RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 HSBP1O75506 76 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 IGLV2-8P01709 118 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 RPP30P78346 268 aaKnown RBP10.06□□□□□ -0.8
LDLR-205ENST00000557933 CX3CL1P78423 397 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 ITLN1Q8WWA0 313 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 BORCS7Q96B45 105 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 RNF2Q99496 336 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 BSNQ9UPA5 3926 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 ISLRO14498 428 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 MOSP00540 346 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 RAB31Q13636 194 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 EBLN2Q6P2I7 272 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 IL19Q9UHD0 177 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 TRGV10A0A0A0MS01 117 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 IGHV3-72A0A0B4J1Y9 119 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 A0A1W2PRD5 423 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 A0A1W2PRF3 423 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 A0A1W2PRM7 423 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 M0R2Z0 102 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 SFTPCP11686 197 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 KIR2DL2P43627 348 aaPredicted RBP10.06□□□□□ -0.8
LDLR-205ENST00000557933 HSPE1P61604 102 aaKnown RBP10.06□□□□□ -0.8
LDLR-205ENST00000557933 ETFRF1Q6IPR1 90 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 DEFB124Q8NES8 71 aa10.06□□□□□ -0.8
LDLR-205ENST00000557933 GSX1Q9H4S2 264 aaPredicted RBP10.06□□□□□ -0.8
LDLR-205ENST00000557933 IGHV2OR16-5A0A0B4J2B6 119 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 IGHV1-18A0A0C4DH31 117 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 MPDU1O75352 247 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 CSN3P07498 182 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 ADH4P08319 380 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 CEACAM8P31997 349 aaPredicted RBP10.05□□□□□ -0.8
LDLR-205ENST00000557933 MDS2Q8NDY4 140 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 OR4S2Q8NH73 311 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 C18orf32Q8TCD1 76 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 ZNF331Q9NQX6 463 aaPredicted RBP10.05□□□□□ -0.8
LDLR-205ENST00000557933 MRPL36Q9P0J6 103 aaKnown RBP10.05□□□□□ -0.8
LDLR-205ENST00000557933 ZFHX3Q15911 3703 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 ZGRF1Q86YA3 2104 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 TLN1Q9Y490 2541 aaKnown RBP10.05□□□□□ -0.8
LDLR-205ENST00000557933 hDV102S1A0JD36 115 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 C20orf202A1L168 122 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 VWC2LB2RUY7 222 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 M0QZK8 103 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 CTRLP40313 264 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 PRR20EP86478 221 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 PRR20CP86479 221 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 PRR20DP86480 221 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 PRR20BP86481 221 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 PRR20AP86496 221 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 FAM90A1Q86YD7 464 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 ZNF439Q8NDP4 499 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 OR4B1Q8NGF8 309 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 OR8B2Q96RD0 313 aa10.05□□□□□ -0.8
LDLR-205ENST00000557933 CELSR1Q9NYQ6 3014 aa10.04□□□□□ -0.8
LDLR-205ENST00000557933 MT-CO2P00403 227 aa10.04□□□□□ -0.8
LDLR-205ENST00000557933 ORM2P19652 201 aa10.04□□□□□ -0.8
LDLR-205ENST00000557933 Q6ZT83 130 aa10.04□□□□□ -0.8
LDLR-205ENST00000557933 SPACA3Q8IXA5 215 aa10.04□□□□□ -0.8
LDLR-205ENST00000557933 OTOGLQ3ZCN5 2332 aa10.04□□□□□ -0.8
LDLR-205ENST00000557933 IGLL1P15814 213 aa10.04□□□□□ -0.8
LDLR-205ENST00000557933 C17orf58Q2M2W7 97 aa10.04□□□□□ -0.8
LDLR-205ENST00000557933 C22orf34Q6ZV56 151 aa10.04□□□□□ -0.8
LDLR-205ENST00000557933 IGFBPL1Q8WX77 278 aa10.04□□□□□ -0.8
LDLR-205ENST00000557933 GNB1LQ9BYB4 327 aa10.04□□□□□ -0.8
LDLR-205ENST00000557933 SLC45A2Q9UMX9 530 aa10.04□□□□□ -0.8
LDLR-205ENST00000557933 ZFP30Q9Y2G7 519 aa10.04□□□□□ -0.8
LDLR-205ENST00000557933 HIGD1CA8MV81 97 aa10.03□□□□□ -0.8
LDLR-205ENST00000557933 CCL3L1P16619 93 aa10.03□□□□□ -0.8
LDLR-205ENST00000557933 CCL8P80075 99 aa10.03□□□□□ -0.8
LDLR-205ENST00000557933 Q0VG73 95 aa10.03□□□□□ -0.8
LDLR-205ENST00000557933 HCP5Q6MZN7 132 aa10.03□□□□□ -0.8
LDLR-205ENST00000557933 ZNF841Q6ZN19 808 aa10.03□□□□□ -0.8
LDLR-205ENST00000557933 NEUROG1Q92886 237 aa10.03□□□□□ -0.8
LDLR-205ENST00000557933 UQCR10Q9UDW1 63 aa10.03□□□□□ -0.8
LDLR-205ENST00000557933 MALRD1Q5VYJ5 2156 aa10.03□□□□□ -0.8
LDLR-205ENST00000557933 TRAV8-1A0A0A6YYK1 113 aa10.03□□□□□ -0.8
LDLR-205ENST00000557933 AMY1AP04745 511 aa10.03□□□□□ -0.8
LDLR-205ENST00000557933 SAA1P0DJI8 122 aaPredicted RBP10.03□□□□□ -0.8
LDLR-205ENST00000557933 AREGP15514 252 aa10.03□□□□□ -0.8
LDLR-205ENST00000557933 TSPOP30536 169 aa10.03□□□□□ -0.8
LDLR-205ENST00000557933 NUP35Q8NFH5 326 aa10.03□□□□□ -0.8
LDLR-205ENST00000557933 FDCSPQ8NFU4 85 aa10.03□□□□□ -0.8
LDLR-205ENST00000557933 NPIPB3Q92617 1050 aa10.03□□□□□ -0.8
LDLR-205ENST00000557933 ASCL3Q9NQ33 180 aa10.03□□□□□ -0.8
LDLR-205ENST00000557933 ARL2-SNX15V9GYD0 113 aa10.03□□□□□ -0.8
LDLR-205ENST00000557933 IGKV3-15P01624 115 aa10.03□□□□□ -0.8
LDLR-205ENST00000557933 STUMQ69YW2 141 aa10.03□□□□□ -0.8
LDLR-205ENST00000557933 AMMECR1Q9Y4X0 333 aaPredicted RBP10.03□□□□□ -0.8
LDLR-205ENST00000557933 C9JCJ5 164 aa10.02□□□□□ -0.81
LDLR-205ENST00000557933 MGST3O14880 152 aa10.02□□□□□ -0.81
LDLR-205ENST00000557933 CA7P43166 264 aa10.02□□□□□ -0.81
LDLR-205ENST00000557933 SELENOVP59797 346 aa10.02□□□□□ -0.81
LDLR-205ENST00000557933 FOXE3Q13461 319 aa10.02□□□□□ -0.81
LDLR-205ENST00000557933 LINC00322Q6ZN03 302 aaPredicted RBP10.02□□□□□ -0.81
LDLR-205ENST00000557933 ASCL5Q7RTU5 278 aa10.02□□□□□ -0.81
LDLR-205ENST00000557933 DDB2Q92466 427 aa10.02□□□□□ -0.81
LDLR-205ENST00000557933 TMEM14BQ9NUH8 114 aa10.02□□□□□ -0.81
LDLR-205ENST00000557933 JPT1Q9UK76 154 aa10.02□□□□□ -0.81
LDLR-205ENST00000557933 TEX50A0A1B0GTY4 177 aa10.02□□□□□ -0.81
LDLR-205ENST00000557933 CBY3A6NI87 242 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms