RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 GOSR2O14653 212 aa13.34□□□□□ -0.27
SHMT2-225ENST00000556798 GNG7O60262 68 aa13.34□□□□□ -0.27
SHMT2-225ENST00000556798 PRB2P02812 416 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-225ENST00000556798 EDN2P20800 178 aa13.34□□□□□ -0.27
SHMT2-225ENST00000556798 TATDN3Q17R31 274 aa13.34□□□□□ -0.27
SHMT2-225ENST00000556798 KPRPQ5T749 579 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-225ENST00000556798 GSG1LQ6UXU4 331 aa13.34□□□□□ -0.27
SHMT2-225ENST00000556798 GPHB5Q86YW7 130 aa13.34□□□□□ -0.27
SHMT2-225ENST00000556798 RNASEH2CQ8TDP1 164 aaKnown RBP13.34□□□□□ -0.27
SHMT2-225ENST00000556798 CIB3Q96Q77 187 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-225ENST00000556798 OR4C12Q96R67 309 aa13.34□□□□□ -0.27
SHMT2-225ENST00000556798 MEGF8Q7Z7M0 2845 aa13.33□□□□□ -0.28
SHMT2-225ENST00000556798 ZNF320A2RRD8 509 aa13.33□□□□□ -0.28
SHMT2-225ENST00000556798 SIX6O95475 246 aa13.33□□□□□ -0.28
SHMT2-225ENST00000556798 MBPP02686 304 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-225ENST00000556798 IFNA4P05014 189 aa13.33□□□□□ -0.28
SHMT2-225ENST00000556798 CTSGP08311 255 aa13.33□□□□□ -0.28
SHMT2-225ENST00000556798 FCGR2BP31994 310 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-225ENST00000556798 KRTAP10-11P60412 298 aa13.33□□□□□ -0.28
SHMT2-225ENST00000556798 SPANXN5Q5MJ07 72 aa13.33□□□□□ -0.28
SHMT2-225ENST00000556798 SPSB3Q6PJ21 355 aa13.33□□□□□ -0.28
SHMT2-225ENST00000556798 UNQ9165/PRO28630Q6UXU0 137 aa13.33□□□□□ -0.28
SHMT2-225ENST00000556798 IL34Q6ZMJ4 242 aa13.33□□□□□ -0.28
SHMT2-225ENST00000556798 NOXA1Q86UR1 476 aa13.33□□□□□ -0.28
SHMT2-225ENST00000556798 C2orf50Q96LR7 162 aa13.33□□□□□ -0.28
SHMT2-225ENST00000556798 ATP6V0BQ99437 205 aa13.33□□□□□ -0.28
SHMT2-225ENST00000556798 TXN2Q99757 166 aa13.33□□□□□ -0.28
SHMT2-225ENST00000556798 ELOVL1Q9BW60 279 aa13.33□□□□□ -0.28
SHMT2-225ENST00000556798 RCL1Q9Y2P8 373 aaKnown RBP13.33□□□□□ -0.28
SHMT2-225ENST00000556798 RPS10-NUDT3A0A1W2PQS6 291 aa13.32□□□□□ -0.28
SHMT2-225ENST00000556798 NUPL2O15504 423 aaKnown RBP13.32□□□□□ -0.28
SHMT2-225ENST00000556798 CSN3P07498 182 aa13.32□□□□□ -0.28
SHMT2-225ENST00000556798 NPBWR1P48145 328 aa13.32□□□□□ -0.28
SHMT2-225ENST00000556798 FAM106AQ4KMX7 169 aa13.32□□□□□ -0.28
SHMT2-225ENST00000556798 SLC16A13Q7RTY0 426 aa13.32□□□□□ -0.28
SHMT2-225ENST00000556798 REC114Q7Z4M0 266 aa13.32□□□□□ -0.28
SHMT2-225ENST00000556798 ZNF414Q96IQ9 312 aa13.32□□□□□ -0.28
SHMT2-225ENST00000556798 ZNF436Q9C0F3 470 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-225ENST00000556798 GAR1Q9NY12 217 aaKnown RBP13.32□□□□□ -0.28
SHMT2-225ENST00000556798 PEMTQ9UBM1 199 aa13.32□□□□□ -0.28
SHMT2-225ENST00000556798 LSM5Q9Y4Y9 91 aaKnown RBP13.32□□□□□ -0.28
SHMT2-225ENST00000556798 DNAH3Q8TD57 4116 aa13.31□□□□□ -0.28
SHMT2-225ENST00000556798 IGHV3OR16-8A0A075B7F1 116 aa13.31□□□□□ -0.28
SHMT2-225ENST00000556798 LGALS9O00182 355 aa13.31□□□□□ -0.28
SHMT2-225ENST00000556798 WIPF1O43516 503 aa13.31□□□□□ -0.28
SHMT2-225ENST00000556798 SSNA1O43805 119 aa13.31□□□□□ -0.28
SHMT2-225ENST00000556798 TMEM50AO95807 157 aa13.31□□□□□ -0.28
SHMT2-225ENST00000556798 RND2P52198 227 aa13.31□□□□□ -0.28
SHMT2-225ENST00000556798 RAB11AP62491 216 aa13.31□□□□□ -0.28
SHMT2-225ENST00000556798 DEFA6Q01524 100 aa13.31□□□□□ -0.28
SHMT2-225ENST00000556798 CD69Q07108 199 aa13.31□□□□□ -0.28
SHMT2-225ENST00000556798 RGS21Q2M5E4 152 aa13.31□□□□□ -0.28
SHMT2-225ENST00000556798 PRSS54Q6PEW0 395 aa13.31□□□□□ -0.28
SHMT2-225ENST00000556798 OR4X1Q8NH49 305 aa13.31□□□□□ -0.28
SHMT2-225ENST00000556798 CACNG8Q8WXS5 425 aa13.31□□□□□ -0.28
SHMT2-225ENST00000556798 PSENENQ9NZ42 101 aa13.31□□□□□ -0.28
SHMT2-225ENST00000556798 ALG5Q9Y673 324 aa13.31□□□□□ -0.28
SHMT2-225ENST00000556798 SORL1Q92673 2214 aa13.31□□□□□ -0.28
SHMT2-225ENST00000556798 TMEM213A2RRL7 107 aa13.3□□□□□ -0.28
SHMT2-225ENST00000556798 C7orf66A4D0T2 115 aa13.3□□□□□ -0.28
SHMT2-225ENST00000556798 K7EPK0 472 aa13.3□□□□□ -0.28
SHMT2-225ENST00000556798 CLN5O75503 358 aa13.3□□□□□ -0.28
SHMT2-225ENST00000556798 INSL3P51460 131 aa13.3□□□□□ -0.28
SHMT2-225ENST00000556798 PAX9P55771 341 aa13.3□□□□□ -0.28
SHMT2-225ENST00000556798 ATP5IP56385 69 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-225ENST00000556798 S100A10P60903 97 aa13.3□□□□□ -0.28
SHMT2-225ENST00000556798 EGFEM1PQ0D2K5 195 aa13.3□□□□□ -0.28
SHMT2-225ENST00000556798 TM4SF20Q53R12 229 aa13.3□□□□□ -0.28
SHMT2-225ENST00000556798 ETFRF1Q6IPR1 90 aa13.3□□□□□ -0.28
SHMT2-225ENST00000556798 ADAMTSL5Q6ZMM2 481 aa13.3□□□□□ -0.28
SHMT2-225ENST00000556798 TMEM190Q8WZ59 177 aa13.3□□□□□ -0.28
SHMT2-225ENST00000556798 ACY3Q96HD9 319 aa13.3□□□□□ -0.28
SHMT2-225ENST00000556798 STRAPQ9Y3F4 350 aaKnown RBP13.3□□□□□ -0.28
SHMT2-225ENST00000556798 SELENOKQ9Y6D0 94 aa13.3□□□□□ -0.28
SHMT2-225ENST00000556798 C2orf70A6NJV1 201 aa13.29□□□□□ -0.28
SHMT2-225ENST00000556798 A8MWP6 167 aa13.29□□□□□ -0.28
SHMT2-225ENST00000556798 NDUFA4O00483 81 aa13.29□□□□□ -0.28
SHMT2-225ENST00000556798 SLC25A4P12235 298 aa13.29□□□□□ -0.28
SHMT2-225ENST00000556798 RPP30P78346 268 aaKnown RBP13.29□□□□□ -0.28
SHMT2-225ENST00000556798 RELQ04864 619 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-225ENST00000556798 SMIM8Q96KF7 97 aa13.29□□□□□ -0.28
SHMT2-225ENST00000556798 RAB40CQ96S21 281 aa13.29□□□□□ -0.28
SHMT2-225ENST00000556798 C20orf24Q9BUV8 137 aa13.29□□□□□ -0.28
SHMT2-225ENST00000556798 ZNF207O43670 478 aaKnown RBP13.28□□□□□ -0.28
SHMT2-225ENST00000556798 CCNKO75909 580 aa13.28□□□□□ -0.28
SHMT2-225ENST00000556798 YIF1AO95070 293 aa13.28□□□□□ -0.28
SHMT2-225ENST00000556798 LY86O95711 162 aa13.28□□□□□ -0.28
SHMT2-225ENST00000556798 IL15RAQ13261 267 aa13.28□□□□□ -0.28
SHMT2-225ENST00000556798 RAB32Q13637 225 aa13.28□□□□□ -0.28
SHMT2-225ENST00000556798 TIGITQ495A1 244 aa13.28□□□□□ -0.28
SHMT2-225ENST00000556798 NPIPB3Q92617 1050 aa13.28□□□□□ -0.28
SHMT2-225ENST00000556798 AURKAIP1Q9NWT8 199 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-225ENST00000556798 MGAT4CQ9UBM8 478 aa13.28□□□□□ -0.28
SHMT2-225ENST00000556798 PRSS46E5RG02 174 aa13.27□□□□□ -0.29
SHMT2-225ENST00000556798 L7N2F9 121 aa13.27□□□□□ -0.29
SHMT2-225ENST00000556798 IGLV1-51P01701 117 aa13.27□□□□□ -0.29
SHMT2-225ENST00000556798 FOLR2P14207 255 aa13.27□□□□□ -0.29
SHMT2-225ENST00000556798 OR10J1P30954 320 aa13.27□□□□□ -0.29
SHMT2-225ENST00000556798 VAMP2P63027 116 aa13.27□□□□□ -0.29
SHMT2-225ENST00000556798 TMEM116Q8NCL8 245 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms