RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 SLC2A9Q9NRM0 540 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 PTTG2Q9NZH5 202 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 MRPL36Q9P0J6 103 aaKnown RBP3.19□□□□□ -1.9
SPG11-211ENST00000558561 GPR132Q9UNW8 380 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 PRELID3BQ9Y3B1 194 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 AGRNO00468 2067 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 IGLV11-55A0A075B6I3 123 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 IGLV5-45A0A087WSX0 123 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 TEX13DA0A0J9YY54 714 aaPredicted RBP3.18□□□□□ -1.9
SPG11-211ENST00000558561 FABP12A6NFH5 140 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 CCDC160A6NGH7 325 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 GABARAPH6UMI1 98 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 ZNF207O43670 478 aaKnown RBP3.18□□□□□ -1.9
SPG11-211ENST00000558561 SAP30O75446 220 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 SCGNO76038 276 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 RAB3DO95716 219 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 P0C879 139 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 OR13C7P0DN81 318 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 RRASP10301 218 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 PGAM2P15259 253 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 NQO2P16083 231 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 HLA-GP17693 338 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 RCVRNP35243 200 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 PIGPP57054 158 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 LINC01547P58512 204 aaPredicted RBP3.18□□□□□ -1.9
SPG11-211ENST00000558561 HERV-K104P61576 105 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 RPL8P62917 257 aaKnown RBP3.18□□□□□ -1.9
SPG11-211ENST00000558561 ATP5G2Q06055 141 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 IL18Q14116 193 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 POU2AF1Q16633 256 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 C15orf32Q32M92 178 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 SCGB2B2Q4G0G5 96 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 VAX1Q5SQQ9 334 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 SLC25A24Q6NUK1 477 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 STEAP1BQ6NZ63 245 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 UNQ9165/PRO28630Q6UXU0 137 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 SELENOHQ8IZQ5 122 aaKnown RBP3.18□□□□□ -1.9
SPG11-211ENST00000558561 OR51S1Q8NGJ8 323 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 OR5M8Q8NGP6 311 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 OR4S2Q8NH73 311 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 TERB2Q8NHR7 220 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 GLYATL2Q8WU03 294 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 GPR146Q96CH1 333 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 CHRDL1Q9BU40 450 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 GON7Q9BXV9 100 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 WFDC10AQ9H1F0 79 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 C5orf66Q9H5L9 145 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 NDUFA4L2Q9NRX3 87 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 BET1LQ9NYM9 111 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 PEF1Q9UBV8 284 aaKnown RBP3.18□□□□□ -1.9
SPG11-211ENST00000558561 V9GYH0 126 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 TENM3Q9P273 2699 aa3.18□□□□□ -1.9
SPG11-211ENST00000558561 NBEAL2Q6ZNJ1 2754 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 IGHV3OR16-13A0A075B7E8 117 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 IGHV3-49A0A0A0MS15 119 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.17□□□□□ -1.9
SPG11-211ENST00000558561 IGHV3-74A0A0B4J1X5 117 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 C13orf42A0A1B0GVH6 325 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 ANKRD20A5PA0PJZ0 165 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 K7EIM0 57 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 ST8SIA3O43173 380 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 SLC22A5O76082 557 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 HRASP01112 189 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 APOHP02749 345 aaPredicted RBP3.17□□□□□ -1.9
SPG11-211ENST00000558561 SERPINE2P07093 398 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 CD7P09564 240 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 OR5AC1P0C628 307 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 TRAPPC2P0DI81 140 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 TRAPPC2BP0DI82 140 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 RANBP1P43487 201 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 HOXA1P49639 335 aaPredicted RBP3.17□□□□□ -1.9
SPG11-211ENST00000558561 CCR6P51684 374 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 TAS2R31P59538 309 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 TAS2R46P59540 309 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 SUPT4H1P63272 117 aaKnown RBP3.17□□□□□ -1.9
SPG11-211ENST00000558561 GAGE5Q13069 117 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 GAGE6Q13070 117 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 EXOSC2Q13868 293 aaKnown RBP3.17□□□□□ -1.9
SPG11-211ENST00000558561 KLK9Q2XQG4 91 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 RNASE10Q5GAN6 216 aaKnown RBP3.17□□□□□ -1.9
SPG11-211ENST00000558561 C9orf66Q5T8R8 295 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 PYHIN1Q6K0P9 492 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 SBSPONQ8IVN8 264 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 OR6Q1Q8NGQ2 317 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 RAB2BQ8WUD1 216 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 SMIM4Q8WVI0 70 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 ST6GAL2Q96JF0 529 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 C17orf77Q96MU5 243 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 CCDC59Q9P031 241 aaKnown RBP3.17□□□□□ -1.9
SPG11-211ENST00000558561 KLK9Q9UKQ9 250 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 FLVCR2Q9UPI3 526 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 OR51B2Q9Y5P1 312 aa3.17□□□□□ -1.9
SPG11-211ENST00000558561 C3orf85A0A1B0GTC6 90 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 OR2T8A6NH00 312 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 C15orf62A8K5M9 175 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 CTDSPLO15194 276 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 PLA2G10O15496 165 aa3.16□□□□□ -1.9
SPG11-211ENST00000558561 RBFOX2O43251 390 aaKnown RBP eCLIP3.16□□□□□ -1.9
SPG11-211ENST00000558561 GSTZ1O43708 216 aaPredicted RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms