RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 ST8SIA2Q92186 375 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 HSPB9Q9BQS6 159 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 KCNIP2Q9NS61 270 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 GAR1Q9NY12 217 aaKnown RBP5.07□□□□□ -1.6
SPG11-221ENST00000560299 FBXO7Q9Y3I1 522 aa5.07□□□□□ -1.6
SPG11-221ENST00000560299 TENM1Q9UKZ4 2725 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 TRAV30A0A087WSZ9 112 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 A0A1B0GUS0 222 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 UBE2L5PA0A1B0GUS4 154 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 DNAJC9-AS1A6NH13 148 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 FABP1P07148 127 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 RNASE1P07998 156 aaKnown RBP5.06□□□□□ -1.6
SPG11-221ENST00000560299 SEC11BP0C7V7 166 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 FGF7P21781 194 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 NPBWR1P48145 328 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 RAB5CP51148 216 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 RAB14P61106 215 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 SERF2P84101 59 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 NDPQ00604 133 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 ARL16Q0P5N6 197 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 VWC2Q2TAL6 325 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 PVRIGQ6DKI7 326 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 BTNL8Q6UX41 500 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 SLC16A13Q7RTY0 426 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 TMEM144Q7Z5S9 345 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 HAPLN4Q86UW8 402 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 HSD17B11Q8NBQ5 300 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 NECAP1Q8NC96 275 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 OR2T6Q8NHC8 308 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 LRRC20Q8TCA0 184 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 TAF15Q92804 592 aaKnown RBP eCLIP5.06□□□□□ -1.6
SPG11-221ENST00000560299 BSCL2Q96G97 398 aaPredicted RBP5.06□□□□□ -1.6
SPG11-221ENST00000560299 CXorf58Q96LI9 332 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 GINS3Q9BRX5 216 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 WFDC1Q9HC57 220 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 CYTL1Q9NRR1 136 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 UBQLN2Q9UHD9 624 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 DNHD1Q96M86 4753 aa5.06□□□□□ -1.6
SPG11-221ENST00000560299 IGLV11-55A0A075B6I3 123 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 A0A0G2JLM5 398 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 TMEM89A2RUT3 159 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 SH2D7A6NKC9 451 aaPredicted RBP5.05□□□□□ -1.6
SPG11-221ENST00000560299 FAM223BA6NKX1 122 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 LINC01548A6NM66 108 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 UMAD1C9J7I0 102 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 PRSS46E5RG02 174 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 G3V318 75 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 BRI3O95415 125 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 MT-CO2P00403 227 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 MBP02144 154 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 SPP1P10451 314 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 ATP6V0CP27449 155 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 MFAP4P55083 255 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 SELENOTP62341 195 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 GAMTQ14353 236 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 FAM209BQ5JX69 171 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 AKR1C8PQ5T2L2 129 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 ASPHD1Q5U4P2 390 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 ACSM6Q6P461 480 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 Q71RC1 249 aaPredicted RBP5.05□□□□□ -1.6
SPG11-221ENST00000560299 FAM223AQ8IWN6 122 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 COMMD1Q8N668 190 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 TMEM116Q8NCL8 245 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 ZNF680Q8NEM1 530 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 OR2G3Q8NGZ4 309 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 VN1R17PQ8TDU5 208 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 SCARB1Q8WTV0 552 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 RNF141Q8WVD5 230 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 TMEM170AQ8WVE7 144 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 ACY3Q96HD9 319 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 USMG5Q96IX5 58 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 DUX5Q96PT3 197 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 TXN2Q99757 166 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 PSMG3Q9BT73 122 aaPredicted RBP5.05□□□□□ -1.6
SPG11-221ENST00000560299 WDR61Q9GZS3 305 aaKnown RBP5.05□□□□□ -1.6
SPG11-221ENST00000560299 ARV1Q9H2C2 271 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 SLC25A32Q9H2D1 315 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 FBXL7Q9UJT9 491 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 WDR83OSQ9Y284 106 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 TIMM9Q9Y5J7 89 aa5.05□□□□□ -1.6
SPG11-221ENST00000560299 CUBNO60494 3623 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 ANK2Q01484 3957 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 TRBV7-1A0A0A6YYK4 115 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 TRBV9A0A0B4J1U6 114 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 PSMB11A5LHX3 300 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 ZFP92A6NM28 416 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 I3L2K1 104 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 GNG7O60262 68 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 OR2J3O76001 311 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 CFDP00746 253 aaPredicted RBP5.04□□□□□ -1.6
SPG11-221ENST00000560299 TRGV3P03979 118 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 S100A7P31151 101 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 CAMLGP49069 296 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 RND2P52198 227 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 MFAP2P55001 183 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 BLOC1S1P78537 153 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 RHOGP84095 191 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 ATP5G2Q06055 141 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 KLK9Q2XQG4 91 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 C15orf32Q32M92 178 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms