RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 KPRPQ5T749 579 aaPredicted RBP10.94□□□□□ -0.66
USP3-205ENST00000557884 GPHB5Q86YW7 130 aa10.94□□□□□ -0.66
USP3-205ENST00000557884 OR4C12Q96R67 309 aa10.94□□□□□ -0.66
USP3-205ENST00000557884 KRTAP3-3Q9BYR6 98 aa10.94□□□□□ -0.66
USP3-205ENST00000557884 KRTAP3-2Q9BYR7 98 aa10.94□□□□□ -0.66
USP3-205ENST00000557884 MRPL36Q9P0J6 103 aaKnown RBP10.94□□□□□ -0.66
USP3-205ENST00000557884 H3BP45 60 aa10.93□□□□□ -0.66
USP3-205ENST00000557884 GNG7O60262 68 aa10.93□□□□□ -0.66
USP3-205ENST00000557884 PRAF2O60831 178 aa10.93□□□□□ -0.66
USP3-205ENST00000557884 PTTG1O95997 202 aa10.93□□□□□ -0.66
USP3-205ENST00000557884 IFNA4P05014 189 aa10.93□□□□□ -0.66
USP3-205ENST00000557884 EDN2P20800 178 aa10.93□□□□□ -0.66
USP3-205ENST00000557884 ID3Q02535 119 aa10.93□□□□□ -0.66
USP3-205ENST00000557884 FAM106AQ4KMX7 169 aa10.93□□□□□ -0.66
USP3-205ENST00000557884 SPSB3Q6PJ21 355 aa10.93□□□□□ -0.66
USP3-205ENST00000557884 UNQ9165/PRO28630Q6UXU0 137 aa10.93□□□□□ -0.66
USP3-205ENST00000557884 IL34Q6ZMJ4 242 aa10.93□□□□□ -0.66
USP3-205ENST00000557884 NOXA1Q86UR1 476 aa10.93□□□□□ -0.66
USP3-205ENST00000557884 RNASEH2CQ8TDP1 164 aaKnown RBP10.93□□□□□ -0.66
USP3-205ENST00000557884 PEMTQ9UBM1 199 aa10.93□□□□□ -0.66
USP3-205ENST00000557884 IGHV3OR16-8A0A075B7F1 116 aa10.92□□□□□ -0.66
USP3-205ENST00000557884 RPS10-NUDT3A0A1W2PQS6 291 aa10.92□□□□□ -0.66
USP3-205ENST00000557884 C15orf62A8K5M9 175 aa10.92□□□□□ -0.66
USP3-205ENST00000557884 SNRPGP15A8MWD9 76 aa10.92□□□□□ -0.66
USP3-205ENST00000557884 NUPL2O15504 423 aaKnown RBP10.92□□□□□ -0.66
USP3-205ENST00000557884 CSN3P07498 182 aa10.92□□□□□ -0.66
USP3-205ENST00000557884 CTSGP08311 255 aa10.92□□□□□ -0.66
USP3-205ENST00000557884 FCGR2BP31994 310 aaPredicted RBP10.92□□□□□ -0.66
USP3-205ENST00000557884 NPBWR1P48145 328 aa10.92□□□□□ -0.66
USP3-205ENST00000557884 SPANXN5Q5MJ07 72 aa10.92□□□□□ -0.66
USP3-205ENST00000557884 GSG1LQ6UXU4 331 aa10.92□□□□□ -0.66
USP3-205ENST00000557884 REC114Q7Z4M0 266 aa10.92□□□□□ -0.66
USP3-205ENST00000557884 CIB3Q96Q77 187 aaPredicted RBP10.92□□□□□ -0.66
USP3-205ENST00000557884 ATP6V0BQ99437 205 aa10.92□□□□□ -0.66
USP3-205ENST00000557884 TXN2Q99757 166 aa10.92□□□□□ -0.66
USP3-205ENST00000557884 PALMDQ9NP74 551 aa10.92□□□□□ -0.66
USP3-205ENST00000557884 GAR1Q9NY12 217 aaKnown RBP10.92□□□□□ -0.66
USP3-205ENST00000557884 C2orf70A6NJV1 201 aa10.91□□□□□ -0.66
USP3-205ENST00000557884 GOSR2O14653 212 aa10.91□□□□□ -0.66
USP3-205ENST00000557884 WIPF1O43516 503 aa10.91□□□□□ -0.66
USP3-205ENST00000557884 SIX6O95475 246 aa10.91□□□□□ -0.66
USP3-205ENST00000557884 MBPP02686 304 aaPredicted RBP10.91□□□□□ -0.66
USP3-205ENST00000557884 INSL3P51460 131 aa10.91□□□□□ -0.66
USP3-205ENST00000557884 RND2P52198 227 aa10.91□□□□□ -0.66
USP3-205ENST00000557884 EGFEM1PQ0D2K5 195 aa10.91□□□□□ -0.66
USP3-205ENST00000557884 DCTN2Q13561 401 aaKnown RBP10.91□□□□□ -0.66
USP3-205ENST00000557884 TM4SF20Q53R12 229 aa10.91□□□□□ -0.66
USP3-205ENST00000557884 PRSS54Q6PEW0 395 aa10.91□□□□□ -0.66
USP3-205ENST00000557884 ADAMTSL5Q6ZMM2 481 aa10.91□□□□□ -0.66
USP3-205ENST00000557884 SLC16A13Q7RTY0 426 aa10.91□□□□□ -0.66
USP3-205ENST00000557884 CACNG8Q8WXS5 425 aa10.91□□□□□ -0.66
USP3-205ENST00000557884 ACY3Q96HD9 319 aa10.91□□□□□ -0.66
USP3-205ENST00000557884 C2orf50Q96LR7 162 aa10.91□□□□□ -0.66
USP3-205ENST00000557884 C20orf24Q9BUV8 137 aa10.91□□□□□ -0.66
USP3-205ENST00000557884 ZNF436Q9C0F3 470 aaPredicted RBP10.91□□□□□ -0.66
USP3-205ENST00000557884 AURKAIP1Q9NWT8 199 aaPredicted RBP10.91□□□□□ -0.66
USP3-205ENST00000557884 RCL1Q9Y2P8 373 aaKnown RBP10.91□□□□□ -0.66
USP3-205ENST00000557884 LSM5Q9Y4Y9 91 aaKnown RBP10.91□□□□□ -0.66
USP3-205ENST00000557884 SELENOKQ9Y6D0 94 aa10.91□□□□□ -0.66
USP3-205ENST00000557884 PRKDCP78527 4128 aaKnown RBP10.9□□□□□ -0.66
USP3-205ENST00000557884 TMEM213A2RRL7 107 aa10.9□□□□□ -0.66
USP3-205ENST00000557884 LGALS9O00182 355 aa10.9□□□□□ -0.66
USP3-205ENST00000557884 ZNF207O43670 478 aaKnown RBP10.9□□□□□ -0.66
USP3-205ENST00000557884 SSNA1O43805 119 aa10.9□□□□□ -0.66
USP3-205ENST00000557884 CLN5O75503 358 aa10.9□□□□□ -0.66
USP3-205ENST00000557884 YIF1AO95070 293 aa10.9□□□□□ -0.66
USP3-205ENST00000557884 TMEM50AO95807 157 aa10.9□□□□□ -0.66
USP3-205ENST00000557884 FOLR2P14207 255 aa10.9□□□□□ -0.66
USP3-205ENST00000557884 ATP5IP56385 69 aaPredicted RBP10.9□□□□□ -0.66
USP3-205ENST00000557884 RAB11AP62491 216 aa10.9□□□□□ -0.66
USP3-205ENST00000557884 RPP30P78346 268 aaKnown RBP10.9□□□□□ -0.66
USP3-205ENST00000557884 CD69Q07108 199 aa10.9□□□□□ -0.66
USP3-205ENST00000557884 OR4X1Q8NH49 305 aa10.9□□□□□ -0.66
USP3-205ENST00000557884 TMEM190Q8WZ59 177 aa10.9□□□□□ -0.66
USP3-205ENST00000557884 ZNF414Q96IQ9 312 aa10.9□□□□□ -0.66
USP3-205ENST00000557884 PSENENQ9NZ42 101 aa10.9□□□□□ -0.66
USP3-205ENST00000557884 STRAPQ9Y3F4 350 aaKnown RBP10.9□□□□□ -0.66
USP3-205ENST00000557884 NDUFA4O00483 81 aa10.89□□□□□ -0.67
USP3-205ENST00000557884 LY86O95711 162 aa10.89□□□□□ -0.67
USP3-205ENST00000557884 SLC25A4P12235 298 aa10.89□□□□□ -0.67
USP3-205ENST00000557884 PAX9P55771 341 aa10.89□□□□□ -0.67
USP3-205ENST00000557884 S100A10P60903 97 aa10.89□□□□□ -0.67
USP3-205ENST00000557884 RELQ04864 619 aaPredicted RBP10.89□□□□□ -0.67
USP3-205ENST00000557884 TIGITQ495A1 244 aa10.89□□□□□ -0.67
USP3-205ENST00000557884 ETFRF1Q6IPR1 90 aa10.89□□□□□ -0.67
USP3-205ENST00000557884 DYNLRB2Q8TF09 96 aa10.89□□□□□ -0.67
USP3-205ENST00000557884 NPIPB3Q92617 1050 aa10.89□□□□□ -0.67
USP3-205ENST00000557884 PRR25Q96S07 402 aa10.89□□□□□ -0.67
USP3-205ENST00000557884 UFC1Q9Y3C8 167 aa10.89□□□□□ -0.67
USP3-205ENST00000557884 ALG5Q9Y673 324 aa10.89□□□□□ -0.67
USP3-205ENST00000557884 WI2-2373I1.2A0A1W2PRP0 233 aa10.88□□□□□ -0.67
USP3-205ENST00000557884 A8MWP6 167 aa10.88□□□□□ -0.67
USP3-205ENST00000557884 K7EPK0 472 aa10.88□□□□□ -0.67
USP3-205ENST00000557884 IGLV1-51P01701 117 aa10.88□□□□□ -0.67
USP3-205ENST00000557884 OR10J1P30954 320 aa10.88□□□□□ -0.67
USP3-205ENST00000557884 RGS21Q2M5E4 152 aa10.88□□□□□ -0.67
USP3-205ENST00000557884 SLC35E1Q96K37 410 aa10.88□□□□□ -0.67
USP3-205ENST00000557884 SMIM8Q96KF7 97 aa10.88□□□□□ -0.67
USP3-205ENST00000557884 RAB40CQ96S21 281 aa10.88□□□□□ -0.67
USP3-205ENST00000557884 C7orf66A4D0T2 115 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms