RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 HOXA1P49639 335 aaPredicted RBP9.89□□□□□ -0.83
SMAD3-213ENST00000560175 CD81P60033 236 aa9.89□□□□□ -0.83
SMAD3-213ENST00000560175 UBE2MP61081 183 aaKnown RBP9.89□□□□□ -0.83
SMAD3-213ENST00000560175 TNFRSF9Q07011 255 aa9.89□□□□□ -0.83
SMAD3-213ENST00000560175 SMCO1Q147U7 214 aa9.89□□□□□ -0.83
SMAD3-213ENST00000560175 RBMS2Q15434 407 aaKnown RBP9.89□□□□□ -0.83
SMAD3-213ENST00000560175 MLANAQ16655 118 aa9.89□□□□□ -0.83
SMAD3-213ENST00000560175 HAGHQ16775 308 aa9.89□□□□□ -0.83
SMAD3-213ENST00000560175 LINC00299Q6ZSB3 139 aa9.89□□□□□ -0.83
SMAD3-213ENST00000560175 PINX1Q96BK5 328 aaKnown RBP9.89□□□□□ -0.83
SMAD3-213ENST00000560175 ENY2Q9NPA8 101 aa9.89□□□□□ -0.83
SMAD3-213ENST00000560175 MRPL36Q9P0J6 103 aaKnown RBP9.89□□□□□ -0.83
SMAD3-213ENST00000560175 SMPXQ9UHP9 88 aa9.89□□□□□ -0.83
SMAD3-213ENST00000560175 OR11H12B2RN74 326 aa9.88□□□□□ -0.83
SMAD3-213ENST00000560175 GNG7O60262 68 aa9.88□□□□□ -0.83
SMAD3-213ENST00000560175 CLN5O75503 358 aa9.88□□□□□ -0.83
SMAD3-213ENST00000560175 SFT2D2O95562 160 aa9.88□□□□□ -0.83
SMAD3-213ENST00000560175 ATP5IP56385 69 aaPredicted RBP9.88□□□□□ -0.83
SMAD3-213ENST00000560175 GUCA2BQ16661 112 aa9.88□□□□□ -0.83
SMAD3-213ENST00000560175 ANKRD55Q3KP44 614 aa9.88□□□□□ -0.83
SMAD3-213ENST00000560175 FAM90A2PQ658T7 463 aa9.88□□□□□ -0.83
SMAD3-213ENST00000560175 TOMM20LQ6UXN7 152 aa9.88□□□□□ -0.83
SMAD3-213ENST00000560175 TMEM116Q8NCL8 245 aa9.88□□□□□ -0.83
SMAD3-213ENST00000560175 RNASEH2CQ8TDP1 164 aaKnown RBP9.88□□□□□ -0.83
SMAD3-213ENST00000560175 SPAG8Q99932 426 aaPredicted RBP9.88□□□□□ -0.83
SMAD3-213ENST00000560175 ZFAND3Q9H8U3 227 aa9.88□□□□□ -0.83
SMAD3-213ENST00000560175 HEYLQ9NQ87 328 aaPredicted RBP9.88□□□□□ -0.83
SMAD3-213ENST00000560175 IGHV7-4-1A0A0J9YVY3 117 aa9.87□□□□□ -0.83
SMAD3-213ENST00000560175 RBMY1BA6NDE4 496 aaKnown RBP9.87□□□□□ -0.83
SMAD3-213ENST00000560175 RBMY1EA6NEQ0 496 aaKnown RBP9.87□□□□□ -0.83
SMAD3-213ENST00000560175 CHEK1O14757 476 aa9.87□□□□□ -0.83
SMAD3-213ENST00000560175 NDUFB6O95139 128 aa9.87□□□□□ -0.83
SMAD3-213ENST00000560175 IGKV1-17P01599 117 aa9.87□□□□□ -0.83
SMAD3-213ENST00000560175 RBMY1DP0C7P1 496 aaKnown RBP9.87□□□□□ -0.83
SMAD3-213ENST00000560175 BTCP35070 178 aa9.87□□□□□ -0.83
SMAD3-213ENST00000560175 PPP1R1AQ13522 171 aa9.87□□□□□ -0.83
SMAD3-213ENST00000560175 ZNF600Q6ZNG1 722 aa9.87□□□□□ -0.83
SMAD3-213ENST00000560175 TMED4Q7Z7H5 227 aa9.87□□□□□ -0.83
SMAD3-213ENST00000560175 RCHY1Q96PM5 261 aa9.87□□□□□ -0.83
SMAD3-213ENST00000560175 FAM110AQ9BQ89 295 aa9.87□□□□□ -0.83
SMAD3-213ENST00000560175 C7orf50Q9BRJ6 194 aaKnown RBP9.87□□□□□ -0.83
SMAD3-213ENST00000560175 VSIRQ9H7M9 311 aa9.87□□□□□ -0.83
SMAD3-213ENST00000560175 TUBA4BQ9H853 241 aa9.87□□□□□ -0.83
SMAD3-213ENST00000560175 ZMAT4Q9H898 229 aa9.87□□□□□ -0.83
SMAD3-213ENST00000560175 U3KQ87 197 aa9.87□□□□□ -0.83
SMAD3-213ENST00000560175 TRAV30A0A087WSZ9 112 aa9.86□□□□□ -0.83
SMAD3-213ENST00000560175 TRAV14DV4A0A0A6YYC5 116 aa9.86□□□□□ -0.83
SMAD3-213ENST00000560175 SCAF4O95104 1147 aaKnown RBP9.86□□□□□ -0.83
SMAD3-213ENST00000560175 IL7P13232 177 aa9.86□□□□□ -0.83
SMAD3-213ENST00000560175 OPRK1P41145 380 aa9.86□□□□□ -0.83
SMAD3-213ENST00000560175 LAMTOR1Q6IAA8 161 aa9.86□□□□□ -0.83
SMAD3-213ENST00000560175 PRSS54Q6PEW0 395 aa9.86□□□□□ -0.83
SMAD3-213ENST00000560175 RBPMS2Q6ZRY4 209 aaKnown RBP9.86□□□□□ -0.83
SMAD3-213ENST00000560175 SLC16A13Q7RTY0 426 aa9.86□□□□□ -0.83
SMAD3-213ENST00000560175 NOXA1Q86UR1 476 aa9.86□□□□□ -0.83
SMAD3-213ENST00000560175 CENPSQ8N2Z9 138 aa9.86□□□□□ -0.83
SMAD3-213ENST00000560175 DEFB125Q8N687 156 aa9.86□□□□□ -0.83
SMAD3-213ENST00000560175 SLC24A4Q8NFF2 622 aa9.86□□□□□ -0.83
SMAD3-213ENST00000560175 OR52B4Q8NGK2 314 aa9.86□□□□□ -0.83
SMAD3-213ENST00000560175 C20orf24Q9BUV8 137 aa9.86□□□□□ -0.83
SMAD3-213ENST00000560175 RHPN1-AS1Q9BWJ2 59 aa9.86□□□□□ -0.83
SMAD3-213ENST00000560175 HIPK2Q9H2X6 1198 aa9.86□□□□□ -0.83
SMAD3-213ENST00000560175 TMED3Q9Y3Q3 217 aa9.86□□□□□ -0.83
SMAD3-213ENST00000560175 SELENOKQ9Y6D0 94 aa9.86□□□□□ -0.83
SMAD3-213ENST00000560175 CSMD3Q7Z407 3707 aa9.85□□□□□ -0.83
SMAD3-213ENST00000560175 IGHV3OR16-8A0A075B7F1 116 aa9.85□□□□□ -0.83
SMAD3-213ENST00000560175 RPS10-NUDT3A0A1W2PQS6 291 aa9.85□□□□□ -0.83
SMAD3-213ENST00000560175 A6NHS1 94 aa9.85□□□□□ -0.83
SMAD3-213ENST00000560175 CEBPZOSA8MTT3 80 aa9.85□□□□□ -0.83
SMAD3-213ENST00000560175 FAM90A26D6RGX4 464 aa9.85□□□□□ -0.83
SMAD3-213ENST00000560175 PLA2G10O15496 165 aa9.85□□□□□ -0.83
SMAD3-213ENST00000560175 ZNF207O43670 478 aaKnown RBP9.85□□□□□ -0.83
SMAD3-213ENST00000560175 SLC25A4P12235 298 aa9.85□□□□□ -0.83
SMAD3-213ENST00000560175 CNPY1Q3B7I2 92 aa9.85□□□□□ -0.83
SMAD3-213ENST00000560175 TRIQKQ629K1 86 aa9.85□□□□□ -0.83
SMAD3-213ENST00000560175 RNF2Q99496 336 aa9.85□□□□□ -0.83
SMAD3-213ENST00000560175 WFDC10AQ9H1F0 79 aa9.85□□□□□ -0.83
SMAD3-213ENST00000560175 RBKSQ9H477 322 aa9.85□□□□□ -0.83
SMAD3-213ENST00000560175 PUS1Q9Y606 427 aaKnown RBP eCLIP9.85□□□□□ -0.83
SMAD3-213ENST00000560175 KMT2CQ8NEZ4 4911 aaKnown RBP9.84□□□□□ -0.83
SMAD3-213ENST00000560175 C9orf170A2RU37 121 aa9.84□□□□□ -0.83
SMAD3-213ENST00000560175 YIF1AO95070 293 aa9.84□□□□□ -0.83
SMAD3-213ENST00000560175 NXPH3O95157 252 aa9.84□□□□□ -0.83
SMAD3-213ENST00000560175 CD5P06127 495 aa9.84□□□□□ -0.83
SMAD3-213ENST00000560175 IGLC1P0CG04 106 aa9.84□□□□□ -0.83
SMAD3-213ENST00000560175 VAMP1P23763 118 aa9.84□□□□□ -0.83
SMAD3-213ENST00000560175 NPY1RP25929 384 aa9.84□□□□□ -0.83
SMAD3-213ENST00000560175 CRYBB3P26998 211 aa9.84□□□□□ -0.83
SMAD3-213ENST00000560175 YPEL3P61236 119 aaPredicted RBP9.84□□□□□ -0.83
SMAD3-213ENST00000560175 LILRB2Q8N423 598 aa9.84□□□□□ -0.83
SMAD3-213ENST00000560175 DTD1Q8TEA8 209 aa9.84□□□□□ -0.83
SMAD3-213ENST00000560175 CITED4Q96RK1 184 aa9.84□□□□□ -0.83
SMAD3-213ENST00000560175 SPATA25Q9BR10 227 aa9.84□□□□□ -0.83
SMAD3-213ENST00000560175 GINS3Q9BRX5 216 aa9.84□□□□□ -0.83
SMAD3-213ENST00000560175 SRD5A3Q9H8P0 318 aa9.84□□□□□ -0.83
SMAD3-213ENST00000560175 EDA2RQ9HAV5 297 aa9.84□□□□□ -0.83
SMAD3-213ENST00000560175 CENPXA8MT69 81 aa9.83□□□□□ -0.84
SMAD3-213ENST00000560175 ODF3L2Q3SX64 289 aa9.83□□□□□ -0.84
SMAD3-213ENST00000560175 ETFRF1Q6IPR1 90 aa9.83□□□□□ -0.84
SMAD3-213ENST00000560175 OR1S2Q8NGQ3 325 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms