RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 FUT3P21217 361 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 ATP6V1B2P21281 511 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 DEFB131AP59861 70 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 MAGOHP61326 146 aaKnown RBP2.45□□□□□ -2.02
CHD8-212ENST00000557329 RND3P61587 244 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 ZNF691Q5VV52 312 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 TMEM244Q5VVB8 128 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 FAM159AQ6UWV7 190 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 HACD2Q6Y1H2 254 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 C19orf35Q6ZS72 473 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 ZNF833PQ6ZTB9 187 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 Q8N9L7 120 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 NECAP1Q8NC96 275 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 ZNF439Q8NDP4 499 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 OR10H4Q8NGA5 316 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 OR5D14Q8NGL3 314 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 RNASE8Q8TDE3 154 aaKnown RBP2.45□□□□□ -2.02
CHD8-212ENST00000557329 DEFB104AQ8WTQ1 72 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 MARC2Q969Z3 335 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 PINX1Q96BK5 328 aaKnown RBP2.45□□□□□ -2.02
CHD8-212ENST00000557329 GALMQ96C23 342 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 PELI1Q96FA3 418 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 TMEM80Q96HE8 168 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 NIPSNAP1Q9BPW8 284 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 METTL9Q9H1A3 318 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 LINC00574Q9H8X3 128 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 GORASP2Q9H8Y8 452 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 ISG20L2Q9H9L3 353 aaKnown RBP2.45□□□□□ -2.02
CHD8-212ENST00000557329 RHOFQ9HBH0 211 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 SLC35D1Q9NTN3 355 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 TMEM14BQ9NUH8 114 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 RABAC1Q9UI14 185 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 AP3M1Q9Y2T2 418 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 RBM7Q9Y580 266 aaKnown RBP2.45□□□□□ -2.02
CHD8-212ENST00000557329 PEX16Q9Y5Y5 336 aa2.45□□□□□ -2.02
CHD8-212ENST00000557329 RNF213Q63HN8 5207 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 IGHV3-21A0A0B4J1V1 117 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 IGHV3-66A0A0C4DH42 116 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 FAM231BA6NCW3 169 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 OR2T8A6NH00 312 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 METTL15A6NJ78 407 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 BBIP1A8MTZ0 92 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 M0R1X1 148 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 FXYD1O00168 92 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 NME4O00746 187 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 DHFRP00374 187 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 CD74P04233 296 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 REG1AP05451 166 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 EIF4EP06730 217 aaKnown RBP2.44□□□□□ -2.02
CHD8-212ENST00000557329 RPSAP08865 295 aaKnown RBP2.44□□□□□ -2.02
CHD8-212ENST00000557329 UBCP0CG48 685 aaKnown RBP2.44□□□□□ -2.02
CHD8-212ENST00000557329 SLC2A5P22732 501 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 CRHBPP24387 322 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 CEACAM6P40199 344 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 ZNF137PP52743 207 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 KRTAP10-1P60331 282 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 VSNL1P62760 191 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 VMA21Q3ZAQ7 101 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 Q3ZCU0 254 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 TP53I3Q53FA7 332 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 ACTL10Q5JWF8 245 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 LIPKQ5VXJ0 399 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 DMKNQ6E0U4 476 aaPredicted RBP2.44□□□□□ -2.02
CHD8-212ENST00000557329 SSX9Q7RTT3 188 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 ARPINQ7Z6K5 226 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 SAXO1Q8IYX7 474 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 CEND1Q8N111 149 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 SRSF12Q8WXF0 261 aaKnown RBP2.44□□□□□ -2.02
CHD8-212ENST00000557329 SLC25A38Q96DW6 304 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 CPNE2Q96FN4 548 aaPredicted RBP2.44□□□□□ -2.02
CHD8-212ENST00000557329 RNF2Q99496 336 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 RNF5Q99942 180 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 NIPSNAP3BQ9BS92 247 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 NCOR1P1Q9H4R4 102 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 REEP1Q9H902 201 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 XCL2Q9UBD3 114 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 JPT1Q9UK76 154 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 RAB26Q9ULW5 256 aa2.44□□□□□ -2.02
CHD8-212ENST00000557329 SAMHD1Q9Y3Z3 626 aaKnown RBP2.44□□□□□ -2.02
CHD8-212ENST00000557329 A0A1W2PQL4 384 aaPredicted RBP2.43□□□□□ -2.02
CHD8-212ENST00000557329 KNCNA6PVL3 124 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 F5H768 121 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 J3QLW9 94 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 J3QRK9 145 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 GABRPO00591 440 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 SSX5O60225 188 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 YPEL1O60688 119 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 CCDC22O60826 627 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 HTR1AP08908 422 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 GTF2F2P13984 249 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 RAB3AP20336 220 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 CCL1P22362 96 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 PSMD7P51665 324 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 RBM11P57052 281 aaKnown RBP2.43□□□□□ -2.02
CHD8-212ENST00000557329 FXYD7P58549 80 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 OR2B8PP59922 312 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 PSME3P61289 254 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 DAD1P61803 113 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 PTGES3Q15185 160 aaKnown RBP2.43□□□□□ -2.02
CHD8-212ENST00000557329 Q56UQ5 140 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms