RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 SSBP2P81877 361 aaPredicted RBP12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 FAM209BQ5JX69 171 aa12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 HIST3H2BBQ8N257 126 aa12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 TIMD4Q96H15 378 aa12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 PAXXQ9BUH6 204 aa12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 OR51M1Q9H341 326 aa12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 TMEM167BQ9NRX6 74 aa12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 TNFRSF19Q9NS68 423 aa12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 NOTCH2Q04721 2471 aa12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 USF1P22415 310 aaPredicted RBP12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 CNN1P51911 297 aaKnown RBP12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 GNG5P63218 68 aa12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 EIF4EBP1Q13541 118 aaPredicted RBP12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 TMEM144Q7Z5S9 345 aa12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 OR5B3Q8NH48 314 aa12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 OSR1Q8TAX0 266 aaPredicted RBP12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 DLL1O00548 723 aa12.46□□□□□ -0.41
TMEM55B-207ENST00000557041 C8orf88P0DMB2 117 aa12.46□□□□□ -0.41
TMEM55B-207ENST00000557041 AREGP15514 252 aa12.46□□□□□ -0.41
TMEM55B-207ENST00000557041 GATA4P43694 442 aa12.46□□□□□ -0.41
TMEM55B-207ENST00000557041 DIRC2Q96SL1 478 aa12.46□□□□□ -0.41
TMEM55B-207ENST00000557041 SLC25A33Q9BSK2 321 aa12.46□□□□□ -0.41
TMEM55B-207ENST00000557041 CCDC168Q8NDH2 2452 aa12.46□□□□□ -0.41
TMEM55B-207ENST00000557041 PPOXP50336 477 aa12.46□□□□□ -0.41
TMEM55B-207ENST00000557041 BPIFB3P59826 476 aa12.46□□□□□ -0.41
TMEM55B-207ENST00000557041 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.46□□□□□ -0.41
TMEM55B-207ENST00000557041 HIST1H2BLQ99880 126 aa12.46□□□□□ -0.41
TMEM55B-207ENST00000557041 A0A1W2PN81 502 aa12.46□□□□□ -0.42
TMEM55B-207ENST00000557041 PFN1P07737 140 aaKnown RBP12.46□□□□□ -0.42
TMEM55B-207ENST00000557041 LINC00305Q7Z4B0 112 aa12.46□□□□□ -0.42
TMEM55B-207ENST00000557041 OR52E5Q8NH55 327 aa12.46□□□□□ -0.42
TMEM55B-207ENST00000557041 MS4A10Q96PG2 267 aa12.46□□□□□ -0.42
TMEM55B-207ENST00000557041 USP9XQ93008 2570 aaPredicted RBP12.46□□□□□ -0.42
TMEM55B-207ENST00000557041 TRBV24-1A0A075B6N3 115 aa12.45□□□□□ -0.42
TMEM55B-207ENST00000557041 CRISP2P16562 243 aa12.45□□□□□ -0.42
TMEM55B-207ENST00000557041 CDKN1AP38936 164 aa12.45□□□□□ -0.42
TMEM55B-207ENST00000557041 KRTDAPP60985 99 aa12.45□□□□□ -0.42
TMEM55B-207ENST00000557041 CD69Q07108 199 aa12.45□□□□□ -0.42
TMEM55B-207ENST00000557041 KLF17Q5JT82 389 aaPredicted RBP12.45□□□□□ -0.42
TMEM55B-207ENST00000557041 TMEM186Q96B77 213 aa12.45□□□□□ -0.42
TMEM55B-207ENST00000557041 TRBV20OR9-2A0A075B6H5 130 aa12.45□□□□□ -0.42
TMEM55B-207ENST00000557041 IGKV1OR2-108A0A075B7D4 117 aa12.45□□□□□ -0.42
TMEM55B-207ENST00000557041 KLRD1Q13241 179 aa12.45□□□□□ -0.42
TMEM55B-207ENST00000557041 TMEM256Q8N2U0 113 aa12.45□□□□□ -0.42
TMEM55B-207ENST00000557041 DAZAP1Q96EP5 407 aaKnown RBP12.45□□□□□ -0.42
TMEM55B-207ENST00000557041 ASCL2Q99929 193 aa12.45□□□□□ -0.42
TMEM55B-207ENST00000557041 PGPA6NDG6 321 aa12.45□□□□□ -0.42
TMEM55B-207ENST00000557041 TGOLN2O43493 480 aa12.45□□□□□ -0.42
TMEM55B-207ENST00000557041 IGHV3-23P01764 117 aa12.45□□□□□ -0.42
TMEM55B-207ENST00000557041 RPEL1Q2QD12 228 aa12.45□□□□□ -0.42
TMEM55B-207ENST00000557041 MMD2Q8IY49 270 aa12.45□□□□□ -0.42
TMEM55B-207ENST00000557041 CMTM2Q8TAZ6 248 aa12.45□□□□□ -0.42
TMEM55B-207ENST00000557041 ZNF331Q9NQX6 463 aaPredicted RBP12.45□□□□□ -0.42
TMEM55B-207ENST00000557041 LRRK2Q5S007 2527 aa12.44□□□□□ -0.42
TMEM55B-207ENST00000557041 H0Y8G0 127 aa12.44□□□□□ -0.42
TMEM55B-207ENST00000557041 IGHV1-8P0DP01 117 aa12.44□□□□□ -0.42
TMEM55B-207ENST00000557041 RNASE2P10153 161 aaKnown RBP12.44□□□□□ -0.42
TMEM55B-207ENST00000557041 TMEM11P17152 192 aa12.44□□□□□ -0.42
TMEM55B-207ENST00000557041 RPL29P47914 159 aaKnown RBP12.44□□□□□ -0.42
TMEM55B-207ENST00000557041 WT1-ASQ06250 92 aa12.44□□□□□ -0.42
TMEM55B-207ENST00000557041 MORN5Q5VZ52 161 aa12.44□□□□□ -0.42
TMEM55B-207ENST00000557041 OR8B3Q8NGG8 313 aa12.44□□□□□ -0.42
TMEM55B-207ENST00000557041 DDB2Q92466 427 aa12.44□□□□□ -0.42
TMEM55B-207ENST00000557041 OR8B2Q96RD0 313 aa12.44□□□□□ -0.42
TMEM55B-207ENST00000557041 UBTD1Q9HAC8 227 aa12.44□□□□□ -0.42
TMEM55B-207ENST00000557041 MYO9AB2RTY4 2548 aa12.44□□□□□ -0.42
TMEM55B-207ENST00000557041 ELOA3CA0A087WX78 387 aaPredicted RBP12.44□□□□□ -0.42
TMEM55B-207ENST00000557041 LOXP28300 417 aaPredicted RBP12.44□□□□□ -0.42
TMEM55B-207ENST00000557041 PDPNQ86YL7 162 aa12.44□□□□□ -0.42
TMEM55B-207ENST00000557041 NUP37Q8NFH4 326 aa12.44□□□□□ -0.42
TMEM55B-207ENST00000557041 AMMECR1Q9Y4X0 333 aaPredicted RBP12.44□□□□□ -0.42
TMEM55B-207ENST00000557041 MEF2CQ06413 473 aaPredicted RBP12.43□□□□□ -0.42
TMEM55B-207ENST00000557041 TEX38Q6PEX7 206 aa12.43□□□□□ -0.42
TMEM55B-207ENST00000557041 ZNF439Q8NDP4 499 aa12.43□□□□□ -0.42
TMEM55B-207ENST00000557041 TMEM133Q9H2Q1 129 aa12.43□□□□□ -0.42
TMEM55B-207ENST00000557041 TET2Q6N021 2002 aaPredicted RBP12.43□□□□□ -0.42
TMEM55B-207ENST00000557041 B9A039 149 aa12.43□□□□□ -0.42
TMEM55B-207ENST00000557041 IBA57Q5T440 356 aaKnown RBP12.43□□□□□ -0.42
TMEM55B-207ENST00000557041 TOMM20LQ6UXN7 152 aa12.43□□□□□ -0.42
TMEM55B-207ENST00000557041 FAM222BQ8WU58 562 aa12.43□□□□□ -0.42
TMEM55B-207ENST00000557041 A0A087X0M5 115 aa12.43□□□□□ -0.42
TMEM55B-207ENST00000557041 A0A1B0GX30 115 aa12.43□□□□□ -0.42
TMEM55B-207ENST00000557041 IFITM10A6NMD0 228 aa12.43□□□□□ -0.42
TMEM55B-207ENST00000557041 VENTXO95231 258 aa12.43□□□□□ -0.42
TMEM55B-207ENST00000557041 MRPL18Q9H0U6 180 aaKnown RBP12.43□□□□□ -0.42
TMEM55B-207ENST00000557041 KLF2Q9Y5W3 355 aaPredicted RBP12.43□□□□□ -0.42
TMEM55B-207ENST00000557041 EAF1Q96JC9 268 aaPredicted RBP12.42□□□□□ -0.42
TMEM55B-207ENST00000557041 TMEM68Q96MH6 324 aa12.42□□□□□ -0.42
TMEM55B-207ENST00000557041 RAB1BQ9H0U4 201 aa12.42□□□□□ -0.42
TMEM55B-207ENST00000557041 AMBPP02760 352 aa12.42□□□□□ -0.42
TMEM55B-207ENST00000557041 FRMD6-AS1P0C7T7 363 aa12.42□□□□□ -0.42
TMEM55B-207ENST00000557041 CGB3P0DN86 165 aa12.42□□□□□ -0.42
TMEM55B-207ENST00000557041 CGB7P0DN87 165 aa12.42□□□□□ -0.42
TMEM55B-207ENST00000557041 MFAP2P55001 183 aa12.42□□□□□ -0.42
TMEM55B-207ENST00000557041 ZNF672Q499Z4 452 aaPredicted RBP12.42□□□□□ -0.42
TMEM55B-207ENST00000557041 ZNF705AQ6ZN79 300 aaPredicted RBP12.42□□□□□ -0.42
TMEM55B-207ENST00000557041 CLEC7AQ9BXN2 247 aa12.42□□□□□ -0.42
TMEM55B-207ENST00000557041 PARD6GQ9BYG4 376 aaPredicted RBP12.42□□□□□ -0.42
TMEM55B-207ENST00000557041 IGHV3OR16-10A0A075B7F0 116 aa12.42□□□□□ -0.42
TMEM55B-207ENST00000557041 ZNF253O75346 499 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 228.9 ms