RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 TM4SF20Q53R12 229 aa12.68□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 C2orf83Q53S99 150 aa12.68□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 GGNBP1Q5YKI7 109 aa12.68□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 PVRIGQ6DKI7 326 aa12.68□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 C11orf87Q6NUJ2 197 aa12.68□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 MZT2BQ6NZ67 158 aa12.68□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 ADAMTSL5Q6ZMM2 481 aa12.68□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 NOXA1Q86UR1 476 aa12.68□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 DAZ1Q9NQZ3 744 aaKnown RBP12.68□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 NUDT15Q9NV35 164 aa12.68□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 TECRQ9NZ01 308 aaKnown RBP12.68□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 SMAD5-AS1Q9Y6J3 95 aa12.68□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 SCGB2A1O75556 95 aa12.67□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 YIF1AO95070 293 aa12.67□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 ELLP55199 621 aaPredicted RBP12.67□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 CD69Q07108 199 aa12.67□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 GTSCR1Q86UQ5 136 aa12.67□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 UXS1Q8NBZ7 420 aa12.67□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 RNASEH2CQ8TDP1 164 aaKnown RBP12.67□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 MARC2Q969Z3 335 aa12.67□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 FNDC4Q9H6D8 234 aaPredicted RBP12.67□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 LSM4Q9Y4Z0 139 aaKnown RBP12.67□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 PRKDCP78527 4128 aaKnown RBP12.67□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 IGHV3OR16-8A0A075B7F1 116 aa12.66□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 FAM240BA0A1B0GVZ2 78 aa12.66□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 IZUMO1RA6ND01 250 aa12.66□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 FAM90A26D6RGX4 464 aa12.66□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 PITX3O75364 302 aa12.66□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 ADAP1O75689 374 aa12.66□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 UPK1BO75841 260 aa12.66□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 IFNA21P01568 189 aa12.66□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 ASAH1Q13510 395 aa12.66□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 DEFB114Q30KQ6 69 aa12.66□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 BTNL8Q6UX41 500 aa12.66□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 OR52B4Q8NGK2 314 aa12.66□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 MRPL27Q9P0M9 148 aaKnown RBP12.66□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 TBC1D24Q9ULP9 559 aa12.66□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 SELENOKQ9Y6D0 94 aa12.66□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 U3KQ87 197 aa12.66□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 SORL1Q92673 2214 aa12.66□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 TGP01266 2768 aa12.65□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 MED6O75586 246 aa12.65□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 IAPPP10997 89 aa12.65□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 GUCA2BQ16661 112 aa12.65□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 ENKURQ8TC29 256 aa12.65□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 MLXQ9UH92 298 aa12.65□□□□□ -0.38
TVP23C-CDRT4-204ENST00000557349 C15orf62A8K5M9 175 aa12.64□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 ZNF207O43670 478 aaKnown RBP12.64□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 CLN5O75503 358 aa12.64□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 IFNA4P05014 189 aa12.64□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 SLC25A4P12235 298 aa12.64□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 MLANAQ16655 118 aa12.64□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 ETFRF1Q6IPR1 90 aa12.64□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 OR4X1Q8NH49 305 aa12.64□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 TMEM170AQ8WVE7 144 aa12.64□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 B9D2Q9BPU9 175 aa12.64□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 MAGT1Q9H0U3 335 aa12.64□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 MRPL36Q9P0J6 103 aaKnown RBP12.64□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 PAIP2BQ9ULR5 123 aaKnown RBP12.64□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 H2AFB2P0C5Z0 115 aa12.63□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 RND2P52198 227 aa12.63□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 ZNF600Q6ZNG1 722 aa12.63□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 TMEM61Q8N0U2 210 aa12.63□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 MITD1Q8WV92 249 aa12.63□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 WDR89Q96FK6 387 aaPredicted RBP12.63□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 CIB3Q96Q77 187 aaPredicted RBP12.63□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 GINS3Q9BRX5 216 aa12.63□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 MPTX1A8MV57 137 aa12.62□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 K7EMT4 169 aa12.62□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 WRBO00258 174 aa12.62□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 SYNGR2O43760 224 aa12.62□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 SCAF4O95104 1147 aaKnown RBP12.62□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 TMEM50AO95807 157 aa12.62□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 C8orf88P0DMB2 117 aa12.62□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 ATP5IP56385 69 aaPredicted RBP12.62□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 CD81P60033 236 aa12.62□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 PRSS54Q6PEW0 395 aa12.62□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 RBPMS2Q6ZRY4 209 aaKnown RBP12.62□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 SLC16A13Q7RTY0 426 aa12.62□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 ACY3Q96HD9 319 aa12.62□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 SEC22CQ9BRL7 303 aa12.62□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 PUS1Q9Y606 427 aaKnown RBP eCLIP12.62□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 TRAV30A0A087WSZ9 112 aa12.61□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 SCGB1D2O95969 90 aa12.61□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 NKX2-1P43699 371 aaPredicted RBP12.61□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 RAB11AP62491 216 aa12.61□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 RPP30P78346 268 aaKnown RBP12.61□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 IAH1Q2TAA2 248 aaPredicted RBP12.61□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 ZNF431Q8TF32 576 aaPredicted RBP12.61□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 OR10C1Q96KK4 312 aa12.61□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 IGHV7-4-1A0A0J9YVY3 117 aa12.6□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 OR10J1P30954 320 aa12.6□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 DEFA1P59665 94 aa12.6□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 DEFA3P59666 94 aa12.6□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 TIGITQ495A1 244 aa12.6□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 TOMM20LQ6UXN7 152 aa12.6□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 Q8N1Y9 231 aa12.6□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 TMEM116Q8NCL8 245 aa12.6□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 OR1S2Q8NGQ3 325 aa12.6□□□□□ -0.39
TVP23C-CDRT4-204ENST00000557349 ZNF414Q96IQ9 312 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms