RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 IGKV1D-37A0A075B6S9 117 aa13.55□□□□□ -0.24
CHRNA3-206ENST00000559658 NDUFB8O95169 186 aa13.55□□□□□ -0.24
CHRNA3-206ENST00000559658 IGF1P05019 195 aa13.55□□□□□ -0.24
CHRNA3-206ENST00000559658 SEC11BP0C7V7 166 aa13.55□□□□□ -0.24
CHRNA3-206ENST00000559658 CRIP2P52943 208 aaPredicted RBP13.55□□□□□ -0.24
CHRNA3-206ENST00000559658 EIF5AP63241 154 aaKnown RBP13.55□□□□□ -0.24
CHRNA3-206ENST00000559658 AKIRIN2Q53H80 203 aa13.55□□□□□ -0.24
CHRNA3-206ENST00000559658 C10orf99Q6UWK7 81 aa13.55□□□□□ -0.24
CHRNA3-206ENST00000559658 CXorf58Q96LI9 332 aa13.55□□□□□ -0.24
CHRNA3-206ENST00000559658 MS4A10Q96PG2 267 aa13.55□□□□□ -0.24
CHRNA3-206ENST00000559658 GGTLC1Q9BX51 225 aa13.55□□□□□ -0.24
CHRNA3-206ENST00000559658 GATA2P23769 480 aaPredicted RBP13.55□□□□□ -0.24
CHRNA3-206ENST00000559658 GPX4P36969 197 aaPredicted RBP13.55□□□□□ -0.24
CHRNA3-206ENST00000559658 GCSAMLQ5JQS6 135 aa13.55□□□□□ -0.24
CHRNA3-206ENST00000559658 LCNL1Q6ZST4 164 aa13.55□□□□□ -0.24
CHRNA3-206ENST00000559658 NPVFQ9HCQ7 196 aa13.55□□□□□ -0.24
CHRNA3-206ENST00000559658 AGPAT2O15120 278 aa13.54□□□□□ -0.24
CHRNA3-206ENST00000559658 SCAF4O95104 1147 aaKnown RBP13.54□□□□□ -0.24
CHRNA3-206ENST00000559658 MIC13Q5XKP0 118 aa13.54□□□□□ -0.24
CHRNA3-206ENST00000559658 SLC35E1Q96K37 410 aa13.54□□□□□ -0.24
CHRNA3-206ENST00000559658 ZNF355PQ9NSJ1 428 aa13.54□□□□□ -0.24
CHRNA3-206ENST00000559658 TEPPQ6URK8 271 aa13.53□□□□□ -0.24
CHRNA3-206ENST00000559658 TMEM144Q7Z5S9 345 aa13.53□□□□□ -0.24
CHRNA3-206ENST00000559658 CACNG8Q8WXS5 425 aa13.53□□□□□ -0.24
CHRNA3-206ENST00000559658 GNPNAT1Q96EK6 184 aaPredicted RBP13.53□□□□□ -0.24
CHRNA3-206ENST00000559658 FAM181BA6NEQ2 426 aa13.53□□□□□ -0.24
CHRNA3-206ENST00000559658 FNDC10F2Z333 226 aa13.53□□□□□ -0.24
CHRNA3-206ENST00000559658 F8W735 103 aaPredicted RBP13.53□□□□□ -0.24
CHRNA3-206ENST00000559658 PPIFP30405 207 aaKnown RBP13.53□□□□□ -0.24
CHRNA3-206ENST00000559658 OR10J1P30954 320 aa13.53□□□□□ -0.24
CHRNA3-206ENST00000559658 CAMLGP49069 296 aa13.53□□□□□ -0.24
CHRNA3-206ENST00000559658 SULT1A2P50226 295 aa13.53□□□□□ -0.24
CHRNA3-206ENST00000559658 RAB2AP61019 212 aa13.53□□□□□ -0.24
CHRNA3-206ENST00000559658 ZNF90Q03938 601 aa13.53□□□□□ -0.24
CHRNA3-206ENST00000559658 RBMS3Q6XE24 437 aaKnown RBP13.53□□□□□ -0.24
CHRNA3-206ENST00000559658 SSX7Q7RTT5 188 aa13.53□□□□□ -0.24
CHRNA3-206ENST00000559658 ZNF329Q86UD4 541 aa13.53□□□□□ -0.24
CHRNA3-206ENST00000559658 CDC42EP3Q9UKI2 254 aa13.53□□□□□ -0.24
CHRNA3-206ENST00000559658 CORTO00230 105 aa13.52□□□□□ -0.25
CHRNA3-206ENST00000559658 FOSL1P15407 271 aa13.52□□□□□ -0.25
CHRNA3-206ENST00000559658 RHOGP84095 191 aa13.52□□□□□ -0.25
CHRNA3-206ENST00000559658 SRSF2Q01130 221 aaKnown RBP13.52□□□□□ -0.25
CHRNA3-206ENST00000559658 CFHR3Q02985 330 aa13.52□□□□□ -0.25
CHRNA3-206ENST00000559658 PSMG3Q9BT73 122 aaPredicted RBP13.52□□□□□ -0.25
CHRNA3-206ENST00000559658 FBXL7Q9UJT9 491 aa13.52□□□□□ -0.25
CHRNA3-206ENST00000559658 ZNF705EA8MWA4 302 aaPredicted RBP13.51□□□□□ -0.25
CHRNA3-206ENST00000559658 TRIM77I1YAP6 450 aa13.51□□□□□ -0.25
CHRNA3-206ENST00000559658 AP4M1O00189 453 aa13.51□□□□□ -0.25
CHRNA3-206ENST00000559658 YIF1AO95070 293 aa13.51□□□□□ -0.25
CHRNA3-206ENST00000559658 CENPVQ7Z7K6 275 aaPredicted RBP13.51□□□□□ -0.25
CHRNA3-206ENST00000559658 NPFFR1Q9GZQ6 430 aa13.51□□□□□ -0.25
CHRNA3-206ENST00000559658 KLK15Q9H2R5 256 aa13.51□□□□□ -0.25
CHRNA3-206ENST00000559658 PXMP4Q9Y6I8 212 aa13.51□□□□□ -0.25
CHRNA3-206ENST00000559658 TEP1Q99973 2627 aaKnown RBP13.51□□□□□ -0.25
CHRNA3-206ENST00000559658 TRBV9A0A0B4J1U6 114 aa13.5□□□□□ -0.25
CHRNA3-206ENST00000559658 C15orf32Q32M92 178 aa13.5□□□□□ -0.25
CHRNA3-206ENST00000559658 CLLU1Q5K131 121 aa13.5□□□□□ -0.25
CHRNA3-206ENST00000559658 FFAR4Q5NUL3 377 aa13.5□□□□□ -0.25
CHRNA3-206ENST00000559658 Q6ZRG5 221 aa13.5□□□□□ -0.25
CHRNA3-206ENST00000559658 SLC7A5P1Q8MH63 180 aa13.5□□□□□ -0.25
CHRNA3-206ENST00000559658 TMEM86BQ8N661 226 aa13.5□□□□□ -0.25
CHRNA3-206ENST00000559658 STPG3Q8N7X2 389 aa13.5□□□□□ -0.25
CHRNA3-206ENST00000559658 TMEM116Q8NCL8 245 aa13.5□□□□□ -0.25
CHRNA3-206ENST00000559658 BPIFCQ8NFQ6 507 aa13.5□□□□□ -0.25
CHRNA3-206ENST00000559658 RPRMQ9NS64 109 aa13.5□□□□□ -0.25
CHRNA3-206ENST00000559658 TIMM9Q9Y5J7 89 aa13.5□□□□□ -0.25
CHRNA3-206ENST00000559658 LINC00869P0C866 280 aa13.5□□□□□ -0.25
CHRNA3-206ENST00000559658 ZNF726P1Q15940 193 aa13.5□□□□□ -0.25
CHRNA3-206ENST00000559658 EIF5AL1Q6IS14 154 aaKnown RBP13.5□□□□□ -0.25
CHRNA3-206ENST00000559658 THAP8Q8NA92 274 aa13.5□□□□□ -0.25
CHRNA3-206ENST00000559658 FAM213BQ8TBF2 198 aa13.5□□□□□ -0.25
CHRNA3-206ENST00000559658 RNF141Q8WVD5 230 aa13.5□□□□□ -0.25
CHRNA3-206ENST00000559658 A0A1B0GV50 99 aa13.49□□□□□ -0.25
CHRNA3-206ENST00000559658 ZFP92A6NM28 416 aa13.49□□□□□ -0.25
CHRNA3-206ENST00000559658 ETFRF1Q6IPR1 90 aa13.49□□□□□ -0.25
CHRNA3-206ENST00000559658 OR1L6Q8NGR2 347 aa13.49□□□□□ -0.25
CHRNA3-206ENST00000559658 PRSS22Q9GZN4 317 aa13.49□□□□□ -0.25
CHRNA3-206ENST00000559658 SLC45A2Q9UMX9 530 aa13.49□□□□□ -0.25
CHRNA3-206ENST00000559658 MAST4O15021 2626 aa13.49□□□□□ -0.25
CHRNA3-206ENST00000559658 MPDU1O75352 247 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 IGLC1P0CG04 106 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 PRR20EP86478 221 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 PRR20CP86479 221 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 PRR20DP86480 221 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 PRR20BP86481 221 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 PRR20AP86496 221 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 KLK9Q2XQG4 91 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 TIGITQ495A1 244 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 ZNF709Q8N972 641 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 OR4X1Q8NH49 305 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 CCDC140Q96MF4 163 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 TMEM68Q96MH6 324 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 KLK9Q9UKQ9 250 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 IGKV1-17P01599 117 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 B2MP61769 119 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 ZNF616Q08AN1 781 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 AKR1C8PQ5T2L2 129 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 PXDC1Q5TGL8 231 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 HIST2H2BDQ6DRA6 164 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 CYP2G1PQ6ZSU1 146 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms