RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 NPBWR1P48145 328 aa9.48□□□□□ -0.89
SLIRP-211ENST00000557623 TNFRSF9Q07011 255 aa9.48□□□□□ -0.89
SLIRP-211ENST00000557623 BSXQ3C1V8 233 aa9.48□□□□□ -0.89
SLIRP-211ENST00000557623 ANKRD55Q3KP44 614 aa9.48□□□□□ -0.89
SLIRP-211ENST00000557623 HAPLN4Q86UW8 402 aa9.48□□□□□ -0.89
SLIRP-211ENST00000557623 COQ8AQ8NI60 647 aa9.48□□□□□ -0.89
SLIRP-211ENST00000557623 MARC2Q969Z3 335 aa9.48□□□□□ -0.89
SLIRP-211ENST00000557623 WDR12Q9GZL7 423 aaKnown RBP9.48□□□□□ -0.89
SLIRP-211ENST00000557623 HSPB7Q9UBY9 170 aa9.48□□□□□ -0.89
SLIRP-211ENST00000557623 SMAD5-AS1Q9Y6J3 95 aa9.48□□□□□ -0.89
SLIRP-211ENST00000557623 IGHV3-35A0A0C4DH35 117 aa9.47□□□□□ -0.89
SLIRP-211ENST00000557623 RPS10-NUDT3A0A1W2PQS6 291 aa9.47□□□□□ -0.89
SLIRP-211ENST00000557623 TMEM213A2RRL7 107 aa9.47□□□□□ -0.89
SLIRP-211ENST00000557623 SCGB2A1O75556 95 aa9.47□□□□□ -0.89
SLIRP-211ENST00000557623 CTSGP08311 255 aa9.47□□□□□ -0.89
SLIRP-211ENST00000557623 OR4E1P0C645 316 aa9.47□□□□□ -0.89
SLIRP-211ENST00000557623 OPRK1P41145 380 aa9.47□□□□□ -0.89
SLIRP-211ENST00000557623 ZNF846Q147U1 533 aa9.47□□□□□ -0.89
SLIRP-211ENST00000557623 C2orf83Q53S99 150 aa9.47□□□□□ -0.89
SLIRP-211ENST00000557623 UNQ9165/PRO28630Q6UXU0 137 aa9.47□□□□□ -0.89
SLIRP-211ENST00000557623 SLC24A4Q8NFF2 622 aa9.47□□□□□ -0.89
SLIRP-211ENST00000557623 RNASEH2CQ8TDP1 164 aaKnown RBP9.47□□□□□ -0.89
SLIRP-211ENST00000557623 TMEM190Q8WZ59 177 aa9.47□□□□□ -0.89
SLIRP-211ENST00000557623 CHRDL1Q9BU40 450 aa9.47□□□□□ -0.89
SLIRP-211ENST00000557623 MRPL27Q9P0M9 148 aaKnown RBP9.47□□□□□ -0.89
SLIRP-211ENST00000557623 FLVCR2Q9UPI3 526 aa9.47□□□□□ -0.89
SLIRP-211ENST00000557623 DNAH3Q8TD57 4116 aa9.46□□□□□ -0.89
SLIRP-211ENST00000557623 FAM90A26D6RGX4 464 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 K7EMT4 169 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 PITX3O75364 302 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 MED6O75586 246 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 NXPH3O95157 252 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 IGHV3-48P01763 117 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 HOXB5P09067 269 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 C8orf88P0DMB2 117 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 NPY1RP25929 384 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 ADMP35318 185 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 ATP5IP56385 69 aaPredicted RBP9.46□□□□□ -0.9
SLIRP-211ENST00000557623 CD69Q07108 199 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 DHRS2Q13268 280 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 DEFB114Q30KQ6 69 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 CD300EQ496F6 205 aaPredicted RBP9.46□□□□□ -0.9
SLIRP-211ENST00000557623 C4orf46Q504U0 113 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 TM4SF20Q53R12 229 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 MZT2BQ6NZ67 158 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 ADAMTSL5Q6ZMM2 481 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 LYG2Q86SG7 212 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 GTSCR1Q86UQ5 136 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 UXS1Q8NBZ7 420 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 DTD1Q8TEA8 209 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 B9D2Q9BPU9 175 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 C20orf85Q9H1P6 137 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 RBKSQ9H477 322 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 DAZ1Q9NQZ3 744 aaKnown RBP9.46□□□□□ -0.9
SLIRP-211ENST00000557623 U3KQ87 197 aa9.46□□□□□ -0.9
SLIRP-211ENST00000557623 TRAV30A0A087WSZ9 112 aa9.45□□□□□ -0.9
SLIRP-211ENST00000557623 C15orf62A8K5M9 175 aa9.45□□□□□ -0.9
SLIRP-211ENST00000557623 IFNA10P01566 189 aa9.45□□□□□ -0.9
SLIRP-211ENST00000557623 IFNA21P01568 189 aa9.45□□□□□ -0.9
SLIRP-211ENST00000557623 TCRBP04435 133 aa9.45□□□□□ -0.9
SLIRP-211ENST00000557623 ANXA7P20073 488 aaKnown RBP9.45□□□□□ -0.9
SLIRP-211ENST00000557623 GGNBP1Q5YKI7 109 aa9.45□□□□□ -0.9
SLIRP-211ENST00000557623 ETFRF1Q6IPR1 90 aa9.45□□□□□ -0.9
SLIRP-211ENST00000557623 OR4X1Q8NH49 305 aa9.45□□□□□ -0.9
SLIRP-211ENST00000557623 CACNG8Q8WXS5 425 aa9.45□□□□□ -0.9
SLIRP-211ENST00000557623 FAM240BA0A1B0GVZ2 78 aa9.44□□□□□ -0.9
SLIRP-211ENST00000557623 IZUMO1RA6ND01 250 aa9.44□□□□□ -0.9
SLIRP-211ENST00000557623 CLN5O75503 358 aa9.44□□□□□ -0.9
SLIRP-211ENST00000557623 YIF1AO95070 293 aa9.44□□□□□ -0.9
SLIRP-211ENST00000557623 TMEM50AO95807 157 aa9.44□□□□□ -0.9
SLIRP-211ENST00000557623 SLC25A4P12235 298 aa9.44□□□□□ -0.9
SLIRP-211ENST00000557623 EDN2P20800 178 aa9.44□□□□□ -0.9
SLIRP-211ENST00000557623 CIB3Q96Q77 187 aaPredicted RBP9.44□□□□□ -0.9
SLIRP-211ENST00000557623 C20orf24Q9BUV8 137 aa9.44□□□□□ -0.9
SLIRP-211ENST00000557623 FNDC4Q9H6D8 234 aaPredicted RBP9.44□□□□□ -0.9
SLIRP-211ENST00000557623 TRAV25A0A0B4J276 109 aa9.43□□□□□ -0.9
SLIRP-211ENST00000557623 UPK1BO75841 260 aa9.43□□□□□ -0.9
SLIRP-211ENST00000557623 RPP30P78346 268 aaKnown RBP9.43□□□□□ -0.9
SLIRP-211ENST00000557623 ASAH1Q13510 395 aa9.43□□□□□ -0.9
SLIRP-211ENST00000557623 GUCA2BQ16661 112 aa9.43□□□□□ -0.9
SLIRP-211ENST00000557623 BTNL8Q6UX41 500 aa9.43□□□□□ -0.9
SLIRP-211ENST00000557623 ZNF600Q6ZNG1 722 aa9.43□□□□□ -0.9
SLIRP-211ENST00000557623 Q8N1Y9 231 aa9.43□□□□□ -0.9
SLIRP-211ENST00000557623 OR10C1Q96KK4 312 aa9.43□□□□□ -0.9
SLIRP-211ENST00000557623 GINS3Q9BRX5 216 aa9.43□□□□□ -0.9
SLIRP-211ENST00000557623 MLXQ9UH92 298 aa9.43□□□□□ -0.9
SLIRP-211ENST00000557623 PRKDCP78527 4128 aaKnown RBP9.42□□□□□ -0.9
SLIRP-211ENST00000557623 TRAV6A0A075B6T7 132 aa9.42□□□□□ -0.9
SLIRP-211ENST00000557623 ZNF785A8K8V0 405 aa9.42□□□□□ -0.9
SLIRP-211ENST00000557623 SYNGR2O43760 224 aa9.42□□□□□ -0.9
SLIRP-211ENST00000557623 ADAP1O75689 374 aa9.42□□□□□ -0.9
SLIRP-211ENST00000557623 NHLRC4P0CG21 123 aaPredicted RBP9.42□□□□□ -0.9
SLIRP-211ENST00000557623 BMI1P35226 326 aa9.42□□□□□ -0.9
SLIRP-211ENST00000557623 RAB11AP62491 216 aa9.42□□□□□ -0.9
SLIRP-211ENST00000557623 MLANAQ16655 118 aa9.42□□□□□ -0.9
SLIRP-211ENST00000557623 LAMTOR1Q6IAA8 161 aa9.42□□□□□ -0.9
SLIRP-211ENST00000557623 RBPMS2Q6ZRY4 209 aaKnown RBP9.42□□□□□ -0.9
SLIRP-211ENST00000557623 OR1S2Q8NGQ3 325 aa9.42□□□□□ -0.9
SLIRP-211ENST00000557623 MITD1Q8WV92 249 aa9.42□□□□□ -0.9
SLIRP-211ENST00000557623 NUDT15Q9NV35 164 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms