RNA–Protein interactions for RNA: ENST00000557092.5

NEDD1-209, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 554 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-209ENST00000557092 S100A5P33763 92 aa13.73□□□□□ -0.21
NEDD1-209ENST00000557092 OR52E5Q8NH55 327 aa13.73□□□□□ -0.21
NEDD1-209ENST00000557092 TMEM230Q96A57 120 aa13.73□□□□□ -0.21
NEDD1-209ENST00000557092 RNF2Q99496 336 aa13.73□□□□□ -0.21
NEDD1-209ENST00000557092 HEYLQ9NQ87 328 aaPredicted RBP13.73□□□□□ -0.21
NEDD1-209ENST00000557092 PRR13Q9NZ81 148 aa13.73□□□□□ -0.21
NEDD1-209ENST00000557092 TMEM56-RWDD3S4R434 201 aa13.73□□□□□ -0.21
NEDD1-209ENST00000557092 IGHV3OR16-13A0A075B7E8 117 aa13.72□□□□□ -0.21
NEDD1-209ENST00000557092 IGHV3-74A0A0B4J1X5 117 aa13.72□□□□□ -0.21
NEDD1-209ENST00000557092 CHEK1O14757 476 aa13.72□□□□□ -0.21
NEDD1-209ENST00000557092 NXPH3O95157 252 aa13.72□□□□□ -0.21
NEDD1-209ENST00000557092 AP3S2P59780 193 aa13.72□□□□□ -0.21
NEDD1-209ENST00000557092 TMEM187Q14656 261 aa13.72□□□□□ -0.21
NEDD1-209ENST00000557092 AARDQ4LEZ3 155 aa13.72□□□□□ -0.21
NEDD1-209ENST00000557092 PVRIGQ6DKI7 326 aa13.72□□□□□ -0.21
NEDD1-209ENST00000557092 TOMM20LQ6UXN7 152 aa13.72□□□□□ -0.21
NEDD1-209ENST00000557092 ZNF600Q6ZNG1 722 aa13.72□□□□□ -0.21
NEDD1-209ENST00000557092 GALNT14Q96FL9 552 aa13.72□□□□□ -0.21
NEDD1-209ENST00000557092 IGKV3-7A0A075B6H7 116 aa13.71□□□□□ -0.21
NEDD1-209ENST00000557092 SCGB2A1O75556 95 aa13.71□□□□□ -0.21
NEDD1-209ENST00000557092 TMEM50AO95807 157 aa13.71□□□□□ -0.21
NEDD1-209ENST00000557092 SULT1A3P0DMM9 295 aa13.71□□□□□ -0.21
NEDD1-209ENST00000557092 SULT1A4P0DMN0 295 aa13.71□□□□□ -0.21
NEDD1-209ENST00000557092 BMI1P35226 326 aa13.71□□□□□ -0.21
NEDD1-209ENST00000557092 HTR2BP41595 481 aa13.71□□□□□ -0.21
NEDD1-209ENST00000557092 KLF9Q13886 244 aaPredicted RBP13.71□□□□□ -0.21
NEDD1-209ENST00000557092 TOMM5Q8N4H5 51 aa13.71□□□□□ -0.21
NEDD1-209ENST00000557092 IL22RA2Q969J5 263 aa13.71□□□□□ -0.21
NEDD1-209ENST00000557092 TRIM63Q969Q1 353 aa13.71□□□□□ -0.21
NEDD1-209ENST00000557092 FNDC4Q9H6D8 234 aaPredicted RBP13.71□□□□□ -0.21
NEDD1-209ENST00000557092 PUS1Q9Y606 427 aaKnown RBP eCLIP13.71□□□□□ -0.21
NEDD1-209ENST00000557092 V9GYH0 126 aa13.71□□□□□ -0.21
NEDD1-209ENST00000557092 ANXA3P12429 323 aa13.7□□□□□ -0.22
NEDD1-209ENST00000557092 TFPI2P48307 235 aa13.7□□□□□ -0.22
NEDD1-209ENST00000557092 BSXQ3C1V8 233 aa13.7□□□□□ -0.22
NEDD1-209ENST00000557092 ODF3L2Q3SX64 289 aa13.7□□□□□ -0.22
NEDD1-209ENST00000557092 SLC24A4Q8NFF2 622 aa13.7□□□□□ -0.22
NEDD1-209ENST00000557092 MRPL36Q9P0J6 103 aaKnown RBP13.7□□□□□ -0.22
NEDD1-209ENST00000557092 RPS10-NUDT3A0A1W2PQS6 291 aa13.69□□□□□ -0.22
NEDD1-209ENST00000557092 CLN5O75503 358 aa13.69□□□□□ -0.22
NEDD1-209ENST00000557092 MLANAQ16655 118 aa13.69□□□□□ -0.22
NEDD1-209ENST00000557092 TCF24Q7RTU0 167 aa13.69□□□□□ -0.22
NEDD1-209ENST00000557092 TMED4Q7Z7H5 227 aa13.69□□□□□ -0.22
NEDD1-209ENST00000557092 OR4X1Q8NH49 305 aa13.69□□□□□ -0.22
NEDD1-209ENST00000557092 RBM38Q9H0Z9 239 aaKnown RBP13.69□□□□□ -0.22
NEDD1-209ENST00000557092 ZFAND3Q9H8U3 227 aa13.69□□□□□ -0.22
NEDD1-209ENST00000557092 A0A0B4J2A0 478 aa13.68□□□□□ -0.22
NEDD1-209ENST00000557092 APOC4P55056 127 aa13.68□□□□□ -0.22
NEDD1-209ENST00000557092 SUPT4H1P63272 117 aaKnown RBP13.68□□□□□ -0.22
NEDD1-209ENST00000557092 SRPXP78539 464 aa13.68□□□□□ -0.22
NEDD1-209ENST00000557092 ZNF79Q15937 498 aa13.68□□□□□ -0.22
NEDD1-209ENST00000557092 C2orf83Q53S99 150 aa13.68□□□□□ -0.22
NEDD1-209ENST00000557092 LYZL2Q7Z4W2 148 aa13.68□□□□□ -0.22
NEDD1-209ENST00000557092 LGI3Q8N145 548 aa13.68□□□□□ -0.22
NEDD1-209ENST00000557092 GBGT1Q8N5D6 347 aa13.68□□□□□ -0.22
NEDD1-209ENST00000557092 ST8SIA2Q92186 375 aa13.68□□□□□ -0.22
NEDD1-209ENST00000557092 CACFD1Q9UGQ2 172 aa13.68□□□□□ -0.22
NEDD1-209ENST00000557092 SHPKQ9UHJ6 478 aa13.68□□□□□ -0.22
NEDD1-209ENST00000557092 RYR3Q15413 4870 aa13.68□□□□□ -0.22
NEDD1-209ENST00000557092 IGHV3-66A0A0C4DH42 116 aa13.67□□□□□ -0.22
NEDD1-209ENST00000557092 A0A1B0GU03 582 aa13.67□□□□□ -0.22
NEDD1-209ENST00000557092 APOHP02749 345 aaPredicted RBP13.67□□□□□ -0.22
NEDD1-209ENST00000557092 CCR6P51684 374 aa13.67□□□□□ -0.22
NEDD1-209ENST00000557092 PAFAH1B2P68402 229 aa13.67□□□□□ -0.22
NEDD1-209ENST00000557092 TMEM231Q9H6L2 316 aa13.67□□□□□ -0.22
NEDD1-209ENST00000557092 TRAV30A0A087WSZ9 112 aa13.66□□□□□ -0.22
NEDD1-209ENST00000557092 CD5P06127 495 aa13.66□□□□□ -0.22
NEDD1-209ENST00000557092 RPL35AP18077 110 aaKnown RBP13.66□□□□□ -0.22
NEDD1-209ENST00000557092 NPY1RP25929 384 aa13.66□□□□□ -0.22
NEDD1-209ENST00000557092 RPL11P62913 178 aaKnown RBP13.66□□□□□ -0.22
NEDD1-209ENST00000557092 SMCO1Q147U7 214 aa13.66□□□□□ -0.22
NEDD1-209ENST00000557092 TIGITQ495A1 244 aa13.66□□□□□ -0.22
NEDD1-209ENST00000557092 NMSQ5H8A3 153 aa13.66□□□□□ -0.22
NEDD1-209ENST00000557092 SPANXN2Q5MJ10 180 aa13.66□□□□□ -0.22
NEDD1-209ENST00000557092 FAM90A2PQ658T7 463 aa13.66□□□□□ -0.22
NEDD1-209ENST00000557092 CCDC190Q86UF4 302 aa13.66□□□□□ -0.22
NEDD1-209ENST00000557092 WFDC3Q8IUB2 231 aa13.66□□□□□ -0.22
NEDD1-209ENST00000557092 APRG1Q8IVJ8 170 aa13.66□□□□□ -0.22
NEDD1-209ENST00000557092 RNASEH2CQ8TDP1 164 aaKnown RBP13.66□□□□□ -0.22
NEDD1-209ENST00000557092 METTL26Q96S19 204 aa13.66□□□□□ -0.22
NEDD1-209ENST00000557092 VSIRQ9H7M9 311 aa13.66□□□□□ -0.22
NEDD1-209ENST00000557092 PIGBOS1A0A0B4J2F0 54 aa13.65□□□□□ -0.22
NEDD1-209ENST00000557092 ZNF701M0R085 212 aaPredicted RBP13.65□□□□□ -0.22
NEDD1-209ENST00000557092 SLC25A4P12235 298 aa13.65□□□□□ -0.22
NEDD1-209ENST00000557092 NPPCP23582 126 aa13.65□□□□□ -0.22
NEDD1-209ENST00000557092 VAMP1P23763 118 aa13.65□□□□□ -0.22
NEDD1-209ENST00000557092 RND2P52198 227 aa13.65□□□□□ -0.22
NEDD1-209ENST00000557092 CMC4P56277 68 aaPredicted RBP13.65□□□□□ -0.22
NEDD1-209ENST00000557092 TNFRSF9Q07011 255 aa13.65□□□□□ -0.22
NEDD1-209ENST00000557092 NOXA1Q86UR1 476 aa13.65□□□□□ -0.22
NEDD1-209ENST00000557092 OR1S1Q8NH92 325 aa13.65□□□□□ -0.22
NEDD1-209ENST00000557092 IL17DQ8TAD2 202 aa13.65□□□□□ -0.22
NEDD1-209ENST00000557092 OVOL2Q9BRP0 275 aa13.65□□□□□ -0.22
NEDD1-209ENST00000557092 DYNC2H1Q8NCM8 4307 aaKnown RBP13.64□□□□□ -0.23
NEDD1-209ENST00000557092 A0A1W2PS18 150 aa13.64□□□□□ -0.23
NEDD1-209ENST00000557092 DNASE2O00115 360 aaPredicted RBP13.64□□□□□ -0.23
NEDD1-209ENST00000557092 DFFBO76075 338 aa13.64□□□□□ -0.23
NEDD1-209ENST00000557092 IFNA10P01566 189 aa13.64□□□□□ -0.23
NEDD1-209ENST00000557092 IGKV1-17P01599 117 aa13.64□□□□□ -0.23
NEDD1-209ENST00000557092 DEFB135Q30KP9 77 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms