RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 SLC35E1Q96K37 410 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 FAM167A-AS1Q96KT0 104 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 ZNF430Q9H8G1 570 aaPredicted RBP14.32□□□□□ -0.12
XRCC3-218ENST00000557439 TMEM167BQ9NRX6 74 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 SERTAD4Q9NUC0 356 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 RNF114Q9Y508 228 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 CEP295Q9C0D2 2601 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 PPIAL4EA0A075B759 164 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 PPIAL4DF5H284 164 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 SLC25A17O43808 307 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 PPIAL4FP0DN26 164 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 UBE2L3P68036 154 aaKnown RBP14.32□□□□□ -0.12
XRCC3-218ENST00000557439 IGF2-ASQ6U949 168 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 OR5AN1Q8NGI8 311 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 OR1L8Q8NGR8 309 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 BTF3L4Q96K17 158 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 PPIAL4AQ9Y536 164 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 C8orf88P0DMB2 117 aa14.31□□□□□ -0.12
XRCC3-218ENST00000557439 OSR1Q8TAX0 266 aaPredicted RBP14.31□□□□□ -0.12
XRCC3-218ENST00000557439 NDUFAF3Q9BU61 184 aa14.31□□□□□ -0.12
XRCC3-218ENST00000557439 NAGKQ9UJ70 344 aa14.31□□□□□ -0.12
XRCC3-218ENST00000557439 PSMB11A5LHX3 300 aa14.31□□□□□ -0.12
XRCC3-218ENST00000557439 TMEM178BH3BS89 294 aa14.31□□□□□ -0.12
XRCC3-218ENST00000557439 HCP5Q6MZN7 132 aa14.31□□□□□ -0.12
XRCC3-218ENST00000557439 BAGE3Q86Y29 109 aa14.31□□□□□ -0.12
XRCC3-218ENST00000557439 BAGE2Q86Y30 109 aa14.31□□□□□ -0.12
XRCC3-218ENST00000557439 TBX15Q96SF7 602 aa14.31□□□□□ -0.12
XRCC3-218ENST00000557439 FNDC10F2Z333 226 aa14.3□□□□□ -0.12
XRCC3-218ENST00000557439 ENSAO43768 121 aaKnown RBP14.3□□□□□ -0.12
XRCC3-218ENST00000557439 MOSP00540 346 aa14.3□□□□□ -0.12
XRCC3-218ENST00000557439 ERHP84090 104 aaKnown RBP14.3□□□□□ -0.12
XRCC3-218ENST00000557439 PATE2Q6UY27 113 aa14.3□□□□□ -0.12
XRCC3-218ENST00000557439 FAM103A1Q9BTL3 118 aaKnown RBP14.3□□□□□ -0.12
XRCC3-218ENST00000557439 ZNF355PQ9NSJ1 428 aa14.3□□□□□ -0.12
XRCC3-218ENST00000557439 NAT8BQ9UHF3 227 aa14.3□□□□□ -0.12
XRCC3-218ENST00000557439 DLL1O00548 723 aa14.3□□□□□ -0.12
XRCC3-218ENST00000557439 TIGITQ495A1 244 aa14.3□□□□□ -0.12
XRCC3-218ENST00000557439 HSPB9Q9BQS6 159 aa14.3□□□□□ -0.12
XRCC3-218ENST00000557439 MALRD1Q5VYJ5 2156 aa14.3□□□□□ -0.12
XRCC3-218ENST00000557439 LYNX1G3V0Z9 82 aa14.29□□□□□ -0.12
XRCC3-218ENST00000557439 IGLV2-23P01705 113 aa14.29□□□□□ -0.12
XRCC3-218ENST00000557439 LYNX1P0DP58 116 aa14.29□□□□□ -0.12
XRCC3-218ENST00000557439 CNTFRP26992 372 aa14.29□□□□□ -0.12
XRCC3-218ENST00000557439 SELENOTP62341 195 aa14.29□□□□□ -0.12
XRCC3-218ENST00000557439 NOL4LQ96MY1 436 aaPredicted RBP14.29□□□□□ -0.12
XRCC3-218ENST00000557439 ATG101Q9BSB4 218 aa14.29□□□□□ -0.12
XRCC3-218ENST00000557439 PRRG2O14669 202 aa14.29□□□□□ -0.12
XRCC3-218ENST00000557439 GNG5P63218 68 aa14.29□□□□□ -0.12
XRCC3-218ENST00000557439 TMEM177Q53S58 311 aa14.29□□□□□ -0.12
XRCC3-218ENST00000557439 TOMM20LQ6UXN7 152 aa14.29□□□□□ -0.12
XRCC3-218ENST00000557439 GNB4Q9HAV0 340 aa14.29□□□□□ -0.12
XRCC3-218ENST00000557439 DNAJC4Q9NNZ3 241 aa14.29□□□□□ -0.12
XRCC3-218ENST00000557439 TMEM106BQ9NUM4 274 aa14.29□□□□□ -0.12
XRCC3-218ENST00000557439 MUC6Q6W4X9 2439 aa14.29□□□□□ -0.12
XRCC3-218ENST00000557439 TLN1Q9Y490 2541 aaKnown RBP14.29□□□□□ -0.12
XRCC3-218ENST00000557439 NBASA2RRP1 2371 aa14.29□□□□□ -0.12
XRCC3-218ENST00000557439 SVEP1Q4LDE5 3571 aa14.29□□□□□ -0.12
XRCC3-218ENST00000557439 IGKV1D-37A0A075B6S9 117 aa14.29□□□□□ -0.12
XRCC3-218ENST00000557439 TAS2R45P59539 299 aa14.29□□□□□ -0.12
XRCC3-218ENST00000557439 IGF2BP2-AS1Q96M15 143 aa14.29□□□□□ -0.12
XRCC3-218ENST00000557439 ABCA4P78363 2273 aa14.28□□□□□ -0.12
XRCC3-218ENST00000557439 A0A1W2PPI3 338 aa14.28□□□□□ -0.12
XRCC3-218ENST00000557439 H3BTX0 84 aa14.28□□□□□ -0.12
XRCC3-218ENST00000557439 NDUFB3O43676 98 aa14.28□□□□□ -0.12
XRCC3-218ENST00000557439 COX7A2P2O60397 106 aa14.28□□□□□ -0.12
XRCC3-218ENST00000557439 PRB4P10163 310 aaPredicted RBP14.28□□□□□ -0.12
XRCC3-218ENST00000557439 LOXP28300 417 aaPredicted RBP14.28□□□□□ -0.12
XRCC3-218ENST00000557439 IBA57Q5T440 356 aaKnown RBP14.28□□□□□ -0.12
XRCC3-218ENST00000557439 OR4C13Q8NGP0 309 aa14.28□□□□□ -0.12
XRCC3-218ENST00000557439 RCHY1Q96PM5 261 aa14.28□□□□□ -0.12
XRCC3-218ENST00000557439 MEF2CQ06413 473 aaPredicted RBP14.28□□□□□ -0.12
XRCC3-218ENST00000557439 TCF15Q12870 199 aa14.28□□□□□ -0.12
XRCC3-218ENST00000557439 GSX1Q9H4S2 264 aaPredicted RBP14.28□□□□□ -0.12
XRCC3-218ENST00000557439 LY96Q9Y6Y9 160 aa14.28□□□□□ -0.12
XRCC3-218ENST00000557439 USF1P22415 310 aaPredicted RBP14.27□□□□□ -0.13
XRCC3-218ENST00000557439 TDGF1P3P51864 188 aa14.27□□□□□ -0.13
XRCC3-218ENST00000557439 PRR27Q6MZM9 219 aa14.27□□□□□ -0.13
XRCC3-218ENST00000557439 GFRALQ6UXV0 394 aa14.27□□□□□ -0.13
XRCC3-218ENST00000557439 Q8NA96 180 aa14.27□□□□□ -0.13
XRCC3-218ENST00000557439 TMEM167AQ8TBQ9 72 aa14.27□□□□□ -0.13
XRCC3-218ENST00000557439 RPH3ALQ9UNE2 315 aa14.27□□□□□ -0.13
XRCC3-218ENST00000557439 ORM2P19652 201 aa14.27□□□□□ -0.13
XRCC3-218ENST00000557439 PPOXP50336 477 aa14.27□□□□□ -0.13
XRCC3-218ENST00000557439 C10orf113Q5VZT2 155 aa14.27□□□□□ -0.13
XRCC3-218ENST00000557439 TGIF2LXQ8IUE1 241 aa14.27□□□□□ -0.13
XRCC3-218ENST00000557439 BLNKQ8WV28 456 aa14.27□□□□□ -0.13
XRCC3-218ENST00000557439 IGFBPL1Q8WX77 278 aa14.27□□□□□ -0.13
XRCC3-218ENST00000557439 SAMD10Q9BYL1 202 aa14.27□□□□□ -0.13
XRCC3-218ENST00000557439 CX3CL1P78423 397 aa14.26□□□□□ -0.13
XRCC3-218ENST00000557439 MRGPRG-AS1Q2M3A8 158 aa14.26□□□□□ -0.13
XRCC3-218ENST00000557439 LRRC10Q5BKY1 277 aa14.26□□□□□ -0.13
XRCC3-218ENST00000557439 TMEM136Q6ZRR5 245 aa14.26□□□□□ -0.13
XRCC3-218ENST00000557439 VN1R17PQ8TDU5 208 aa14.26□□□□□ -0.13
XRCC3-218ENST00000557439 RNASE6Q93091 150 aaKnown RBP14.26□□□□□ -0.13
XRCC3-218ENST00000557439 ST6GALNAC6Q969X2 333 aa14.26□□□□□ -0.13
XRCC3-218ENST00000557439 CHODLQ9H9P2 273 aa14.26□□□□□ -0.13
XRCC3-218ENST00000557439 ARHGAP32A7KAX9 2087 aa14.26□□□□□ -0.13
XRCC3-218ENST00000557439 A0A1W2PRE2 83 aa14.26□□□□□ -0.13
XRCC3-218ENST00000557439 MFAP2P55001 183 aa14.26□□□□□ -0.13
XRCC3-218ENST00000557439 RANP62826 216 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms