RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 PRR25Q96S07 402 aa9.4□□□□□ -0.9
SMAD3-205ENST00000558428 SEC22CQ9BRL7 303 aa9.4□□□□□ -0.9
SMAD3-205ENST00000558428 ZNF436Q9C0F3 470 aaPredicted RBP9.4□□□□□ -0.9
SMAD3-205ENST00000558428 FNDC4Q9H6D8 234 aaPredicted RBP9.4□□□□□ -0.9
SMAD3-205ENST00000558428 SIGLEC8Q9NYZ4 499 aa9.4□□□□□ -0.9
SMAD3-205ENST00000558428 U3KQ87 197 aa9.4□□□□□ -0.9
SMAD3-205ENST00000558428 RPS10-NUDT3A0A1W2PQS6 291 aa9.39□□□□□ -0.91
SMAD3-205ENST00000558428 A8MWP6 167 aa9.39□□□□□ -0.91
SMAD3-205ENST00000558428 CTSGP08311 255 aa9.39□□□□□ -0.91
SMAD3-205ENST00000558428 IAPPP10997 89 aa9.39□□□□□ -0.91
SMAD3-205ENST00000558428 FOLR2P14207 255 aa9.39□□□□□ -0.91
SMAD3-205ENST00000558428 EDN2P20800 178 aa9.39□□□□□ -0.91
SMAD3-205ENST00000558428 DEFA1P59665 94 aa9.39□□□□□ -0.91
SMAD3-205ENST00000558428 DEFA3P59666 94 aa9.39□□□□□ -0.91
SMAD3-205ENST00000558428 RELQ04864 619 aaPredicted RBP9.39□□□□□ -0.91
SMAD3-205ENST00000558428 MLANAQ16655 118 aa9.39□□□□□ -0.91
SMAD3-205ENST00000558428 UXS1Q8NBZ7 420 aa9.39□□□□□ -0.91
SMAD3-205ENST00000558428 RNASEH2CQ8TDP1 164 aaKnown RBP9.39□□□□□ -0.91
SMAD3-205ENST00000558428 DYNLRB2Q8TF09 96 aa9.39□□□□□ -0.91
SMAD3-205ENST00000558428 ZNF431Q8TF32 576 aaPredicted RBP9.39□□□□□ -0.91
SMAD3-205ENST00000558428 TMEM170AQ8WVE7 144 aa9.39□□□□□ -0.91
SMAD3-205ENST00000558428 MAGT1Q9H0U3 335 aa9.39□□□□□ -0.91
SMAD3-205ENST00000558428 PALMDQ9NP74 551 aa9.39□□□□□ -0.91
SMAD3-205ENST00000558428 TMEM213A2RRL7 107 aa9.38□□□□□ -0.91
SMAD3-205ENST00000558428 NDUFA4O00483 81 aa9.38□□□□□ -0.91
SMAD3-205ENST00000558428 SYNGR2O43760 224 aa9.38□□□□□ -0.91
SMAD3-205ENST00000558428 TM4SF20Q53R12 229 aa9.38□□□□□ -0.91
SMAD3-205ENST00000558428 ADAMTSL5Q6ZMM2 481 aa9.38□□□□□ -0.91
SMAD3-205ENST00000558428 NRARPQ7Z6K4 114 aa9.38□□□□□ -0.91
SMAD3-205ENST00000558428 CACNG8Q8WXS5 425 aa9.38□□□□□ -0.91
SMAD3-205ENST00000558428 TMEM190Q8WZ59 177 aa9.38□□□□□ -0.91
SMAD3-205ENST00000558428 C20orf24Q9BUV8 137 aa9.38□□□□□ -0.91
SMAD3-205ENST00000558428 MRPL36Q9P0J6 103 aaKnown RBP9.38□□□□□ -0.91
SMAD3-205ENST00000558428 UFC1Q9Y3C8 167 aa9.38□□□□□ -0.91
SMAD3-205ENST00000558428 WRBO00258 174 aa9.37□□□□□ -0.91
SMAD3-205ENST00000558428 CLN5O75503 358 aa9.37□□□□□ -0.91
SMAD3-205ENST00000558428 IFNA4P05014 189 aa9.37□□□□□ -0.91
SMAD3-205ENST00000558428 GP9P14770 177 aa9.37□□□□□ -0.91
SMAD3-205ENST00000558428 CBLN1P23435 193 aa9.37□□□□□ -0.91
SMAD3-205ENST00000558428 NKX2-1P43699 371 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-205ENST00000558428 IAH1Q2TAA2 248 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-205ENST00000558428 DEFB121Q5J5C9 76 aa9.37□□□□□ -0.91
SMAD3-205ENST00000558428 LCN12Q6JVE5 192 aa9.37□□□□□ -0.91
SMAD3-205ENST00000558428 C12orf45Q8N5I9 185 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-205ENST00000558428 OR4D5Q8NGN0 318 aa9.37□□□□□ -0.91
SMAD3-205ENST00000558428 OR4X1Q8NH49 305 aa9.37□□□□□ -0.91
SMAD3-205ENST00000558428 OR10C1Q96KK4 312 aa9.37□□□□□ -0.91
SMAD3-205ENST00000558428 CIB3Q96Q77 187 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-205ENST00000558428 PAIP2BQ9ULR5 123 aaKnown RBP9.37□□□□□ -0.91
SMAD3-205ENST00000558428 IGHV3OR16-8A0A075B7F1 116 aa9.36□□□□□ -0.91
SMAD3-205ENST00000558428 C15orf62A8K5M9 175 aa9.36□□□□□ -0.91
SMAD3-205ENST00000558428 FAM25EA8MYX2 175 aa9.36□□□□□ -0.91
SMAD3-205ENST00000558428 CCSO14618 274 aa9.36□□□□□ -0.91
SMAD3-205ENST00000558428 SCGB2A1O75556 95 aa9.36□□□□□ -0.91
SMAD3-205ENST00000558428 YIF1AO95070 293 aa9.36□□□□□ -0.91
SMAD3-205ENST00000558428 TMEM50AO95807 157 aa9.36□□□□□ -0.91
SMAD3-205ENST00000558428 SCGB1D2O95969 90 aa9.36□□□□□ -0.91
SMAD3-205ENST00000558428 IL5P05113 134 aa9.36□□□□□ -0.91
SMAD3-205ENST00000558428 SLC25A4P12235 298 aa9.36□□□□□ -0.91
SMAD3-205ENST00000558428 RND2P52198 227 aa9.36□□□□□ -0.91
SMAD3-205ENST00000558428 ELLP55199 621 aaPredicted RBP9.36□□□□□ -0.91
SMAD3-205ENST00000558428 ATP5IP56385 69 aaPredicted RBP9.36□□□□□ -0.91
SMAD3-205ENST00000558428 POLR2GP62487 172 aaKnown RBP eCLIP9.36□□□□□ -0.91
SMAD3-205ENST00000558428 RAB11AP62491 216 aa9.36□□□□□ -0.91
SMAD3-205ENST00000558428 RPP30P78346 268 aaKnown RBP9.36□□□□□ -0.91
SMAD3-205ENST00000558428 ID3Q02535 119 aa9.36□□□□□ -0.91
SMAD3-205ENST00000558428 CD300EQ496F6 205 aaPredicted RBP9.36□□□□□ -0.91
SMAD3-205ENST00000558428 ETFRF1Q6IPR1 90 aa9.36□□□□□ -0.91
SMAD3-205ENST00000558428 ZBTB8BQ8NAP8 495 aaPredicted RBP9.36□□□□□ -0.91
SMAD3-205ENST00000558428 OR2K2Q8NGT1 345 aa9.36□□□□□ -0.91
SMAD3-205ENST00000558428 GPN1Q9HCN4 374 aaPredicted RBP9.36□□□□□ -0.91
SMAD3-205ENST00000558428 DAZ1Q9NQZ3 744 aaKnown RBP9.36□□□□□ -0.91
SMAD3-205ENST00000558428 TECRQ9NZ01 308 aaKnown RBP9.36□□□□□ -0.91
SMAD3-205ENST00000558428 GSKIPQ9P0R6 139 aa9.36□□□□□ -0.91
SMAD3-205ENST00000558428 IZUMO1RA6ND01 250 aa9.35□□□□□ -0.91
SMAD3-205ENST00000558428 C5orf51A6NDU8 294 aa9.35□□□□□ -0.91
SMAD3-205ENST00000558428 INMT-MINDY4F8WBC2 141 aa9.35□□□□□ -0.91
SMAD3-205ENST00000558428 ZNF207O43670 478 aaKnown RBP9.35□□□□□ -0.91
SMAD3-205ENST00000558428 SSSCA1O60232 199 aa9.35□□□□□ -0.91
SMAD3-205ENST00000558428 CD69Q07108 199 aa9.35□□□□□ -0.91
SMAD3-205ENST00000558428 DCTN2Q13561 401 aaKnown RBP9.35□□□□□ -0.91
SMAD3-205ENST00000558428 DEFB114Q30KQ6 69 aa9.35□□□□□ -0.91
SMAD3-205ENST00000558428 PRSS54Q6PEW0 395 aa9.35□□□□□ -0.91
SMAD3-205ENST00000558428 ZNF600Q6ZNG1 722 aa9.35□□□□□ -0.91
SMAD3-205ENST00000558428 SLC16A13Q7RTY0 426 aa9.35□□□□□ -0.91
SMAD3-205ENST00000558428 TMEM116Q8NCL8 245 aa9.35□□□□□ -0.91
SMAD3-205ENST00000558428 MARC2Q969Z3 335 aa9.35□□□□□ -0.91
SMAD3-205ENST00000558428 ZNF414Q96IQ9 312 aa9.35□□□□□ -0.91
SMAD3-205ENST00000558428 MRPL27Q9P0M9 148 aaKnown RBP9.35□□□□□ -0.91
SMAD3-205ENST00000558428 MLXQ9UH92 298 aa9.35□□□□□ -0.91
SMAD3-205ENST00000558428 SELENOKQ9Y6D0 94 aa9.35□□□□□ -0.91
SMAD3-205ENST00000558428 TRAV30A0A087WSZ9 112 aa9.34□□□□□ -0.91
SMAD3-205ENST00000558428 H3BP45 60 aa9.34□□□□□ -0.91
SMAD3-205ENST00000558428 K7EMT4 169 aa9.34□□□□□ -0.91
SMAD3-205ENST00000558428 PRAF2O60831 178 aa9.34□□□□□ -0.91
SMAD3-205ENST00000558428 C8orf88P0DMB2 117 aa9.34□□□□□ -0.91
SMAD3-205ENST00000558428 TIGITQ495A1 244 aa9.34□□□□□ -0.91
SMAD3-205ENST00000558428 SPANXN5Q5MJ07 72 aa9.34□□□□□ -0.91
SMAD3-205ENST00000558428 BTNL8Q6UX41 500 aa9.34□□□□□ -0.91
SMAD3-205ENST00000558428 TOMM20LQ6UXN7 152 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms