RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 PAIP2BQ9ULR5 123 aaKnown RBP13.4□□□□□ -0.26
TPM1-214ENST00000558544 K7EPK0 472 aa13.39□□□□□ -0.27
TPM1-214ENST00000558544 S100A10P60903 97 aa13.39□□□□□ -0.27
TPM1-214ENST00000558544 MLANAQ16655 118 aa13.39□□□□□ -0.27
TPM1-214ENST00000558544 SPANXN5Q5MJ07 72 aa13.39□□□□□ -0.27
TPM1-214ENST00000558544 ACSM6Q6P461 480 aa13.39□□□□□ -0.27
TPM1-214ENST00000558544 RNASEH2CQ8TDP1 164 aaKnown RBP13.39□□□□□ -0.27
TPM1-214ENST00000558544 MGAM2Q2M2H8 2515 aa13.39□□□□□ -0.27
TPM1-214ENST00000558544 TGOLN2O43493 480 aa13.38□□□□□ -0.27
TPM1-214ENST00000558544 GGCTO75223 188 aaKnown RBP13.38□□□□□ -0.27
TPM1-214ENST00000558544 LY86O95711 162 aa13.38□□□□□ -0.27
TPM1-214ENST00000558544 TMEM50AO95807 157 aa13.38□□□□□ -0.27
TPM1-214ENST00000558544 IFNA4P05014 189 aa13.38□□□□□ -0.27
TPM1-214ENST00000558544 HNRNPCP07910 306 aaKnown RBP eCLIP13.38□□□□□ -0.27
TPM1-214ENST00000558544 MFAP4P55083 255 aa13.38□□□□□ -0.27
TPM1-214ENST00000558544 H2BFSP57053 126 aa13.38□□□□□ -0.27
TPM1-214ENST00000558544 RAB11AP62491 216 aa13.38□□□□□ -0.27
TPM1-214ENST00000558544 RPP30P78346 268 aaKnown RBP13.38□□□□□ -0.27
TPM1-214ENST00000558544 IL15RAQ13261 267 aa13.38□□□□□ -0.27
TPM1-214ENST00000558544 WFDC9Q8NEX5 89 aa13.38□□□□□ -0.27
TPM1-214ENST00000558544 PSENENQ9NZ42 101 aa13.38□□□□□ -0.27
TPM1-214ENST00000558544 MRPL36Q9P0J6 103 aaKnown RBP13.38□□□□□ -0.27
TPM1-214ENST00000558544 RPS10-NUDT3A0A1W2PQS6 291 aa13.37□□□□□ -0.27
TPM1-214ENST00000558544 OVOL1O14753 267 aa13.37□□□□□ -0.27
TPM1-214ENST00000558544 OR2C1O95371 312 aa13.37□□□□□ -0.27
TPM1-214ENST00000558544 PAX9P55771 341 aa13.37□□□□□ -0.27
TPM1-214ENST00000558544 ATP5IP56385 69 aaPredicted RBP13.37□□□□□ -0.27
TPM1-214ENST00000558544 RAB32Q13637 225 aa13.37□□□□□ -0.27
TPM1-214ENST00000558544 TCTE3Q8IZS6 198 aa13.37□□□□□ -0.27
TPM1-214ENST00000558544 WDR89Q96FK6 387 aaPredicted RBP13.37□□□□□ -0.27
TPM1-214ENST00000558544 BSCL2Q96G97 398 aaPredicted RBP13.37□□□□□ -0.27
TPM1-214ENST00000558544 SMIM8Q96KF7 97 aa13.37□□□□□ -0.27
TPM1-214ENST00000558544 RAB40CQ96S21 281 aa13.37□□□□□ -0.27
TPM1-214ENST00000558544 ATP6V0BQ99437 205 aa13.37□□□□□ -0.27
TPM1-214ENST00000558544 NMES1Q9C002 83 aa13.37□□□□□ -0.27
TPM1-214ENST00000558544 ZNF436Q9C0F3 470 aaPredicted RBP13.37□□□□□ -0.27
TPM1-214ENST00000558544 STRAPQ9Y3F4 350 aaKnown RBP13.37□□□□□ -0.27
TPM1-214ENST00000558544 IGLL1P15814 213 aa13.36□□□□□ -0.27
TPM1-214ENST00000558544 FCGR2BP31994 310 aaPredicted RBP13.36□□□□□ -0.27
TPM1-214ENST00000558544 SYNJ2BPP57105 145 aa13.36□□□□□ -0.27
TPM1-214ENST00000558544 CD69Q07108 199 aa13.36□□□□□ -0.27
TPM1-214ENST00000558544 KLF5Q13887 457 aaPredicted RBP13.36□□□□□ -0.27
TPM1-214ENST00000558544 TXN2Q99757 166 aa13.36□□□□□ -0.27
TPM1-214ENST00000558544 CHRDL1Q9BU40 450 aa13.36□□□□□ -0.27
TPM1-214ENST00000558544 NOTCH3Q9UM47 2321 aa13.35□□□□□ -0.27
TPM1-214ENST00000558544 IGHV3-35A0A0C4DH35 117 aa13.35□□□□□ -0.27
TPM1-214ENST00000558544 L7N2F9 121 aa13.35□□□□□ -0.27
TPM1-214ENST00000558544 GNG7O60262 68 aa13.35□□□□□ -0.27
TPM1-214ENST00000558544 ADMP35318 185 aa13.35□□□□□ -0.27
TPM1-214ENST00000558544 NPBWR1P48145 328 aa13.35□□□□□ -0.27
TPM1-214ENST00000558544 VAMP2P63027 116 aa13.35□□□□□ -0.27
TPM1-214ENST00000558544 LRRC37A5PQ49AS3 106 aa13.35□□□□□ -0.27
TPM1-214ENST00000558544 SLC16A13Q7RTY0 426 aa13.35□□□□□ -0.27
TPM1-214ENST00000558544 RCC1LQ96I51 464 aaKnown RBP13.35□□□□□ -0.27
TPM1-214ENST00000558544 GAR1Q9NY12 217 aaKnown RBP13.35□□□□□ -0.27
TPM1-214ENST00000558544 SMLR1H3BR10 107 aa13.34□□□□□ -0.27
TPM1-214ENST00000558544 TSC22D2O75157 780 aa13.34□□□□□ -0.27
TPM1-214ENST00000558544 CTSGP08311 255 aa13.34□□□□□ -0.27
TPM1-214ENST00000558544 SLC25A4P12235 298 aa13.34□□□□□ -0.27
TPM1-214ENST00000558544 RND2P52198 227 aa13.34□□□□□ -0.27
TPM1-214ENST00000558544 TAS2R30P59541 319 aa13.34□□□□□ -0.27
TPM1-214ENST00000558544 CYCSP99999 105 aaKnown RBP13.34□□□□□ -0.27
TPM1-214ENST00000558544 ETFRF1Q6IPR1 90 aa13.34□□□□□ -0.27
TPM1-214ENST00000558544 PRSS54Q6PEW0 395 aa13.34□□□□□ -0.27
TPM1-214ENST00000558544 SPSB3Q6PJ21 355 aa13.34□□□□□ -0.27
TPM1-214ENST00000558544 C1QL4Q86Z23 238 aa13.34□□□□□ -0.27
TPM1-214ENST00000558544 OR4X1Q8NH49 305 aa13.34□□□□□ -0.27
TPM1-214ENST00000558544 C11orf1Q9H5F2 150 aa13.34□□□□□ -0.27
TPM1-214ENST00000558544 NBEAL1Q6ZS30 2694 aa13.34□□□□□ -0.27
TPM1-214ENST00000558544 SEC14L6B5MCN3 397 aa13.33□□□□□ -0.27
TPM1-214ENST00000558544 NUPL2O15504 423 aaKnown RBP13.33□□□□□ -0.27
TPM1-214ENST00000558544 GIPP09681 153 aaPredicted RBP13.33□□□□□ -0.27
TPM1-214ENST00000558544 PVALBP20472 110 aaPredicted RBP13.33□□□□□ -0.27
TPM1-214ENST00000558544 ACY3Q96HD9 319 aa13.33□□□□□ -0.27
TPM1-214ENST00000558544 PRSS46E5RG02 174 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 G3V3Q6 166 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 G3V4G9 280 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 CLN5O75503 358 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 METTL15P1P0C7V9 234 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 OXLD1Q5BKU9 147 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 OR8G2PQ6IF36 304 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 TMEM14EPQ6UXP3 125 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 GPHB5Q86YW7 130 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 OR9G4Q8NGQ1 327 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 PPP1R1CQ8WVI7 109 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 SLC35E1Q96K37 410 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 MCRIP2Q9BUT9 160 aaKnown RBP13.32□□□□□ -0.28
TPM1-214ENST00000558544 DNAH3Q8TD57 4116 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 PMS2P5A8MQ11 134 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 DEDDO75618 318 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 GPX4P36969 197 aaPredicted RBP13.32□□□□□ -0.28
TPM1-214ENST00000558544 EIF2B2P49770 351 aaKnown RBP13.32□□□□□ -0.28
TPM1-214ENST00000558544 CAV2P51636 162 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 ZFP69Q49AA0 526 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 FAM106AQ4KMX7 169 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 UNQ9165/PRO28630Q6UXU0 137 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 REC114Q7Z4M0 266 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 TMEM116Q8NCL8 245 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 NPIPB3Q92617 1050 aa13.32□□□□□ -0.28
TPM1-214ENST00000558544 ZNF320A2RRD8 509 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms