RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 TRAPPC6BQ86SZ2 158 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 ANGPTL5Q86XS5 388 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 DYNAPQ8N1N2 210 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 RNF182Q8N6D2 247 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 C1orf64Q8NEQ6 169 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 OR5C1Q8NGR4 320 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 TERB2Q8NHR7 220 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 THEM6Q8WUY1 208 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 MBD3L1Q8WWY6 194 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 BORCS5Q969J3 196 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 HSPB9Q9BQS6 159 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 HIGD2AQ9BW72 106 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 RTL8AQ9BWD3 113 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 TMEM133Q9H2Q1 129 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 SLC39A9Q9NUM3 307 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 MED11Q9P086 117 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 OR52A1Q9UKL2 312 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 ERGIC3Q9Y282 383 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 RBM7Q9Y580 266 aaKnown RBP1.98□□□□□ -2.09
SPG11-218ENST00000559754 FAM215AQ9Y5M1 114 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 R4GN34 69 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 ADGRL1O94910 1474 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 CCDC88AQ3V6T2 1871 aa1.98□□□□□ -2.09
SPG11-218ENST00000559754 NUP210Q8TEM1 1887 aaPredicted RBP1.98□□□□□ -2.09
SPG11-218ENST00000559754 CAMSAP2Q08AD1 1489 aa1.97□□□□□ -2.09
SPG11-218ENST00000559754 MDFIC2A0A1B0GVS7 189 aa1.97□□□□□ -2.09
SPG11-218ENST00000559754 CREBL2O60519 120 aaPredicted RBP1.97□□□□□ -2.09
SPG11-218ENST00000559754 GADD45GO95257 159 aa1.97□□□□□ -2.09
SPG11-218ENST00000559754 IGLV3-19P01714 112 aa1.97□□□□□ -2.09
SPG11-218ENST00000559754 ZNF728P0DKX0 622 aa1.97□□□□□ -2.09
SPG11-218ENST00000559754 ZNF14P17017 642 aaPredicted RBP1.97□□□□□ -2.09
SPG11-218ENST00000559754 OGNP20774 298 aaKnown RBP1.97□□□□□ -2.09
SPG11-218ENST00000559754 PSMB8P28062 276 aa1.97□□□□□ -2.09
SPG11-218ENST00000559754 EMP1P54849 157 aa1.97□□□□□ -2.09
SPG11-218ENST00000559754 DEFB115Q30KQ5 88 aa1.97□□□□□ -2.09
SPG11-218ENST00000559754 MIR17HGQ75NE6 70 aa1.97□□□□□ -2.09
SPG11-218ENST00000559754 TCF24Q7RTU0 167 aa1.97□□□□□ -2.09
SPG11-218ENST00000559754 OR5J2Q8NH18 312 aa1.97□□□□□ -2.09
SPG11-218ENST00000559754 SLAMF6Q96DU3 332 aa1.97□□□□□ -2.09
SPG11-218ENST00000559754 ADAT3Q96EY9 351 aaPredicted RBP1.97□□□□□ -2.09
SPG11-218ENST00000559754 SCGB3A1Q96QR1 104 aa1.97□□□□□ -2.09
SPG11-218ENST00000559754 PCTPQ9UKL6 214 aa1.97□□□□□ -2.09
SPG11-218ENST00000559754 ASB4Q9Y574 426 aa1.97□□□□□ -2.09
SPG11-218ENST00000559754 HEATR5AQ86XA9 2040 aa1.96□□□□□ -2.09
SPG11-218ENST00000559754 TAF1LQ8IZX4 1826 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 SCN9AQ15858 1988 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 NCAPD3P42695 1498 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 A0A087X0T9 212 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 TRGV5A0A0B4J1U4 118 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 ZNF860A6NHJ4 632 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 TMEM212A6NML5 194 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 M0QZK8 103 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 TAX1BP3O14907 124 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 GGCTO75223 188 aaKnown RBP1.96□□□□□ -2.1
SPG11-218ENST00000559754 NFYAP23511 347 aaPredicted RBP1.96□□□□□ -2.1
SPG11-218ENST00000559754 RPS28P62857 69 aaKnown RBP1.96□□□□□ -2.1
SPG11-218ENST00000559754 BAMBIQ13145 260 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 LY6EQ16553 131 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 DHFR2Q86XF0 187 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 TMEM86AQ8N2M4 240 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 ST6GALNAC3Q8NDV1 305 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 OR51T1Q8NGJ9 327 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 CANT1Q8WVQ1 401 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 FGF13Q92913 245 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 CCDC115Q96NT0 180 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 DOHHQ9BU89 302 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 CKLFQ9UBR5 152 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 JPT1Q9UK76 154 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 LAMTOR2Q9Y2Q5 125 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 NUBP2Q9Y5Y2 271 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 TECPR2O15040 1411 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 MED1Q15648 1581 aaPredicted RBP1.96□□□□□ -2.1
SPG11-218ENST00000559754 ANKRD31Q8N7Z5 1873 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 EML6Q6ZMW3 1958 aa1.96□□□□□ -2.1
SPG11-218ENST00000559754 MYO16Q9Y6X6 1858 aa1.95□□□□□ -2.1
SPG11-218ENST00000559754 CD109Q6YHK3 1445 aa1.95□□□□□ -2.1
SPG11-218ENST00000559754 A0A0D9SEW6 157 aa1.95□□□□□ -2.1
SPG11-218ENST00000559754 TLCD2A6NGC4 264 aa1.95□□□□□ -2.1
SPG11-218ENST00000559754 C1orf196B1AJZ1 125 aa1.95□□□□□ -2.1
SPG11-218ENST00000559754 GNRH2O43555 120 aa1.95□□□□□ -2.1
SPG11-218ENST00000559754 TRGC2P03986 189 aa1.95□□□□□ -2.1
SPG11-218ENST00000559754 SRP14P37108 136 aaKnown RBP1.95□□□□□ -2.1
SPG11-218ENST00000559754 RPL28P46779 137 aaKnown RBP1.95□□□□□ -2.1
SPG11-218ENST00000559754 EVX1P49640 407 aa1.95□□□□□ -2.1
SPG11-218ENST00000559754 POLR2HP52434 150 aaKnown RBP1.95□□□□□ -2.1
SPG11-218ENST00000559754 BCL2L15Q5TBC7 163 aa1.95□□□□□ -2.1
SPG11-218ENST00000559754 LYZL1Q6UWQ5 148 aa1.95□□□□□ -2.1
SPG11-218ENST00000559754 CROCCP2Q86T23 111 aa1.95□□□□□ -2.1
SPG11-218ENST00000559754 LHFPL1Q86WI0 220 aa1.95□□□□□ -2.1
SPG11-218ENST00000559754 HIST3H2BBQ8N257 126 aa1.95□□□□□ -2.1
SPG11-218ENST00000559754 DNAJC9Q8WXX5 260 aa1.95□□□□□ -2.1
SPG11-218ENST00000559754 LZICQ8WZA0 190 aa1.95□□□□□ -2.1
SPG11-218ENST00000559754 ISOC1Q96CN7 298 aa1.95□□□□□ -2.1
SPG11-218ENST00000559754 GPX7Q96SL4 187 aaPredicted RBP1.95□□□□□ -2.1
SPG11-218ENST00000559754 IMMP2LQ96T52 175 aa1.95□□□□□ -2.1
SPG11-218ENST00000559754 ZNF471Q9BX82 626 aaPredicted RBP1.95□□□□□ -2.1
SPG11-218ENST00000559754 RASL12Q9NYN1 266 aa1.95□□□□□ -2.1
SPG11-218ENST00000559754 GSKIPQ9P0R6 139 aa1.95□□□□□ -2.1
SPG11-218ENST00000559754 PIK3C2AO00443 1686 aa1.95□□□□□ -2.1
SPG11-218ENST00000559754 TRAV7A0A075B6U4 112 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms