RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 NUPR2A6NF83 97 aa9.9□□□□□ -0.82
VPS18-203ENST00000558855 DEDDO75618 318 aa9.9□□□□□ -0.82
VPS18-203ENST00000558855 NXPH3O95157 252 aa9.9□□□□□ -0.82
VPS18-203ENST00000558855 RAB3DO95716 219 aa9.9□□□□□ -0.82
VPS18-203ENST00000558855 IFNA17P01571 189 aa9.9□□□□□ -0.82
VPS18-203ENST00000558855 IGKV1-17P01599 117 aa9.9□□□□□ -0.82
VPS18-203ENST00000558855 HOXA1P49639 335 aaPredicted RBP9.9□□□□□ -0.82
VPS18-203ENST00000558855 DEFB131AP59861 70 aa9.9□□□□□ -0.82
VPS18-203ENST00000558855 NANOS2P60321 138 aaKnown RBP9.9□□□□□ -0.82
VPS18-203ENST00000558855 MEF2DQ14814 521 aa9.9□□□□□ -0.82
VPS18-203ENST00000558855 TRIM16LQ309B1 348 aa9.9□□□□□ -0.82
VPS18-203ENST00000558855 TIGITQ495A1 244 aa9.9□□□□□ -0.82
VPS18-203ENST00000558855 STEAP1BQ6NZ63 245 aa9.9□□□□□ -0.82
VPS18-203ENST00000558855 TERB2Q8NHR7 220 aa9.9□□□□□ -0.82
VPS18-203ENST00000558855 GLYATL2Q8WU03 294 aa9.9□□□□□ -0.82
VPS18-203ENST00000558855 CSTL1Q9H114 145 aa9.9□□□□□ -0.82
VPS18-203ENST00000558855 GABARAPH6UMI1 98 aa9.89□□□□□ -0.83
VPS18-203ENST00000558855 SNCAP37840 140 aa9.89□□□□□ -0.83
VPS18-203ENST00000558855 RBMS2Q15434 407 aaKnown RBP9.89□□□□□ -0.83
VPS18-203ENST00000558855 AARDQ4LEZ3 155 aa9.89□□□□□ -0.83
VPS18-203ENST00000558855 SELENOHQ8IZQ5 122 aaKnown RBP9.89□□□□□ -0.83
VPS18-203ENST00000558855 DUSP18Q8NEJ0 188 aa9.89□□□□□ -0.83
VPS18-203ENST00000558855 OR4C16Q8NGL9 310 aa9.89□□□□□ -0.83
VPS18-203ENST00000558855 PHLDA1Q8WV24 401 aaPredicted RBP9.89□□□□□ -0.83
VPS18-203ENST00000558855 TMEM230Q96A57 120 aa9.89□□□□□ -0.83
VPS18-203ENST00000558855 GPR146Q96CH1 333 aa9.89□□□□□ -0.83
VPS18-203ENST00000558855 TMEM222Q9H0R3 208 aa9.89□□□□□ -0.83
VPS18-203ENST00000558855 COPZ2Q9P299 210 aa9.89□□□□□ -0.83
VPS18-203ENST00000558855 DNAH17Q9UFH2 4485 aa9.89□□□□□ -0.83
VPS18-203ENST00000558855 DNAH2Q9P225 4427 aa9.88□□□□□ -0.83
VPS18-203ENST00000558855 MPTX1A8MV57 137 aa9.88□□□□□ -0.83
VPS18-203ENST00000558855 CLN5O75503 358 aa9.88□□□□□ -0.83
VPS18-203ENST00000558855 CA1P00915 261 aaPredicted RBP9.88□□□□□ -0.83
VPS18-203ENST00000558855 ATF4P18848 351 aaPredicted RBP9.88□□□□□ -0.83
VPS18-203ENST00000558855 TBPP20226 339 aa9.88□□□□□ -0.83
VPS18-203ENST00000558855 C4BPBP20851 252 aa9.88□□□□□ -0.83
VPS18-203ENST00000558855 NPBWR1P48145 328 aa9.88□□□□□ -0.83
VPS18-203ENST00000558855 TAS2R19P59542 299 aa9.88□□□□□ -0.83
VPS18-203ENST00000558855 AP3S1Q92572 193 aa9.88□□□□□ -0.83
VPS18-203ENST00000558855 GINS3Q9BRX5 216 aa9.88□□□□□ -0.83
VPS18-203ENST00000558855 CACNG5Q9UF02 275 aa9.88□□□□□ -0.83
VPS18-203ENST00000558855 KNCNA6PVL3 124 aa9.87□□□□□ -0.83
VPS18-203ENST00000558855 K7EQG2 157 aa9.87□□□□□ -0.83
VPS18-203ENST00000558855 CDS2O95674 445 aa9.87□□□□□ -0.83
VPS18-203ENST00000558855 CRYBB3P26998 211 aa9.87□□□□□ -0.83
VPS18-203ENST00000558855 OPRK1P41145 380 aa9.87□□□□□ -0.83
VPS18-203ENST00000558855 GSG1LQ6UXU4 331 aa9.87□□□□□ -0.83
VPS18-203ENST00000558855 CCDC71LQ8N9Z2 235 aa9.87□□□□□ -0.83
VPS18-203ENST00000558855 OR11H2Q8NH07 326 aa9.87□□□□□ -0.83
VPS18-203ENST00000558855 OR4X1Q8NH49 305 aa9.87□□□□□ -0.83
VPS18-203ENST00000558855 ZFAND1Q8TCF1 268 aa9.87□□□□□ -0.83
VPS18-203ENST00000558855 SMIM4Q8WVI0 70 aa9.87□□□□□ -0.83
VPS18-203ENST00000558855 RARRES2Q99969 163 aa9.87□□□□□ -0.83
VPS18-203ENST00000558855 NAA60Q9H7X0 242 aa9.87□□□□□ -0.83
VPS18-203ENST00000558855 GPR132Q9UNW8 380 aa9.87□□□□□ -0.83
VPS18-203ENST00000558855 FAT2Q9NYQ8 4349 aa9.86□□□□□ -0.83
VPS18-203ENST00000558855 TEX13DA0A0J9YY54 714 aaPredicted RBP9.86□□□□□ -0.83
VPS18-203ENST00000558855 CRYM-AS1A6NIL9 109 aa9.86□□□□□ -0.83
VPS18-203ENST00000558855 RGS5O15539 181 aa9.86□□□□□ -0.83
VPS18-203ENST00000558855 ZNF688P0C7X2 276 aa9.86□□□□□ -0.83
VPS18-203ENST00000558855 IGLC1P0CG04 106 aa9.86□□□□□ -0.83
VPS18-203ENST00000558855 P2RY1P47900 373 aa9.86□□□□□ -0.83
VPS18-203ENST00000558855 PRR20EP86478 221 aa9.86□□□□□ -0.83
VPS18-203ENST00000558855 PRR20CP86479 221 aa9.86□□□□□ -0.83
VPS18-203ENST00000558855 PRR20DP86480 221 aa9.86□□□□□ -0.83
VPS18-203ENST00000558855 PRR20BP86481 221 aa9.86□□□□□ -0.83
VPS18-203ENST00000558855 PRR20AP86496 221 aa9.86□□□□□ -0.83
VPS18-203ENST00000558855 TMEM268Q5VZI3 342 aa9.86□□□□□ -0.83
VPS18-203ENST00000558855 PRSS54Q6PEW0 395 aa9.86□□□□□ -0.83
VPS18-203ENST00000558855 TRPT1Q86TN4 253 aaKnown RBP9.86□□□□□ -0.83
VPS18-203ENST00000558855 Q8NAQ8 132 aa9.86□□□□□ -0.83
VPS18-203ENST00000558855 STXBP6Q8NFX7 210 aa9.86□□□□□ -0.83
VPS18-203ENST00000558855 DYNC2LI1Q8TCX1 351 aa9.86□□□□□ -0.83
VPS18-203ENST00000558855 DCANP1Q8TF63 244 aa9.86□□□□□ -0.83
VPS18-203ENST00000558855 C11orf68Q9H3H3 251 aaKnown RBP9.86□□□□□ -0.83
VPS18-203ENST00000558855 RABAC1Q9UI14 185 aa9.86□□□□□ -0.83
VPS18-203ENST00000558855 U3KQE9 123 aa9.86□□□□□ -0.83
VPS18-203ENST00000558855 RBMY1A1P0DJD3 496 aaKnown RBP9.85□□□□□ -0.83
VPS18-203ENST00000558855 RBMY1CP0DJD4 496 aa9.85□□□□□ -0.83
VPS18-203ENST00000558855 RPL5P46777 297 aaKnown RBP9.85□□□□□ -0.83
VPS18-203ENST00000558855 RND2P52198 227 aa9.85□□□□□ -0.83
VPS18-203ENST00000558855 SPCS3P61009 180 aa9.85□□□□□ -0.83
VPS18-203ENST00000558855 RPL11P62913 178 aaKnown RBP9.85□□□□□ -0.83
VPS18-203ENST00000558855 RBMY1FQ15415 496 aaKnown RBP9.85□□□□□ -0.83
VPS18-203ENST00000558855 USF2Q15853 346 aaPredicted RBP9.85□□□□□ -0.83
VPS18-203ENST00000558855 OR51S1Q8NGJ8 323 aa9.85□□□□□ -0.83
VPS18-203ENST00000558855 RNASE11Q8TAA1 199 aaKnown RBP9.85□□□□□ -0.83
VPS18-203ENST00000558855 GATAD1Q8WUU5 269 aa9.85□□□□□ -0.83
VPS18-203ENST00000558855 RBPMSQ93062 196 aaKnown RBP9.85□□□□□ -0.83
VPS18-203ENST00000558855 RRNAD1Q96FB5 475 aaKnown RBP9.85□□□□□ -0.83
VPS18-203ENST00000558855 PDCD10Q9BUL8 212 aa9.85□□□□□ -0.83
VPS18-203ENST00000558855 MRPS26Q9BYN8 205 aaKnown RBP9.85□□□□□ -0.83
VPS18-203ENST00000558855 FBXL17Q9UF56 701 aa9.85□□□□□ -0.83
VPS18-203ENST00000558855 TRAV2A0A0B4J234 112 aa9.84□□□□□ -0.83
VPS18-203ENST00000558855 DNASE2O00115 360 aaPredicted RBP9.84□□□□□ -0.83
VPS18-203ENST00000558855 CORTO00230 105 aa9.84□□□□□ -0.83
VPS18-203ENST00000558855 NPPCP23582 126 aa9.84□□□□□ -0.83
VPS18-203ENST00000558855 SUPT4H1P63272 117 aaKnown RBP9.84□□□□□ -0.83
VPS18-203ENST00000558855 TMEM187Q14656 261 aa9.84□□□□□ -0.83
VPS18-203ENST00000558855 GPR141Q7Z602 305 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms