RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 UPK1BO75841 260 aa8.1□□□□□ -1.11
LINC00239-201ENST00000556973 TMEM50AO95807 157 aa8.1□□□□□ -1.11
LINC00239-201ENST00000556973 IFNA21P01568 189 aa8.1□□□□□ -1.11
LINC00239-201ENST00000556973 IGHV3-48P01763 117 aa8.1□□□□□ -1.11
LINC00239-201ENST00000556973 C8orf88P0DMB2 117 aa8.1□□□□□ -1.11
LINC00239-201ENST00000556973 ADMP35318 185 aa8.1□□□□□ -1.11
LINC00239-201ENST00000556973 OPRK1P41145 380 aa8.1□□□□□ -1.11
LINC00239-201ENST00000556973 MLANAQ16655 118 aa8.1□□□□□ -1.11
LINC00239-201ENST00000556973 TM4SF20Q53R12 229 aa8.1□□□□□ -1.11
LINC00239-201ENST00000556973 GGNBP1Q5YKI7 109 aa8.1□□□□□ -1.11
LINC00239-201ENST00000556973 LCN12Q6JVE5 192 aa8.1□□□□□ -1.11
LINC00239-201ENST00000556973 UNQ9165/PRO28630Q6UXU0 137 aa8.1□□□□□ -1.11
LINC00239-201ENST00000556973 DYNLRB2Q8TF09 96 aa8.1□□□□□ -1.11
LINC00239-201ENST00000556973 C20orf85Q9H1P6 137 aa8.1□□□□□ -1.11
LINC00239-201ENST00000556973 RBKSQ9H477 322 aa8.1□□□□□ -1.11
LINC00239-201ENST00000556973 TRAV30A0A087WSZ9 112 aa8.09□□□□□ -1.11
LINC00239-201ENST00000556973 TMEM213A2RRL7 107 aa8.09□□□□□ -1.11
LINC00239-201ENST00000556973 C15orf62A8K5M9 175 aa8.09□□□□□ -1.11
LINC00239-201ENST00000556973 IFNA10P01566 189 aa8.09□□□□□ -1.11
LINC00239-201ENST00000556973 EDN2P20800 178 aa8.09□□□□□ -1.11
LINC00239-201ENST00000556973 NPY1RP25929 384 aa8.09□□□□□ -1.11
LINC00239-201ENST00000556973 ASAH1Q13510 395 aa8.09□□□□□ -1.11
LINC00239-201ENST00000556973 CD300EQ496F6 205 aaPredicted RBP8.09□□□□□ -1.11
LINC00239-201ENST00000556973 ETFRF1Q6IPR1 90 aa8.09□□□□□ -1.11
LINC00239-201ENST00000556973 UXS1Q8NBZ7 420 aa8.09□□□□□ -1.11
LINC00239-201ENST00000556973 OR4X1Q8NH49 305 aa8.09□□□□□ -1.11
LINC00239-201ENST00000556973 MITD1Q8WV92 249 aa8.09□□□□□ -1.11
LINC00239-201ENST00000556973 TMEM190Q8WZ59 177 aa8.09□□□□□ -1.11
LINC00239-201ENST00000556973 FNDC4Q9H6D8 234 aaPredicted RBP8.09□□□□□ -1.11
LINC00239-201ENST00000556973 DAZ1Q9NQZ3 744 aaKnown RBP8.09□□□□□ -1.11
LINC00239-201ENST00000556973 TBC1D24Q9ULP9 559 aa8.09□□□□□ -1.11
LINC00239-201ENST00000556973 SMAD5-AS1Q9Y6J3 95 aa8.09□□□□□ -1.11
LINC00239-201ENST00000556973 DNAH3Q8TD57 4116 aa8.08□□□□□ -1.12
LINC00239-201ENST00000556973 TRAV6A0A075B6T7 132 aa8.08□□□□□ -1.12
LINC00239-201ENST00000556973 CLN5O75503 358 aa8.08□□□□□ -1.12
LINC00239-201ENST00000556973 SCGB2A1O75556 95 aa8.08□□□□□ -1.12
LINC00239-201ENST00000556973 ADAP1O75689 374 aa8.08□□□□□ -1.12
LINC00239-201ENST00000556973 YIF1AO95070 293 aa8.08□□□□□ -1.12
LINC00239-201ENST00000556973 H2AFB2P0C5Z0 115 aa8.08□□□□□ -1.12
LINC00239-201ENST00000556973 SLC25A4P12235 298 aa8.08□□□□□ -1.12
LINC00239-201ENST00000556973 TMEM170AQ8WVE7 144 aa8.08□□□□□ -1.12
LINC00239-201ENST00000556973 OR10C1Q96KK4 312 aa8.08□□□□□ -1.12
LINC00239-201ENST00000556973 CIB3Q96Q77 187 aaPredicted RBP8.08□□□□□ -1.12
LINC00239-201ENST00000556973 B9D2Q9BPU9 175 aa8.08□□□□□ -1.12
LINC00239-201ENST00000556973 IZUMO1RA6ND01 250 aa8.07□□□□□ -1.12
LINC00239-201ENST00000556973 ZNF785A8K8V0 405 aa8.07□□□□□ -1.12
LINC00239-201ENST00000556973 SYNGR2O43760 224 aa8.07□□□□□ -1.12
LINC00239-201ENST00000556973 GPX4P36969 197 aaPredicted RBP8.07□□□□□ -1.12
LINC00239-201ENST00000556973 RPP30P78346 268 aaKnown RBP8.07□□□□□ -1.12
LINC00239-201ENST00000556973 ID3Q02535 119 aa8.07□□□□□ -1.12
LINC00239-201ENST00000556973 CD69Q07108 199 aa8.07□□□□□ -1.12
LINC00239-201ENST00000556973 GTSCR1Q86UQ5 136 aa8.07□□□□□ -1.12
LINC00239-201ENST00000556973 Q8N1Y9 231 aa8.07□□□□□ -1.12
LINC00239-201ENST00000556973 TMEM116Q8NCL8 245 aa8.07□□□□□ -1.12
LINC00239-201ENST00000556973 OR52B4Q8NGK2 314 aa8.07□□□□□ -1.12
LINC00239-201ENST00000556973 CACNG8Q8WXS5 425 aa8.07□□□□□ -1.12
LINC00239-201ENST00000556973 C20orf24Q9BUV8 137 aa8.07□□□□□ -1.12
LINC00239-201ENST00000556973 NUDT15Q9NV35 164 aa8.07□□□□□ -1.12
LINC00239-201ENST00000556973 MLXQ9UH92 298 aa8.07□□□□□ -1.12
LINC00239-201ENST00000556973 TRAV14DV4A0A0A6YYC5 116 aa8.06□□□□□ -1.12
LINC00239-201ENST00000556973 TRAV25A0A0B4J276 109 aa8.06□□□□□ -1.12
LINC00239-201ENST00000556973 MPTX1A8MV57 137 aa8.06□□□□□ -1.12
LINC00239-201ENST00000556973 IFNA4P05014 189 aa8.06□□□□□ -1.12
LINC00239-201ENST00000556973 RAB11AP62491 216 aa8.06□□□□□ -1.12
LINC00239-201ENST00000556973 IFITM3Q01628 133 aa8.06□□□□□ -1.12
LINC00239-201ENST00000556973 C11orf87Q6NUJ2 197 aa8.06□□□□□ -1.12
LINC00239-201ENST00000556973 PRSS54Q6PEW0 395 aa8.06□□□□□ -1.12
LINC00239-201ENST00000556973 TOMM20LQ6UXN7 152 aa8.06□□□□□ -1.12
LINC00239-201ENST00000556973 ZNF600Q6ZNG1 722 aa8.06□□□□□ -1.12
LINC00239-201ENST00000556973 RBPMS2Q6ZRY4 209 aaKnown RBP8.06□□□□□ -1.12
LINC00239-201ENST00000556973 ZNF431Q8TF32 576 aaPredicted RBP8.06□□□□□ -1.12
LINC00239-201ENST00000556973 ZNF414Q96IQ9 312 aa8.06□□□□□ -1.12
LINC00239-201ENST00000556973 MAGT1Q9H0U3 335 aa8.06□□□□□ -1.12
LINC00239-201ENST00000556973 MRPL36Q9P0J6 103 aaKnown RBP8.06□□□□□ -1.12
LINC00239-201ENST00000556973 SMPXQ9UHP9 88 aa8.06□□□□□ -1.12
LINC00239-201ENST00000556973 SORL1Q92673 2214 aa8.06□□□□□ -1.12
LINC00239-201ENST00000556973 IGHV3OR16-8A0A075B7F1 116 aa8.05□□□□□ -1.12
LINC00239-201ENST00000556973 A8MZ25 164 aa8.05□□□□□ -1.12
LINC00239-201ENST00000556973 WRBO00258 174 aa8.05□□□□□ -1.12
LINC00239-201ENST00000556973 ZNF207O43670 478 aaKnown RBP8.05□□□□□ -1.12
LINC00239-201ENST00000556973 NHLRC4P0CG21 123 aaPredicted RBP8.05□□□□□ -1.12
LINC00239-201ENST00000556973 IAPPP10997 89 aa8.05□□□□□ -1.12
LINC00239-201ENST00000556973 NKX2-1P43699 371 aaPredicted RBP8.05□□□□□ -1.12
LINC00239-201ENST00000556973 DEFA1P59665 94 aa8.05□□□□□ -1.12
LINC00239-201ENST00000556973 DEFA3P59666 94 aa8.05□□□□□ -1.12
LINC00239-201ENST00000556973 GUCA2BQ16661 112 aa8.05□□□□□ -1.12
LINC00239-201ENST00000556973 IAH1Q2TAA2 248 aaPredicted RBP8.05□□□□□ -1.12
LINC00239-201ENST00000556973 LAMTOR1Q6IAA8 161 aa8.05□□□□□ -1.12
LINC00239-201ENST00000556973 BTNL8Q6UX41 500 aa8.05□□□□□ -1.12
LINC00239-201ENST00000556973 TMEM61Q8N0U2 210 aa8.05□□□□□ -1.12
LINC00239-201ENST00000556973 OR4D5Q8NGN0 318 aa8.05□□□□□ -1.12
LINC00239-201ENST00000556973 OR1S2Q8NGQ3 325 aa8.05□□□□□ -1.12
LINC00239-201ENST00000556973 ENKURQ8TC29 256 aa8.05□□□□□ -1.12
LINC00239-201ENST00000556973 NPIPB3Q92617 1050 aa8.05□□□□□ -1.12
LINC00239-201ENST00000556973 WDR89Q96FK6 387 aaPredicted RBP8.05□□□□□ -1.12
LINC00239-201ENST00000556973 GINS3Q9BRX5 216 aa8.05□□□□□ -1.12
LINC00239-201ENST00000556973 PUS1Q9Y606 427 aaKnown RBP eCLIP8.05□□□□□ -1.12
LINC00239-201ENST00000556973 PRKDCP78527 4128 aaKnown RBP8.04□□□□□ -1.12
LINC00239-201ENST00000556973 IGHV7-4-1A0A0J9YVY3 117 aa8.04□□□□□ -1.12
LINC00239-201ENST00000556973 CHEK1O14757 476 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms