RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 EGFEM1PQ0D2K5 195 aa7.4□□□□□ -1.23
SPG11-214ENST00000558989 RPEL1Q2QD12 228 aa7.4□□□□□ -1.23
SPG11-214ENST00000558989 SPINK9Q5DT21 86 aa7.4□□□□□ -1.23
SPG11-214ENST00000558989 C6orf226Q5I0X4 101 aa7.4□□□□□ -1.23
SPG11-214ENST00000558989 OR4C16Q8NGL9 310 aa7.4□□□□□ -1.23
SPG11-214ENST00000558989 OR13C8Q8NGS7 320 aa7.4□□□□□ -1.23
SPG11-214ENST00000558989 OR4A5Q8NH83 315 aa7.4□□□□□ -1.23
SPG11-214ENST00000558989 MCUBQ9NWR8 336 aa7.4□□□□□ -1.23
SPG11-214ENST00000558989 COMMD9Q9P000 198 aa7.4□□□□□ -1.23
SPG11-214ENST00000558989 COPZ2Q9P299 210 aa7.4□□□□□ -1.23
SPG11-214ENST00000558989 TEX50A0A1B0GTY4 177 aa7.39□□□□□ -1.23
SPG11-214ENST00000558989 DBX1A6NMT0 343 aa7.39□□□□□ -1.23
SPG11-214ENST00000558989 SNAPC5O75971 98 aa7.39□□□□□ -1.23
SPG11-214ENST00000558989 IGKV1-39P01597 117 aa7.39□□□□□ -1.23
SPG11-214ENST00000558989 CD74P04233 296 aa7.39□□□□□ -1.23
SPG11-214ENST00000558989 IGKV1D-39P04432 117 aa7.39□□□□□ -1.23
SPG11-214ENST00000558989 SERPINE2P07093 398 aa7.39□□□□□ -1.23
SPG11-214ENST00000558989 AKAIN1P0CW23 69 aa7.39□□□□□ -1.23
SPG11-214ENST00000558989 OR13C7P0DN81 318 aa7.39□□□□□ -1.23
SPG11-214ENST00000558989 SUMO2P61956 95 aaKnown RBP7.39□□□□□ -1.23
SPG11-214ENST00000558989 PYDC2Q56P42 97 aa7.39□□□□□ -1.23
SPG11-214ENST00000558989 SLC25A42Q86VD7 318 aa7.39□□□□□ -1.23
SPG11-214ENST00000558989 LHFPL1Q86WI0 220 aa7.39□□□□□ -1.23
SPG11-214ENST00000558989 SELENOHQ8IZQ5 122 aaKnown RBP7.39□□□□□ -1.23
SPG11-214ENST00000558989 ARRDC1Q8N5I2 433 aa7.39□□□□□ -1.23
SPG11-214ENST00000558989 TERB2Q8NHR7 220 aa7.39□□□□□ -1.23
SPG11-214ENST00000558989 SCARB1Q8WTV0 552 aa7.39□□□□□ -1.23
SPG11-214ENST00000558989 USMG5Q96IX5 58 aa7.39□□□□□ -1.23
SPG11-214ENST00000558989 OR4C12Q96R67 309 aa7.39□□□□□ -1.23
SPG11-214ENST00000558989 TP53RKQ96S44 253 aa7.39□□□□□ -1.23
SPG11-214ENST00000558989 GAR1Q9NY12 217 aaKnown RBP7.39□□□□□ -1.23
SPG11-214ENST00000558989 ZNF257Q9Y2Q1 563 aa7.39□□□□□ -1.23
SPG11-214ENST00000558989 OR51B2Q9Y5P1 312 aa7.39□□□□□ -1.23
SPG11-214ENST00000558989 RNF222A6NCQ9 220 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 FAM223BA6NKX1 122 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 DISC1C4P0D8 188 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 SNRPEP62304 92 aaKnown RBP7.38□□□□□ -1.23
SPG11-214ENST00000558989 MRPS10P82664 201 aaKnown RBP7.38□□□□□ -1.23
SPG11-214ENST00000558989 POU2AF1Q16633 256 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 TRIM16LQ309B1 348 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 ZNF343Q6P1L6 599 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 CLEC19AQ6UXS0 136 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 H2BFWTQ7Z2G1 175 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 FAM223AQ8IWN6 122 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 NECAP1Q8NC96 275 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 OR51S1Q8NGJ8 323 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 PPP1R14BQ96C90 147 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 QTRT1Q9BXR0 403 aaKnown RBP7.38□□□□□ -1.23
SPG11-214ENST00000558989 RBM38Q9H0Z9 239 aaKnown RBP7.38□□□□□ -1.23
SPG11-214ENST00000558989 TRBV9A0A0B4J1U6 114 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 IGHV3-35A0A0C4DH35 117 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 TEX13DA0A0J9YY54 714 aaPredicted RBP7.38□□□□□ -1.23
SPG11-214ENST00000558989 C3orf85A0A1B0GTC6 90 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 IGLC7A0M8Q6 106 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 PRSS46E5RG02 174 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 TRAPPC2P0DI81 140 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 TRAPPC2BP0DI82 140 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 SPNP16150 400 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 CTRB1P17538 263 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 TBPP20226 339 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 ZP3P21754 424 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 AKR1C2P52895 323 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 MEF2DQ14814 521 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 CTRB2Q6GPI1 263 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 RNASE11Q8TAA1 199 aaKnown RBP7.38□□□□□ -1.23
SPG11-214ENST00000558989 ZFAND1Q8TCF1 268 aa7.38□□□□□ -1.23
SPG11-214ENST00000558989 THAP7Q9BT49 309 aaPredicted RBP7.38□□□□□ -1.23
SPG11-214ENST00000558989 NXF2Q9GZY0 626 aaKnown RBP7.38□□□□□ -1.23
SPG11-214ENST00000558989 C14orf166Q9Y224 244 aaKnown RBP7.38□□□□□ -1.23
SPG11-214ENST00000558989 BMPR1BO00238 502 aa7.37□□□□□ -1.23
SPG11-214ENST00000558989 DHFRP00374 187 aa7.37□□□□□ -1.23
SPG11-214ENST00000558989 WT1-ASQ06250 92 aa7.37□□□□□ -1.23
SPG11-214ENST00000558989 ZNF429Q86V71 674 aa7.37□□□□□ -1.23
SPG11-214ENST00000558989 CCDC71LQ8N9Z2 235 aa7.37□□□□□ -1.23
SPG11-214ENST00000558989 OR1L8Q8NGR8 309 aa7.37□□□□□ -1.23
SPG11-214ENST00000558989 SEC22AQ96IW7 307 aa7.37□□□□□ -1.23
SPG11-214ENST00000558989 C20orf24Q9BUV8 137 aa7.37□□□□□ -1.23
SPG11-214ENST00000558989 ZNF256Q9Y2P7 627 aaPredicted RBP7.37□□□□□ -1.23
SPG11-214ENST00000558989 A0A0A0MQY5 61 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 ANKRD20A5PA0PJZ0 165 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 PRYO14603 147 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 CTSDP07339 412 aaPredicted RBP7.36□□□□□ -1.23
SPG11-214ENST00000558989 OR5AC1P0C628 307 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 RND3P61587 244 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 SSBP1Q04837 148 aaKnown RBP7.36□□□□□ -1.23
SPG11-214ENST00000558989 KLF5Q13887 457 aaPredicted RBP7.36□□□□□ -1.23
SPG11-214ENST00000558989 UBAC2Q8NBM4 344 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 OR9G4Q8NGQ1 327 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 RNF183Q96D59 192 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 ZNF486Q96H40 463 aaPredicted RBP7.36□□□□□ -1.23
SPG11-214ENST00000558989 RTBDNQ9BSG5 229 aaPredicted RBP7.36□□□□□ -1.23
SPG11-214ENST00000558989 PRNDQ9UKY0 176 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 IGLV11-55A0A075B6I3 123 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.36□□□□□ -1.23
SPG11-214ENST00000558989 C15orf61A6NNL5 157 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 H0Y980 276 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 CHEK1O14757 476 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 GSTZ1O43708 216 aaPredicted RBP7.36□□□□□ -1.23
SPG11-214ENST00000558989 NXPH3O95157 252 aa7.36□□□□□ -1.23
SPG11-214ENST00000558989 IGKV1-5P01602 117 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms