RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 TRGV3P03979 118 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 DEFA4P12838 97 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 HIST1H1BP16401 226 aaKnown RBP7.25□□□□□ -1.25
HERC1-206ENST00000559996 FCGR2BP31994 310 aaPredicted RBP7.25□□□□□ -1.25
HERC1-206ENST00000559996 GPX4P36969 197 aaPredicted RBP7.25□□□□□ -1.25
HERC1-206ENST00000559996 EIF2B2P49770 351 aaKnown RBP7.25□□□□□ -1.25
HERC1-206ENST00000559996 C15orf32Q32M92 178 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 AWAT1Q58HT5 328 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 OR8G2PQ6IF36 304 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 ACOT7LQ6ZUV0 252 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 MRPL41Q8IXM3 137 aaKnown RBP7.25□□□□□ -1.25
HERC1-206ENST00000559996 C9orf62Q8N4C0 152 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 KCNRGQ8N5I3 272 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 TMEM217Q8N7C4 229 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 NECAP1Q8NC96 275 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 TMEM116Q8NCL8 245 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 ZNF502Q8TBZ5 544 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 VN1R17PQ8TDU5 208 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 CACNG8Q8WXS5 425 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 MISP3Q96FF7 219 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 HYLS1Q96M11 299 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 CCDC140Q96MF4 163 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 SLC25A31Q9H0C2 315 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 SLA2Q9H6Q3 261 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 GNB4Q9HAV0 340 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 ZNF355PQ9NSJ1 428 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 A0A1B0GUS0 222 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 SCO2A0A1W2PP80 73 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 FAM223BA6NKX1 122 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 I3L521 148 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 ARPC5O15511 151 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 IGHV3-23P01764 117 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 IFNA4P05014 189 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 OR8U8P0C7N1 319 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 PF4V1P10720 104 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 S100A11P31949 105 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 RAB11AP62491 216 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 SLC35B1P78383 322 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 DLK1P80370 383 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 BAXQ07812 192 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 FOXL1Q12952 345 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 EXOSC2Q13868 293 aaKnown RBP7.24□□□□□ -1.25
HERC1-206ENST00000559996 ZNF345Q14585 488 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 ZNF343Q6P1L6 599 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 FAM223AQ8IWN6 122 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 COMMD1Q8N668 190 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 OR10P1Q8NGE3 313 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 OR5C1Q8NGR4 320 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 OR4X1Q8NH49 305 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 PINX1Q96BK5 328 aaKnown RBP7.24□□□□□ -1.25
HERC1-206ENST00000559996 USMG5Q96IX5 58 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 GGACTQ9BVM4 153 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 MFFQ9GZY8 342 aa7.24□□□□□ -1.25
HERC1-206ENST00000559996 PAIP2BQ9ULR5 123 aaKnown RBP7.24□□□□□ -1.25
HERC1-206ENST00000559996 LSM4Q9Y4Z0 139 aaKnown RBP7.24□□□□□ -1.25
HERC1-206ENST00000559996 ELOA3CA0A087WX78 387 aaPredicted RBP7.23□□□□□ -1.25
HERC1-206ENST00000559996 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.23□□□□□ -1.25
HERC1-206ENST00000559996 FNDC10F2Z333 226 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 FAM229AH3BQW9 127 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 CORTO00230 105 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 IGKV1-17P01599 117 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 TRBV12-3P01733 135 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 CTSGP08311 255 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 ADMP35318 185 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 OPRK1P41145 380 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 CDX1P47902 265 aaPredicted RBP7.23□□□□□ -1.25
HERC1-206ENST00000559996 TPPP2P59282 170 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 ATP5G2Q06055 141 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 SLC38A11Q08AI6 406 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 OR2F1Q13607 317 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 ZFP69Q49AA0 526 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 TMEM182Q6ZP80 229 aaPredicted RBP7.23□□□□□ -1.25
HERC1-206ENST00000559996 TMUB2Q71RG4 321 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 SLC16A13Q7RTY0 426 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 TMEM144Q7Z5S9 345 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 WFDC12Q8WWY7 111 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 NPIPB3Q92617 1050 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 UBE2E2Q96LR5 201 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 CITED1Q99966 193 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 CITED2Q99967 270 aaPredicted RBP7.23□□□□□ -1.25
HERC1-206ENST00000559996 CHRDL1Q9BU40 450 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 C19orf24Q9BVV8 132 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 FBXL17Q9UF56 701 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 RFNGQ9Y644 331 aa7.23□□□□□ -1.25
HERC1-206ENST00000559996 CLN5O75503 358 aa7.22□□□□□ -1.25
HERC1-206ENST00000559996 IGHV3-11P01762 117 aa7.22□□□□□ -1.25
HERC1-206ENST00000559996 CLEC3BP05452 202 aa7.22□□□□□ -1.25
HERC1-206ENST00000559996 IGLC1P0CG04 106 aa7.22□□□□□ -1.25
HERC1-206ENST00000559996 AP2S1P53680 142 aaPredicted RBP7.22□□□□□ -1.25
HERC1-206ENST00000559996 RUNX1Q01196 453 aa7.22□□□□□ -1.25
HERC1-206ENST00000559996 ATP6V1FQ16864 119 aa7.22□□□□□ -1.25
HERC1-206ENST00000559996 SAMD5Q5TGI4 173 aa7.22□□□□□ -1.25
HERC1-206ENST00000559996 C11orf44Q8N8P7 122 aa7.22□□□□□ -1.25
HERC1-206ENST00000559996 THAP8Q8NA92 274 aa7.22□□□□□ -1.25
HERC1-206ENST00000559996 INO80EQ8NBZ0 244 aaPredicted RBP7.22□□□□□ -1.25
HERC1-206ENST00000559996 CXorf58Q96LI9 332 aa7.22□□□□□ -1.25
HERC1-206ENST00000559996 ATP6V0BQ99437 205 aa7.22□□□□□ -1.25
HERC1-206ENST00000559996 TXN2Q99757 166 aa7.22□□□□□ -1.25
HERC1-206ENST00000559996 SMIM3Q9BZL3 60 aa7.22□□□□□ -1.25
HERC1-206ENST00000559996 ARV1Q9H2C2 271 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms