RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 A0A1W2PPQ1 181 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 OOSP1A8MZH6 123 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 BUB1B-PAK6H3BSN5 160 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 M0R1W7 72 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 CCL21O00585 134 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 ISLRO14498 428 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 COX7A2P2O60397 106 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 LIPFP07098 398 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 CRYGCP07315 174 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 CRYGBP07316 175 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 FAM87AP0C7U9 286 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 CEACAM3P40198 252 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 RPL27AP46776 148 aaKnown RBP6.71□□□□□ -1.34
SPG11-209ENST00000558253 RANP62826 216 aaKnown RBP6.71□□□□□ -1.34
SPG11-209ENST00000558253 IQCJQ1A5X6 159 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 C10orf113Q5VZT2 155 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 TEX38Q6PEX7 206 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 MIR17HGQ75NE6 70 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 C11orf42Q8N5U0 333 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 LY6G5BQ8NDX9 201 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 SGMS2Q8NHU3 365 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 OCC1Q8TAD7 63 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 PERPQ96FX8 193 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 GPR61Q9BZJ8 451 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 OSTCQ9NRP0 149 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 IL36BQ9NZH7 164 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 YTHDF2Q9Y5A9 579 aaKnown RBP6.71□□□□□ -1.34
SPG11-209ENST00000558253 DYSFO75923 2080 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 CACNA1DQ01668 2161 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 PPIAL4CA0A0B4J2A2 164 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 A0A0U1RQK1 487 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 SCO2A0A1W2PP80 73 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 ZNF320A2RRD8 509 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 XKRY2A2RUG3 117 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 PSMB11A5LHX3 300 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 IFITM10A6NMD0 228 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 ENSAO43768 121 aaKnown RBP6.7□□□□□ -1.34
SPG11-209ENST00000558253 OR7C2O60412 319 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 FCN3O75636 299 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 MT-ND6P03923 174 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 PPIAL4GP0DN37 164 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 PLP1P60201 277 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 WT1-ASQ06250 92 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 COTL1Q14019 142 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 WDR73Q6P4I2 378 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 RASL11AQ6T310 242 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 ZNF841Q6ZN19 808 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 NECAP1Q8NC96 275 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 TMEM116Q8NCL8 245 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 RPEQ96AT9 228 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 TMEM18Q96B42 140 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 EAF1Q96JC9 268 aaPredicted RBP6.7□□□□□ -1.34
SPG11-209ENST00000558253 CBLN4Q9NTU7 201 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 CDC42EP3Q9UKI2 254 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 SIGLEC9Q9Y336 463 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 TRAPPC1Q9Y5R8 145 aa6.7□□□□□ -1.34
SPG11-209ENST00000558253 IGKV1OR2-108A0A075B7D4 117 aa6.69□□□□□ -1.34
SPG11-209ENST00000558253 IGHV1-3A0A0C4DH29 117 aa6.69□□□□□ -1.34
SPG11-209ENST00000558253 LY6LH3BQJ8 138 aa6.69□□□□□ -1.34
SPG11-209ENST00000558253 SLC25A17O43808 307 aa6.69□□□□□ -1.34
SPG11-209ENST00000558253 FOXH1O75593 365 aa6.69□□□□□ -1.34
SPG11-209ENST00000558253 SOD3P08294 240 aa6.69□□□□□ -1.34
SPG11-209ENST00000558253 REG1BP48304 166 aa6.69□□□□□ -1.34
SPG11-209ENST00000558253 CNN1P51911 297 aaKnown RBP6.69□□□□□ -1.34
SPG11-209ENST00000558253 RPL15P61313 204 aaKnown RBP6.69□□□□□ -1.34
SPG11-209ENST00000558253 ZNF90Q03938 601 aa6.69□□□□□ -1.34
SPG11-209ENST00000558253 RPEL1Q2QD12 228 aa6.69□□□□□ -1.34
SPG11-209ENST00000558253 PRR30Q53SZ7 412 aaPredicted RBP6.69□□□□□ -1.34
SPG11-209ENST00000558253 CCDC144NLQ6NUI1 221 aa6.69□□□□□ -1.34
SPG11-209ENST00000558253 PPP1R27Q86WC6 154 aa6.69□□□□□ -1.34
SPG11-209ENST00000558253 KIR3DL3Q8N743 410 aa6.69□□□□□ -1.34
SPG11-209ENST00000558253 OR11H6Q8NGC7 330 aa6.69□□□□□ -1.34
SPG11-209ENST00000558253 OR10W1Q8NGF6 305 aa6.69□□□□□ -1.34
SPG11-209ENST00000558253 NPIPB3Q92617 1050 aa6.69□□□□□ -1.34
SPG11-209ENST00000558253 MISP3Q96FF7 219 aa6.69□□□□□ -1.34
SPG11-209ENST00000558253 PAXXQ9BUH6 204 aa6.69□□□□□ -1.34
SPG11-209ENST00000558253 GOLT1BQ9Y3E0 138 aa6.69□□□□□ -1.34
SPG11-209ENST00000558253 EP300Q09472 2414 aaPredicted RBP6.69□□□□□ -1.34
SPG11-209ENST00000558253 WDFY4Q6ZS81 3184 aa6.69□□□□□ -1.34
SPG11-209ENST00000558253 TANC2Q9HCD6 1990 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 DSCAMO60469 2012 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 TRBV20OR9-2A0A075B6H5 130 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 IGLC7A0M8Q6 106 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 CGB1A6NKQ9 187 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 HYPMO75409 117 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 FABP4P15090 132 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 MYOD1P15172 320 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 COL8A2P25067 703 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 HTR1DP28221 377 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 S100A7P31151 101 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 ERVFC1-1P60608 527 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 UBE2L3P68036 154 aaKnown RBP6.68□□□□□ -1.34
SPG11-209ENST00000558253 CENPWQ5EE01 88 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 SPATA31B1PQ5VZV4 182 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 FAM231DQ6ZW35 169 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 MOB3BQ86TA1 216 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 OR5T1Q8NG75 326 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 TMEM37Q8WXS4 190 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 FAM167A-AS1Q96KT0 104 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 HIST1H2BLQ99880 126 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms