RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 HSD52Q0P140 79 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 SYCNQ0VAF6 134 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 CST6Q15828 149 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 ZNF141Q15928 474 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 SP6Q3SY56 376 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 VMA21Q3ZAQ7 101 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 FBXL19-AS1Q494R0 122 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 PYY3Q5JQD4 70 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 UBE2NLQ5JXB2 153 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 TMEM244Q5VVB8 128 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 RPL22L1Q6P5R6 122 aaKnown RBP1.72□□□□□ -2.13
SPG11-206ENST00000558093 ZNF773Q6PK81 442 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 Q6Q795 121 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 LINC00596Q86U02 117 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 LHFPL1Q86WI0 220 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 LINC00471Q8N535 108 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 RBMXL1Q96E39 390 aaKnown RBP1.72□□□□□ -2.13
SPG11-206ENST00000558093 KCNS1Q96KK3 526 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 DERL3Q96Q80 235 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 GPX7Q96SL4 187 aaPredicted RBP1.72□□□□□ -2.13
SPG11-206ENST00000558093 SLC25A21Q9BQT8 299 aaPredicted RBP1.72□□□□□ -2.13
SPG11-206ENST00000558093 SAMD10Q9BYL1 202 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 OTORQ9NRC9 128 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 FAM49BQ9NUQ9 324 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 FBXL12Q9NXK8 326 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 LAMTOR3Q9UHA4 124 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 FIS1Q9Y3D6 152 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 V9GYS6 101 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 SIPA1L1O43166 1804 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 PRG4Q92954 1404 aaPredicted RBP1.72□□□□□ -2.13
SPG11-206ENST00000558093 KIAA1107Q9UPP5 1409 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 TANC2Q9HCD6 1990 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 MYH1P12882 1939 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 KDM5DQ9BY66 1539 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 GRIN2AQ12879 1464 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 TCOF1Q13428 1488 aaKnown RBP1.71□□□□□ -2.14
SPG11-206ENST00000558093 IGHV3-74A0A0B4J1X5 117 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 TRAV41A0A0B4J266 112 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 FAM236AA0A1B0GUQ0 79 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 FAM236BA0A1B0GV22 79 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 TMEM223A0PJW6 202 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 TMEM72A0PK05 275 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 ODAMA1E959 279 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 GGT3PA6NGU5 568 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 BBIP1A8MTZ0 92 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 A8MUN3 132 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 B4DEV8 164 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 GGTLC3B5MD39 225 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 NDUFC2-KCTD14E9PQ53 114 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 ZNF670-ZNF695F2Z2N8 137 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 H0YJW9 148 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 LY6LH3BQJ8 138 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 RPL36A-HNRNPH2H7BZ11 118 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 J3QRK9 145 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 LGALS9O00182 355 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 LST1O00453 97 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 COX7A2P2O60397 106 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 DEDDO75618 318 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 APOMO95445 188 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 HLA-DQB1P01920 261 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 ZNF728P0DKX0 622 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 SMIM10L2AP0DMW4 78 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 SMIM10L2BP0DMW5 78 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 IGHV1-8P0DP01 117 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 CTSEP14091 401 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 ATP6V0CP27449 155 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 OPRK1P41145 380 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 GUCA1AP43080 201 aaPredicted RBP1.71□□□□□ -2.14
SPG11-206ENST00000558093 NDUFA6P56556 154 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 GABARAPL2P60520 117 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 RPS11P62280 158 aaKnown RBP eCLIP1.71□□□□□ -2.14
SPG11-206ENST00000558093 RPL23P62829 140 aaKnown RBP1.71□□□□□ -2.14
SPG11-206ENST00000558093 ELOCQ15369 112 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 RTL8BQ17RB0 113 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 MEIG1Q5JSS6 88 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 FAM78AQ5JUQ0 283 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 CLLU1OSQ5K130 101 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 TMEM14EPQ6UXP3 125 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 Q6ZS49 121 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 SLC35E3Q7Z769 313 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 WDR86Q86TI4 376 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 MARCH3Q86UD3 253 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 GKN2Q86XP6 184 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 C1orf174Q8IYL3 243 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 DRAM1Q8N682 238 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 C15orf56Q8N910 161 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 FER1L6-AS1Q8NA97 138 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 C5orf17Q8NAS9 161 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 OR4K5Q8NGD3 323 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 OR5D14Q8NGL3 314 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 OR10D4PQ8NGN7 298 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 PPTC7Q8NI37 304 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 RBPMSQ93062 196 aaKnown RBP1.71□□□□□ -2.14
SPG11-206ENST00000558093 TMEM106AQ96A25 262 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 MAGOHBQ96A72 148 aaKnown RBP1.71□□□□□ -2.14
SPG11-206ENST00000558093 GNPNAT1Q96EK6 184 aaPredicted RBP1.71□□□□□ -2.14
SPG11-206ENST00000558093 OR4C12Q96R67 309 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 PEBP4Q96S96 227 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 DERL1Q9BUN8 251 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 CHAC1Q9BUX1 264 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms