RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, human

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-222	ENST00000556768	C15orf62	A8K5M9	175 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768		K7EMT4	169 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	CORT	O00230	105 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	GNG7	O60262	68 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	CD74	P04233	296 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	CD5	P06127	495 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	CTSD	P07339	412 aa	Predicted RBP	5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	CD7	P09564	240 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	AKAIN1	P0CW23	69 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	GCSH	P23434	173 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	SPCS2	Q15005	226 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	SURF2	Q15527	256 aa	Predicted RBP	5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	LHFPL1	Q86WI0	220 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	FAM219A	Q8IW50	185 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	DUSP18	Q8NEJ0	188 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	SMIM4	Q8WVI0	70 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	TMEM190	Q8WZ59	177 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	SPAG8	Q99932	426 aa	Predicted RBP	5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	GINS3	Q9BRX5	216 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	ZNF436	Q9C0F3	470 aa	Predicted RBP	5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	MLX	Q9UH92	298 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	TRAV14DV4	A0A0A6YYC5	116 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	FABP12	A6NFH5	140 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	OR4C46	A6NHA9	309 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	DBX1	A6NMT0	343 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768		K7EIM0	57 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	CTDSPL	O15194	276 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	MT-CO2	P00403	227 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	CTSG	P08311	255 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	C8orf88	P0DMB2	117 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	HOXA1	P49639	335 aa	Predicted RBP	5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	CMC4	P56277	68 aa	Predicted RBP	5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	PAFAH1B2	P68402	229 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	DHODH	Q02127	395 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	SP6	Q3SY56	376 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	CASC10	Q5T4H9	136 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	ZNF114	Q8NC26	417 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	OR13C8	Q8NGS7	320 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	MARCH1	Q8TCQ1	289 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	TP53RK	Q96S44	253 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	HIPK2	Q9H2X6	1198 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	MCUB	Q9NWR8	336 aa		5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	CCDC59	Q9P031	241 aa	Known RBP	5.51	□□□□□ -1.53
SCFD1-222	ENST00000556768	HUWE1	Q7Z6Z7	4374 aa	Known RBP	5.5	□□□□□ -1.53
SCFD1-222	ENST00000556768	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	5.5	□□□□□ -1.53
SCFD1-222	ENST00000556768		A0A0B4J293	547 aa		5.5	□□□□□ -1.53
SCFD1-222	ENST00000556768	CCDC160	A6NGH7	325 aa		5.5	□□□□□ -1.53
SCFD1-222	ENST00000556768	TSPAN4	O14817	238 aa		5.5	□□□□□ -1.53
SCFD1-222	ENST00000556768	IGKV1-39	P01597	117 aa		5.5	□□□□□ -1.53
SCFD1-222	ENST00000556768	IGKV1D-39	P04432	117 aa		5.5	□□□□□ -1.53
SCFD1-222	ENST00000556768	ANXA3	P12429	323 aa		5.5	□□□□□ -1.53
SCFD1-222	ENST00000556768	FCGR2B	P31994	310 aa	Predicted RBP	5.5	□□□□□ -1.53
SCFD1-222	ENST00000556768	S100A5	P33763	92 aa		5.5	□□□□□ -1.53
SCFD1-222	ENST00000556768	FAU	P35544	74 aa	Known RBP	5.5	□□□□□ -1.53
SCFD1-222	ENST00000556768	MFAP2	P55001	183 aa		5.5	□□□□□ -1.53
SCFD1-222	ENST00000556768	AP3S2	P59780	193 aa		5.5	□□□□□ -1.53
SCFD1-222	ENST00000556768	OR4D10	Q8NGI6	311 aa		5.5	□□□□□ -1.53
SCFD1-222	ENST00000556768	RBPMS	Q93062	196 aa	Known RBP	5.5	□□□□□ -1.53
SCFD1-222	ENST00000556768	CHRDL1	Q9BU40	450 aa		5.5	□□□□□ -1.53
SCFD1-222	ENST00000556768	TMEM222	Q9H0R3	208 aa		5.5	□□□□□ -1.53
SCFD1-222	ENST00000556768	MIXL1	Q9H2W2	232 aa		5.5	□□□□□ -1.53
SCFD1-222	ENST00000556768		I3L2K1	104 aa		5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	ST8SIA3	O43173	380 aa		5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	CDS2	O95674	445 aa		5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	EDN2	P20800	178 aa		5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	UCP1	P25874	307 aa		5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	ETV6	P41212	452 aa		5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	HTR2B	P41595	481 aa		5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	APOC4	P55056	127 aa		5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	FAM3B	P58499	235 aa	Predicted RBP	5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	SPCS3	P61009	180 aa		5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	NOXA1	Q86UR1	476 aa		5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	TMEM116	Q8NCL8	245 aa		5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	OR51S1	Q8NGJ8	323 aa		5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	MCFD2	Q8NI22	146 aa		5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	DYNC2LI1	Q8TCX1	351 aa		5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	NARS2	Q96I59	477 aa	Known RBP	5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	GGTLC1	Q9BX51	225 aa		5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	NXF2	Q9GZY0	626 aa	Known RBP	5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	NAA60	Q9H7X0	242 aa		5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	SELENOK	Q9Y6D0	94 aa		5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	DNAH7	Q8WXX0	4024 aa		5.49	□□□□□ -1.53
SCFD1-222	ENST00000556768	IGHV3OR16-8	A0A075B7F1	116 aa		5.48	□□□□□ -1.53
SCFD1-222	ENST00000556768	RPS10-NUDT3	A0A1W2PQS6	291 aa		5.48	□□□□□ -1.53
SCFD1-222	ENST00000556768	RBMY1B	A6NDE4	496 aa	Known RBP	5.48	□□□□□ -1.53
SCFD1-222	ENST00000556768	RBMY1E	A6NEQ0	496 aa	Known RBP	5.48	□□□□□ -1.53
SCFD1-222	ENST00000556768	C9orf118	A6NHY6	69 aa		5.48	□□□□□ -1.53
SCFD1-222	ENST00000556768	INS-IGF2	F8WCM5	200 aa		5.48	□□□□□ -1.53
SCFD1-222	ENST00000556768	ZNF207	O43670	478 aa	Known RBP	5.48	□□□□□ -1.53
SCFD1-222	ENST00000556768	IGKV1-5	P01602	117 aa		5.48	□□□□□ -1.53
SCFD1-222	ENST00000556768	OR5AC1	P0C628	307 aa		5.48	□□□□□ -1.53
SCFD1-222	ENST00000556768	RBMY1D	P0C7P1	496 aa	Known RBP	5.48	□□□□□ -1.53
SCFD1-222	ENST00000556768	OPRK1	P41145	380 aa		5.48	□□□□□ -1.53
SCFD1-222	ENST00000556768	IZUMO4	Q1ZYL8	232 aa		5.48	□□□□□ -1.53
SCFD1-222	ENST00000556768	SPINK9	Q5DT21	86 aa		5.48	□□□□□ -1.53
SCFD1-222	ENST00000556768	TMEM268	Q5VZI3	342 aa		5.48	□□□□□ -1.53
SCFD1-222	ENST00000556768	FAAP20	Q6NZ36	180 aa		5.48	□□□□□ -1.53
SCFD1-222	ENST00000556768	LINC00322	Q6ZN03	302 aa	Predicted RBP	5.48	□□□□□ -1.53
SCFD1-222	ENST00000556768	OR4C16	Q8NGL9	310 aa		5.48	□□□□□ -1.53

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