -0.6
SNRPA1-210ENST00000560383 YIF1AO95070 293 aa11.33□□□□□ -0.6
SNRPA1-210ENST00000560383 IGKV1-17P01599 117 aa11.33□□□□□ -0.6
SNRPA1-210ENST00000560383 SLC25A4P12235 298 aa11.33□□□□□ -0.6
SNRPA1-210ENST00000560383 IL7P13232 177 aa11.33□□□□□ -0.6
SNRPA1-210ENST00000560383 BTCP35070 178 aa11.33□□□□□ -0.6
SNRPA1-210ENST00000560383 INPP1P49441 399 aa11.33□□□□□ -0.6
SNRPA1-210ENST00000560383 ATP5IP56385 69 aaPredicted RBP11.33□□□□□ -0.6
SNRPA1-210ENST00000560383 TMEM116Q8NCL8 245 aa11.33□□□□□ -0.6
SNRPA1-210ENST00000560383 WFDC10AQ9H1F0 79 aa11.33□□□□□ -0.6
SNRPA1-210ENST00000560383 TRAV30A0A087WSZ9 112 aa11.32□□□□□ -0.6
SNRPA1-210ENST00000560383 RBMY1BA6NDE4 496 aaKnown RBP11.32□□□□□ -0.6
SNRPA1-210ENST00000560383 RBMY1EA6NEQ0 496 aaKnown RBP11.32□□□□□ -0.6
SNRPA1-210ENST00000560383 NXPH3O95157 252 aa11.32□□□□□ -0.6
SNRPA1-210ENST00000560383 RBMY1DP0C7P1 496 aaKnown RBP11.32□□□□□ -0.6
SNRPA1-210ENST00000560383 NPY1RP25929 384 aa11.32□□□□□ -0.6
SNRPA1-210ENST00000560383 PRSS54Q6PEW0 395 aa11.32□□□□□ -0.6
SNRPA1-210ENST00000560383 DTD1Q8TEA8 209 aa11.32□□□□□ -0.6
SNRPA1-210ENST00000560383 RNF2Q99496 336 aa11.32□□□□□ -0.6
SNRPA1-210ENST00000560383 FAM110AQ9BQ89 295 aa11.32□□□□□ -0.6
SNRPA1-210ENST00000560383 GINS3Q9BRX5 216 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms