RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 S100A5P33763 92 aa12.45□□□□□ -0.42
NEDD4-212ENST00000557845 TOMM20LQ6UXN7 152 aa12.45□□□□□ -0.42
NEDD4-212ENST00000557845 IL22RA2Q969J5 263 aa12.45□□□□□ -0.42
NEDD4-212ENST00000557845 RNF2Q99496 336 aa12.45□□□□□ -0.42
NEDD4-212ENST00000557845 RBM38Q9H0Z9 239 aaKnown RBP12.45□□□□□ -0.42
NEDD4-212ENST00000557845 FNDC4Q9H6D8 234 aaPredicted RBP12.45□□□□□ -0.42
NEDD4-212ENST00000557845 V9GYH0 126 aa12.45□□□□□ -0.42
NEDD4-212ENST00000557845 STAB2Q8WWQ8 2551 aa12.44□□□□□ -0.42
NEDD4-212ENST00000557845 IGHV3-49A0A0A0MS15 119 aa12.44□□□□□ -0.42
NEDD4-212ENST00000557845 FAUP35544 74 aaKnown RBP12.44□□□□□ -0.42
NEDD4-212ENST00000557845 OPRK1P41145 380 aa12.44□□□□□ -0.42
NEDD4-212ENST00000557845 HTR2BP41595 481 aa12.44□□□□□ -0.42
NEDD4-212ENST00000557845 SUPT4H1P63272 117 aaKnown RBP12.44□□□□□ -0.42
NEDD4-212ENST00000557845 KLF9Q13886 244 aaPredicted RBP12.44□□□□□ -0.42
NEDD4-212ENST00000557845 ZNF600Q6ZNG1 722 aa12.44□□□□□ -0.42
NEDD4-212ENST00000557845 TOMM5Q8N4H5 51 aa12.44□□□□□ -0.42
NEDD4-212ENST00000557845 TRIM63Q969Q1 353 aa12.44□□□□□ -0.42
NEDD4-212ENST00000557845 FAM110AQ9BQ89 295 aa12.44□□□□□ -0.42
NEDD4-212ENST00000557845 GGTLC1Q9BX51 225 aa12.44□□□□□ -0.42
NEDD4-212ENST00000557845 HEYLQ9NQ87 328 aaPredicted RBP12.44□□□□□ -0.42
NEDD4-212ENST00000557845 PRR13Q9NZ81 148 aa12.44□□□□□ -0.42
NEDD4-212ENST00000557845 MRPL36Q9P0J6 103 aaKnown RBP12.44□□□□□ -0.42
NEDD4-212ENST00000557845 UBQLN2Q9UHD9 624 aa12.44□□□□□ -0.42
NEDD4-212ENST00000557845 OR4C46A6NHA9 309 aa12.43□□□□□ -0.42
NEDD4-212ENST00000557845 CLN5O75503 358 aa12.43□□□□□ -0.42
NEDD4-212ENST00000557845 AP3S2P59780 193 aa12.43□□□□□ -0.42
NEDD4-212ENST00000557845 ZNF79Q15937 498 aa12.43□□□□□ -0.42
NEDD4-212ENST00000557845 OR4X1Q8NH49 305 aa12.43□□□□□ -0.42
NEDD4-212ENST00000557845 GINS3Q9BRX5 216 aa12.43□□□□□ -0.42
NEDD4-212ENST00000557845 PUS1Q9Y606 427 aaKnown RBP eCLIP12.43□□□□□ -0.42
NEDD4-212ENST00000557845 IGHV3OR16-13A0A075B7E8 117 aa12.42□□□□□ -0.42
NEDD4-212ENST00000557845 IGHV3-74A0A0B4J1X5 117 aa12.42□□□□□ -0.42
NEDD4-212ENST00000557845 CEBPZOSA8MTT3 80 aa12.42□□□□□ -0.42
NEDD4-212ENST00000557845 ZNF701M0R085 212 aaPredicted RBP12.42□□□□□ -0.42
NEDD4-212ENST00000557845 SULT1A3P0DMM9 295 aa12.42□□□□□ -0.42
NEDD4-212ENST00000557845 SULT1A4P0DMN0 295 aa12.42□□□□□ -0.42
NEDD4-212ENST00000557845 C2orf83Q53S99 150 aa12.42□□□□□ -0.42
NEDD4-212ENST00000557845 FAM90A2PQ658T7 463 aa12.42□□□□□ -0.42
NEDD4-212ENST00000557845 ZFAND6Q6FIF0 208 aa12.42□□□□□ -0.42
NEDD4-212ENST00000557845 LYZL2Q7Z4W2 148 aa12.42□□□□□ -0.42
NEDD4-212ENST00000557845 CCDC190Q86UF4 302 aa12.42□□□□□ -0.42
NEDD4-212ENST00000557845 ZFAND3Q9H8U3 227 aa12.42□□□□□ -0.42
NEDD4-212ENST00000557845 CACFD1Q9UGQ2 172 aa12.42□□□□□ -0.42
NEDD4-212ENST00000557845 A0A0B4J2A0 478 aa12.41□□□□□ -0.42
NEDD4-212ENST00000557845 A0A1B0GU03 582 aa12.41□□□□□ -0.42
NEDD4-212ENST00000557845 NXPH3O95157 252 aa12.41□□□□□ -0.42
NEDD4-212ENST00000557845 APOHP02749 345 aaPredicted RBP12.41□□□□□ -0.42
NEDD4-212ENST00000557845 ANXA3P12429 323 aa12.41□□□□□ -0.42
NEDD4-212ENST00000557845 ODF3L2Q3SX64 289 aa12.41□□□□□ -0.42
NEDD4-212ENST00000557845 NMSQ5H8A3 153 aa12.41□□□□□ -0.42
NEDD4-212ENST00000557845 NBEAL2Q6ZNJ1 2754 aa12.41□□□□□ -0.42
NEDD4-212ENST00000557845 LGI3Q8N145 548 aa12.41□□□□□ -0.42
NEDD4-212ENST00000557845 SHPKQ9UHJ6 478 aa12.41□□□□□ -0.42
NEDD4-212ENST00000557845 TRAV30A0A087WSZ9 112 aa12.4□□□□□ -0.42
NEDD4-212ENST00000557845 RPS10-NUDT3A0A1W2PQS6 291 aa12.4□□□□□ -0.42
NEDD4-212ENST00000557845 CCR6P51684 374 aa12.4□□□□□ -0.42
NEDD4-212ENST00000557845 LILRB2Q8N423 598 aa12.4□□□□□ -0.42
NEDD4-212ENST00000557845 SLC24A4Q8NFF2 622 aa12.4□□□□□ -0.42
NEDD4-212ENST00000557845 DEDD2Q8WXF8 326 aa12.4□□□□□ -0.42
NEDD4-212ENST00000557845 VSIRQ9H7M9 311 aa12.4□□□□□ -0.42
NEDD4-212ENST00000557845 IGKV3-7A0A075B6H7 116 aa12.39□□□□□ -0.43
NEDD4-212ENST00000557845 SCGB2A1O75556 95 aa12.39□□□□□ -0.43
NEDD4-212ENST00000557845 CD5P06127 495 aa12.39□□□□□ -0.43
NEDD4-212ENST00000557845 NPPCP23582 126 aa12.39□□□□□ -0.43
NEDD4-212ENST00000557845 BMI1P35226 326 aa12.39□□□□□ -0.43
NEDD4-212ENST00000557845 TFPI2P48307 235 aa12.39□□□□□ -0.43
NEDD4-212ENST00000557845 CMC4P56277 68 aaPredicted RBP12.39□□□□□ -0.43
NEDD4-212ENST00000557845 SRPXP78539 464 aa12.39□□□□□ -0.43
NEDD4-212ENST00000557845 SMCO1Q147U7 214 aa12.39□□□□□ -0.43
NEDD4-212ENST00000557845 TMEM128Q5BJH2 165 aa12.39□□□□□ -0.43
NEDD4-212ENST00000557845 TCF24Q7RTU0 167 aa12.39□□□□□ -0.43
NEDD4-212ENST00000557845 TMED4Q7Z7H5 227 aa12.39□□□□□ -0.43
NEDD4-212ENST00000557845 RNASEH2CQ8TDP1 164 aaKnown RBP12.39□□□□□ -0.43
NEDD4-212ENST00000557845 TMEM170AQ8WVE7 144 aa12.39□□□□□ -0.43
NEDD4-212ENST00000557845 ST8SIA2Q92186 375 aa12.39□□□□□ -0.43
NEDD4-212ENST00000557845 SLC25A21Q9BQT8 299 aaPredicted RBP12.39□□□□□ -0.43
NEDD4-212ENST00000557845 OVOL2Q9BRP0 275 aa12.39□□□□□ -0.43
NEDD4-212ENST00000557845 DFFBO76075 338 aa12.38□□□□□ -0.43
NEDD4-212ENST00000557845 IGKV1-17P01599 117 aa12.38□□□□□ -0.43
NEDD4-212ENST00000557845 SLC25A4P12235 298 aa12.38□□□□□ -0.43
NEDD4-212ENST00000557845 APOC4P55056 127 aa12.38□□□□□ -0.43
NEDD4-212ENST00000557845 PAFAH1B2P68402 229 aa12.38□□□□□ -0.43
NEDD4-212ENST00000557845 TNFRSF9Q07011 255 aa12.38□□□□□ -0.43
NEDD4-212ENST00000557845 TIGITQ495A1 244 aa12.38□□□□□ -0.43
NEDD4-212ENST00000557845 SPANXN2Q5MJ10 180 aa12.38□□□□□ -0.43
NEDD4-212ENST00000557845 PRSS54Q6PEW0 395 aa12.38□□□□□ -0.43
NEDD4-212ENST00000557845 NOXA1Q86UR1 476 aa12.38□□□□□ -0.43
NEDD4-212ENST00000557845 APRG1Q8IVJ8 170 aa12.38□□□□□ -0.43
NEDD4-212ENST00000557845 GBGT1Q8N5D6 347 aa12.38□□□□□ -0.43
NEDD4-212ENST00000557845 HSPB7Q9UBY9 170 aa12.38□□□□□ -0.43
NEDD4-212ENST00000557845 PIGBOS1A0A0B4J2F0 54 aa12.37□□□□□ -0.43
NEDD4-212ENST00000557845 IGHV3-66A0A0C4DH42 116 aa12.37□□□□□ -0.43
NEDD4-212ENST00000557845 NPY1RP25929 384 aa12.37□□□□□ -0.43
NEDD4-212ENST00000557845 ETFRF1Q6IPR1 90 aa12.37□□□□□ -0.43
NEDD4-212ENST00000557845 SRRQ9GZT4 340 aa12.37□□□□□ -0.43
NEDD4-212ENST00000557845 RBKSQ9H477 322 aa12.37□□□□□ -0.43
NEDD4-212ENST00000557845 U3KQ87 197 aa12.37□□□□□ -0.43
NEDD4-212ENST00000557845 STARD9Q9P2P6 4700 aa12.37□□□□□ -0.43
NEDD4-212ENST00000557845 KIR2DL5BA0A0G2JN68 375 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 KIR2DL5BA0A0G2JPC4 375 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms