RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 ASAH1Q13510 395 aa12.97□□□□□ -0.33
PSEN1-217ENST00000556533 BSXQ3C1V8 233 aa12.97□□□□□ -0.33
PSEN1-217ENST00000556533 PVRIGQ6DKI7 326 aa12.97□□□□□ -0.33
PSEN1-217ENST00000556533 UXS1Q8NBZ7 420 aa12.97□□□□□ -0.33
PSEN1-217ENST00000556533 ATP6V0BQ99437 205 aa12.97□□□□□ -0.33
PSEN1-217ENST00000556533 ZNF436Q9C0F3 470 aaPredicted RBP12.97□□□□□ -0.33
PSEN1-217ENST00000556533 SIGLEC8Q9NYZ4 499 aa12.97□□□□□ -0.33
PSEN1-217ENST00000556533 UFC1Q9Y3C8 167 aa12.97□□□□□ -0.33
PSEN1-217ENST00000556533 ZNF207O43670 478 aaKnown RBP12.96□□□□□ -0.33
PSEN1-217ENST00000556533 PITX3O75364 302 aa12.96□□□□□ -0.33
PSEN1-217ENST00000556533 IAPPP10997 89 aa12.96□□□□□ -0.33
PSEN1-217ENST00000556533 SLC25A6P12236 298 aa12.96□□□□□ -0.33
PSEN1-217ENST00000556533 NPY1RP25929 384 aa12.96□□□□□ -0.33
PSEN1-217ENST00000556533 IFITM3Q01628 133 aa12.96□□□□□ -0.33
PSEN1-217ENST00000556533 C2orf83Q53S99 150 aa12.96□□□□□ -0.33
PSEN1-217ENST00000556533 FNDC4Q9H6D8 234 aaPredicted RBP12.96□□□□□ -0.33
PSEN1-217ENST00000556533 PAIP2BQ9ULR5 123 aaKnown RBP12.96□□□□□ -0.33
PSEN1-217ENST00000556533 RPS10-NUDT3A0A1W2PQS6 291 aa12.95□□□□□ -0.34
PSEN1-217ENST00000556533 TMEM213A2RRL7 107 aa12.95□□□□□ -0.34
PSEN1-217ENST00000556533 IZUMO1RA6ND01 250 aa12.95□□□□□ -0.34
PSEN1-217ENST00000556533 MPTX1A8MV57 137 aa12.95□□□□□ -0.34
PSEN1-217ENST00000556533 NDUFA4O00483 81 aa12.95□□□□□ -0.34
PSEN1-217ENST00000556533 RELQ04864 619 aaPredicted RBP12.95□□□□□ -0.34
PSEN1-217ENST00000556533 DEFB114Q30KQ6 69 aa12.95□□□□□ -0.34
PSEN1-217ENST00000556533 CD300EQ496F6 205 aaPredicted RBP12.95□□□□□ -0.34
PSEN1-217ENST00000556533 LCN12Q6JVE5 192 aa12.95□□□□□ -0.34
PSEN1-217ENST00000556533 NOXA1Q86UR1 476 aa12.95□□□□□ -0.34
PSEN1-217ENST00000556533 ENKURQ8TC29 256 aa12.95□□□□□ -0.34
PSEN1-217ENST00000556533 TMEM170AQ8WVE7 144 aa12.95□□□□□ -0.34
PSEN1-217ENST00000556533 SEC22CQ9BRL7 303 aa12.95□□□□□ -0.34
PSEN1-217ENST00000556533 MRPL36Q9P0J6 103 aaKnown RBP12.95□□□□□ -0.34
PSEN1-217ENST00000556533 U3KQ87 197 aa12.95□□□□□ -0.34
PSEN1-217ENST00000556533 A8MWP6 167 aa12.94□□□□□ -0.34
PSEN1-217ENST00000556533 MED6O75586 246 aa12.94□□□□□ -0.34
PSEN1-217ENST00000556533 IFNA4P05014 189 aa12.94□□□□□ -0.34
PSEN1-217ENST00000556533 FCGR2BP31994 310 aaPredicted RBP12.94□□□□□ -0.34
PSEN1-217ENST00000556533 GUCA2BQ16661 112 aa12.94□□□□□ -0.34
PSEN1-217ENST00000556533 RNASEH2CQ8TDP1 164 aaKnown RBP12.94□□□□□ -0.34
PSEN1-217ENST00000556533 MITD1Q8WV92 249 aa12.94□□□□□ -0.34
PSEN1-217ENST00000556533 TMEM190Q8WZ59 177 aa12.94□□□□□ -0.34
PSEN1-217ENST00000556533 FAM90A26D6RGX4 464 aa12.93□□□□□ -0.34
PSEN1-217ENST00000556533 WRBO00258 174 aa12.93□□□□□ -0.34
PSEN1-217ENST00000556533 TMEM50AO95807 157 aa12.93□□□□□ -0.34
PSEN1-217ENST00000556533 ELLP55199 621 aaPredicted RBP12.93□□□□□ -0.34
PSEN1-217ENST00000556533 DCTN2Q13561 401 aaKnown RBP12.93□□□□□ -0.34
PSEN1-217ENST00000556533 TECRQ9NZ01 308 aaKnown RBP12.93□□□□□ -0.34
PSEN1-217ENST00000556533 GSKIPQ9P0R6 139 aa12.93□□□□□ -0.34
PSEN1-217ENST00000556533 MLXQ9UH92 298 aa12.93□□□□□ -0.34
PSEN1-217ENST00000556533 LSM4Q9Y4Z0 139 aaKnown RBP12.93□□□□□ -0.34
PSEN1-217ENST00000556533 SYNGR2O43760 224 aa12.92□□□□□ -0.34
PSEN1-217ENST00000556533 CLN5O75503 358 aa12.92□□□□□ -0.34
PSEN1-217ENST00000556533 RND2P52198 227 aa12.92□□□□□ -0.34
PSEN1-217ENST00000556533 IAH1Q2TAA2 248 aaPredicted RBP12.92□□□□□ -0.34
PSEN1-217ENST00000556533 BTNL8Q6UX41 500 aa12.92□□□□□ -0.34
PSEN1-217ENST00000556533 OR2K2Q8NGT1 345 aa12.92□□□□□ -0.34
PSEN1-217ENST00000556533 OR4X1Q8NH49 305 aa12.92□□□□□ -0.34
PSEN1-217ENST00000556533 ZNF431Q8TF32 576 aaPredicted RBP12.92□□□□□ -0.34
PSEN1-217ENST00000556533 MARC2Q969Z3 335 aa12.92□□□□□ -0.34
PSEN1-217ENST00000556533 ACY3Q96HD9 319 aa12.92□□□□□ -0.34
PSEN1-217ENST00000556533 DAZ1Q9NQZ3 744 aaKnown RBP12.92□□□□□ -0.34
PSEN1-217ENST00000556533 MRPL27Q9P0M9 148 aaKnown RBP12.92□□□□□ -0.34
PSEN1-217ENST00000556533 IGHV3-49A0A0A0MS15 119 aa12.91□□□□□ -0.34
PSEN1-217ENST00000556533 FAM25EA8MYX2 175 aa12.91□□□□□ -0.34
PSEN1-217ENST00000556533 SCGB2A1O75556 95 aa12.91□□□□□ -0.34
PSEN1-217ENST00000556533 SCGB1D2O95969 90 aa12.91□□□□□ -0.34
PSEN1-217ENST00000556533 SLC25A4P12235 298 aa12.91□□□□□ -0.34
PSEN1-217ENST00000556533 TIGITQ495A1 244 aa12.91□□□□□ -0.34
PSEN1-217ENST00000556533 ETFRF1Q6IPR1 90 aa12.91□□□□□ -0.34
PSEN1-217ENST00000556533 PRSS54Q6PEW0 395 aa12.91□□□□□ -0.34
PSEN1-217ENST00000556533 TOMM20LQ6UXN7 152 aa12.91□□□□□ -0.34
PSEN1-217ENST00000556533 C12orf45Q8N5I9 185 aaPredicted RBP12.91□□□□□ -0.34
PSEN1-217ENST00000556533 WDR89Q96FK6 387 aaPredicted RBP12.91□□□□□ -0.34
PSEN1-217ENST00000556533 OR10C1Q96KK4 312 aa12.91□□□□□ -0.34
PSEN1-217ENST00000556533 SMAD5-AS1Q9Y6J3 95 aa12.91□□□□□ -0.34
PSEN1-217ENST00000556533 C15orf62A8K5M9 175 aa12.9□□□□□ -0.34
PSEN1-217ENST00000556533 K7EMT4 169 aa12.9□□□□□ -0.34
PSEN1-217ENST00000556533 CCSO14618 274 aa12.9□□□□□ -0.34
PSEN1-217ENST00000556533 SCAF4O95104 1147 aaKnown RBP12.9□□□□□ -0.34
PSEN1-217ENST00000556533 C8orf88P0DMB2 117 aa12.9□□□□□ -0.34
PSEN1-217ENST00000556533 NKX2-1P43699 371 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-217ENST00000556533 ATP5IP56385 69 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-217ENST00000556533 DEFA1P59665 94 aa12.9□□□□□ -0.34
PSEN1-217ENST00000556533 DEFA3P59666 94 aa12.9□□□□□ -0.34
PSEN1-217ENST00000556533 POLR2GP62487 172 aaKnown RBP eCLIP12.9□□□□□ -0.34
PSEN1-217ENST00000556533 RAB11AP62491 216 aa12.9□□□□□ -0.34
PSEN1-217ENST00000556533 RPP30P78346 268 aaKnown RBP12.9□□□□□ -0.34
PSEN1-217ENST00000556533 CD69Q07108 199 aa12.9□□□□□ -0.34
PSEN1-217ENST00000556533 SPANXN5Q5MJ07 72 aa12.9□□□□□ -0.34
PSEN1-217ENST00000556533 ZNF600Q6ZNG1 722 aa12.9□□□□□ -0.34
PSEN1-217ENST00000556533 RBPMS2Q6ZRY4 209 aaKnown RBP12.9□□□□□ -0.34
PSEN1-217ENST00000556533 NRARPQ7Z6K4 114 aa12.9□□□□□ -0.34
PSEN1-217ENST00000556533 GTSCR1Q86UQ5 136 aa12.9□□□□□ -0.34
PSEN1-217ENST00000556533 NPIPB3Q92617 1050 aa12.9□□□□□ -0.34
PSEN1-217ENST00000556533 CIB3Q96Q77 187 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-217ENST00000556533 PUS1Q9Y606 427 aaKnown RBP eCLIP12.9□□□□□ -0.34
PSEN1-217ENST00000556533 PRKDCP78527 4128 aaKnown RBP12.9□□□□□ -0.34
PSEN1-217ENST00000556533 IGHV3OR16-13A0A075B7E8 117 aa12.89□□□□□ -0.35
PSEN1-217ENST00000556533 TRAV30A0A087WSZ9 112 aa12.89□□□□□ -0.35
PSEN1-217ENST00000556533 TRAV14DV4A0A0A6YYC5 116 aa12.89□□□□□ -0.35
PSEN1-217ENST00000556533 IGHV3-74A0A0B4J1X5 117 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms