RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 UBQLN2Q9UHD9 624 aa16.84■□□□□ 0.29
TMEM260-214ENST00000556975 SCP2D1Q9UJQ7 156 aa16.84■□□□□ 0.29
TMEM260-214ENST00000556975 TMEM56-RWDD3S4R434 201 aa16.84■□□□□ 0.29
TMEM260-214ENST00000556975 FABP12A6NFH5 140 aa16.83■□□□□ 0.28
TMEM260-214ENST00000556975 FAM90A2PQ658T7 463 aa16.83■□□□□ 0.28
TMEM260-214ENST00000556975 ZNF600Q6ZNG1 722 aa16.83■□□□□ 0.28
TMEM260-214ENST00000556975 MCFD2Q8NI22 146 aa16.83■□□□□ 0.28
TMEM260-214ENST00000556975 GPR146Q96CH1 333 aa16.83■□□□□ 0.28
TMEM260-214ENST00000556975 GALNT14Q96FL9 552 aa16.83■□□□□ 0.28
TMEM260-214ENST00000556975 SCGB3A2Q96PL1 93 aa16.83■□□□□ 0.28
TMEM260-214ENST00000556975 OVOL2Q9BRP0 275 aa16.83■□□□□ 0.28
TMEM260-214ENST00000556975 GINS3Q9BRX5 216 aa16.83■□□□□ 0.28
TMEM260-214ENST00000556975 FNDC4Q9H6D8 234 aaPredicted RBP16.83■□□□□ 0.28
TMEM260-214ENST00000556975 CD5P06127 495 aa16.82■□□□□ 0.28
TMEM260-214ENST00000556975 IL22RA2Q969J5 263 aa16.82■□□□□ 0.28
TMEM260-214ENST00000556975 KCNIP3Q9Y2W7 256 aa16.82■□□□□ 0.28
TMEM260-214ENST00000556975 DNAH1Q9P2D7 4330 aa16.81■□□□□ 0.28
TMEM260-214ENST00000556975 HTR2BP41595 481 aa16.81■□□□□ 0.28
TMEM260-214ENST00000556975 APOC4P55056 127 aa16.81■□□□□ 0.28
TMEM260-214ENST00000556975 CMC4P56277 68 aaPredicted RBP16.81■□□□□ 0.28
TMEM260-214ENST00000556975 TMEM268Q5VZI3 342 aa16.81■□□□□ 0.28
TMEM260-214ENST00000556975 Q6ZWC4 215 aa16.81■□□□□ 0.28
TMEM260-214ENST00000556975 OR4X1Q8NH49 305 aa16.81■□□□□ 0.28
TMEM260-214ENST00000556975 TMEM230Q96A57 120 aa16.81■□□□□ 0.28
TMEM260-214ENST00000556975 LYSTQ99698 3801 aa16.81■□□□□ 0.28
TMEM260-214ENST00000556975 VSIRQ9H7M9 311 aa16.81■□□□□ 0.28
TMEM260-214ENST00000556975 ZFAND3Q9H8U3 227 aa16.81■□□□□ 0.28
TMEM260-214ENST00000556975 PUS1Q9Y606 427 aaKnown RBP eCLIP16.81■□□□□ 0.28
TMEM260-214ENST00000556975 IGHV3-49A0A0A0MS15 119 aa16.8■□□□□ 0.28
TMEM260-214ENST00000556975 KIR2DL5BA0A0G2JN68 375 aa16.8■□□□□ 0.28
TMEM260-214ENST00000556975 KIR2DL5BA0A0G2JPC4 375 aa16.8■□□□□ 0.28
TMEM260-214ENST00000556975 LCE6AA0A183 80 aa16.8■□□□□ 0.28
TMEM260-214ENST00000556975 UBE2CO00762 179 aa16.8■□□□□ 0.28
TMEM260-214ENST00000556975 CLN5O75503 358 aa16.8■□□□□ 0.28
TMEM260-214ENST00000556975 BMI1P35226 326 aa16.8■□□□□ 0.28
TMEM260-214ENST00000556975 TMEM187Q14656 261 aa16.8■□□□□ 0.28
TMEM260-214ENST00000556975 MLANAQ16655 118 aa16.8■□□□□ 0.28
TMEM260-214ENST00000556975 WFDC3Q8IUB2 231 aa16.8■□□□□ 0.28
TMEM260-214ENST00000556975 KIR2DL5AQ8N109 375 aa16.8■□□□□ 0.28
TMEM260-214ENST00000556975 KIR2DL5BQ8NHK3 375 aa16.8■□□□□ 0.28
TMEM260-214ENST00000556975 MRPL36Q9P0J6 103 aaKnown RBP16.8■□□□□ 0.28
TMEM260-214ENST00000556975 CACNG5Q9UF02 275 aa16.8■□□□□ 0.28
TMEM260-214ENST00000556975 CACFD1Q9UGQ2 172 aa16.8■□□□□ 0.28
TMEM260-214ENST00000556975 TP53TG1Q9Y2A0 90 aa16.8■□□□□ 0.28
TMEM260-214ENST00000556975 BIRC6Q9NR09 4857 aa16.8■□□□□ 0.28
TMEM260-214ENST00000556975 OPRK1P41145 380 aa16.79■□□□□ 0.28
TMEM260-214ENST00000556975 A0A1B0GU03 582 aa16.78■□□□□ 0.28
TMEM260-214ENST00000556975 C2orf83Q53S99 150 aa16.78■□□□□ 0.28
TMEM260-214ENST00000556975 HEYLQ9NQ87 328 aaPredicted RBP16.78■□□□□ 0.28
TMEM260-214ENST00000556975 IGHV3OR16-13A0A075B7E8 117 aa16.77■□□□□ 0.28
TMEM260-214ENST00000556975 IGHV3-74A0A0B4J1X5 117 aa16.77■□□□□ 0.28
TMEM260-214ENST00000556975 PAFAH1B2P68402 229 aa16.77■□□□□ 0.28
TMEM260-214ENST00000556975 TCF24Q7RTU0 167 aa16.77■□□□□ 0.28
TMEM260-214ENST00000556975 ST8SIA2Q92186 375 aa16.77■□□□□ 0.28
TMEM260-214ENST00000556975 MCUBQ9NWR8 336 aa16.77■□□□□ 0.28
TMEM260-214ENST00000556975 TRAV30A0A087WSZ9 112 aa16.76■□□□□ 0.27
TMEM260-214ENST00000556975 RPS10-NUDT3A0A1W2PQS6 291 aa16.76■□□□□ 0.27
TMEM260-214ENST00000556975 SCGB2A1O75556 95 aa16.76■□□□□ 0.27
TMEM260-214ENST00000556975 APOHP02749 345 aaPredicted RBP16.76■□□□□ 0.27
TMEM260-214ENST00000556975 SUPT4H1P63272 117 aaKnown RBP16.76■□□□□ 0.27
TMEM260-214ENST00000556975 NMSQ5H8A3 153 aa16.76■□□□□ 0.27
TMEM260-214ENST00000556975 LILRB2Q8N423 598 aa16.76■□□□□ 0.27
TMEM260-214ENST00000556975 RNASEH2CQ8TDP1 164 aaKnown RBP16.76■□□□□ 0.27
TMEM260-214ENST00000556975 MAP6D1Q9H9H5 199 aa16.76■□□□□ 0.27
TMEM260-214ENST00000556975 A0A0B4J2A0 478 aa16.75■□□□□ 0.27
TMEM260-214ENST00000556975 SPRY2O43597 315 aa16.75■□□□□ 0.27
TMEM260-214ENST00000556975 IGKV1-17P01599 117 aa16.75■□□□□ 0.27
TMEM260-214ENST00000556975 SULT1A3P0DMM9 295 aa16.75■□□□□ 0.27
TMEM260-214ENST00000556975 SULT1A4P0DMN0 295 aa16.75■□□□□ 0.27
TMEM260-214ENST00000556975 KLF9Q13886 244 aaPredicted RBP16.75■□□□□ 0.27
TMEM260-214ENST00000556975 STPG3Q8N7X2 389 aa16.75■□□□□ 0.27
TMEM260-214ENST00000556975 SLC24A4Q8NFF2 622 aa16.75■□□□□ 0.27
TMEM260-214ENST00000556975 TRIM63Q969Q1 353 aa16.75■□□□□ 0.27
TMEM260-214ENST00000556975 SHPKQ9UHJ6 478 aa16.75■□□□□ 0.27
TMEM260-214ENST00000556975 IGKV3-7A0A075B6H7 116 aa16.74■□□□□ 0.27
TMEM260-214ENST00000556975 TRAV2A0A0B4J234 112 aa16.74■□□□□ 0.27
TMEM260-214ENST00000556975 CEBPZOSA8MTT3 80 aa16.74■□□□□ 0.27
TMEM260-214ENST00000556975 SLC25A4P12235 298 aa16.74■□□□□ 0.27
TMEM260-214ENST00000556975 AKR1C4P17516 323 aa16.74■□□□□ 0.27
TMEM260-214ENST00000556975 NPPCP23582 126 aa16.74■□□□□ 0.27
TMEM260-214ENST00000556975 CRYBB3P26998 211 aa16.74■□□□□ 0.27
TMEM260-214ENST00000556975 FAUP35544 74 aaKnown RBP16.74■□□□□ 0.27
TMEM260-214ENST00000556975 TFPI2P48307 235 aa16.74■□□□□ 0.27
TMEM260-214ENST00000556975 APRG1Q8IVJ8 170 aa16.74■□□□□ 0.27
TMEM260-214ENST00000556975 RNF183Q96D59 192 aa16.74■□□□□ 0.27
TMEM260-214ENST00000556975 TMEM231Q9H6L2 316 aa16.74■□□□□ 0.27
TMEM260-214ENST00000556975 V9GYH0 126 aa16.74■□□□□ 0.27
TMEM260-214ENST00000556975 A0A1W2PS18 150 aa16.73■□□□□ 0.27
TMEM260-214ENST00000556975 DFFBO76075 338 aa16.73■□□□□ 0.27
TMEM260-214ENST00000556975 ANXA3P12429 323 aa16.73■□□□□ 0.27
TMEM260-214ENST00000556975 CCR6P51684 374 aa16.73■□□□□ 0.27
TMEM260-214ENST00000556975 AP3S2P59780 193 aa16.73■□□□□ 0.27
TMEM260-214ENST00000556975 PRSS54Q6PEW0 395 aa16.73■□□□□ 0.27
TMEM260-214ENST00000556975 NOXA1Q86UR1 476 aa16.73■□□□□ 0.27
TMEM260-214ENST00000556975 GBGT1Q8N5D6 347 aa16.73■□□□□ 0.27
TMEM260-214ENST00000556975 TMEM170AQ8WVE7 144 aa16.73■□□□□ 0.27
TMEM260-214ENST00000556975 DEDD2Q8WXF8 326 aa16.73■□□□□ 0.27
TMEM260-214ENST00000556975 PRR13Q9NZ81 148 aa16.73■□□□□ 0.27
TMEM260-214ENST00000556975 IGLC1P0CG04 106 aa16.72■□□□□ 0.27
TMEM260-214ENST00000556975 RPL35AP18077 110 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms